RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A DBP9Q06218 594 aaKnown RBP-0.35□□□□□ -2.47
TFB5YDR079C-A YLR173WQ06247 608 aa-0.35□□□□□ -2.47
TFB5YDR079C-A RRP9Q06506 573 aaKnown RBP-0.35□□□□□ -2.47
TFB5YDR079C-A MRX9Q07349 420 aaKnown RBP-0.35□□□□□ -2.47
TFB5YDR079C-A YPD1Q07688 167 aa-0.35□□□□□ -2.47
TFB5YDR079C-A ETT1Q08421 412 aaKnown RBP-0.35□□□□□ -2.47
TFB5YDR079C-A TIM18Q08749 192 aa-0.35□□□□□ -2.47
TFB5YDR079C-A YPL257WQ08974 193 aa-0.35□□□□□ -2.47
TFB5YDR079C-A RAD28Q12021 506 aa-0.35□□□□□ -2.47
TFB5YDR079C-A VAM3Q12241 283 aa-0.35□□□□□ -2.47
TFB5YDR079C-A RPN6Q12377 434 aa-0.35□□□□□ -2.47
TFB5YDR079C-A DGK1Q12382 290 aa-0.35□□□□□ -2.47
TFB5YDR079C-A NKP1Q12493 238 aa-0.35□□□□□ -2.47
TFB5YDR079C-A MHF2Q3E829 80 aa-0.35□□□□□ -2.47
TFB5YDR079C-A YAL067W-AQ8TGK6 75 aa-0.35□□□□□ -2.47
TFB5YDR079C-A Q0032Q9ZZX7 96 aa-0.35□□□□□ -2.47
TFB5YDR079C-A YEL009C-AA0A023PZF2 135 aa-0.36□□□□□ -2.47
TFB5YDR079C-A HTB1P02293 131 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A GCN4P03069 281 aa-0.36□□□□□ -2.47
TFB5YDR079C-A RHO2P06781 192 aa-0.36□□□□□ -2.47
TFB5YDR079C-A ZWF1P11412 505 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A INO4P13902 151 aa-0.36□□□□□ -2.47
TFB5YDR079C-A IDP1P21954 428 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A RPL24BP24000 155 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A POF1P25576 258 aa-0.36□□□□□ -2.47
TFB5YDR079C-A PPA2P28239 310 aa-0.36□□□□□ -2.47
TFB5YDR079C-A ERG24P32462 438 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A VAM7P32912 316 aa-0.36□□□□□ -2.47
TFB5YDR079C-A MFT1P33441 392 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A SEC66P33754 206 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YKL100CP34248 587 aa-0.36□□□□□ -2.47
TFB5YDR079C-A RRP1P35178 278 aaPredicted RBP-0.36□□□□□ -2.47
TFB5YDR079C-A PAM17P36147 197 aa-0.36□□□□□ -2.47
TFB5YDR079C-A CBP4P37267 147 aa-0.36□□□□□ -2.47
TFB5YDR079C-A FZO1P38297 855 aa-0.36□□□□□ -2.47
TFB5YDR079C-A DOG2P38773 246 aa-0.36□□□□□ -2.47
TFB5YDR079C-A DOG1P38774 246 aa-0.36□□□□□ -2.47
TFB5YDR079C-A BIG1P38813 335 aa-0.36□□□□□ -2.47
TFB5YDR079C-A UIP3P39547 235 aa-0.36□□□□□ -2.47
TFB5YDR079C-A SEC72P39742 193 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A OXA1P39952 402 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YEL075CP39972 122 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YEA4P40004 342 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YER034WP40022 185 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A RTT105P40063 208 aa-0.36□□□□□ -2.47
TFB5YDR079C-A JLP2P40206 208 aa-0.36□□□□□ -2.47
TFB5YDR079C-A RPL13BP40212 199 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A LST8P41318 303 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YRB1P41920 201 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A ERJ5P43613 295 aaPredicted RBP-0.36□□□□□ -2.47
TFB5YDR079C-A RPS0BP46654 252 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A AIM25P47140 327 aa-0.36□□□□□ -2.47
TFB5YDR079C-A PAC10P48363 199 aa-0.36□□□□□ -2.47
TFB5YDR079C-A OST3P48439 350 aa-0.36□□□□□ -2.47
TFB5YDR079C-A BRP1P53194 125 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YGR025WP53216 100 aa-0.36□□□□□ -2.47
TFB5YDR079C-A LST7P53237 242 aa-0.36□□□□□ -2.47
TFB5YDR079C-A SLX9P53251 210 aaPredicted RBP-0.36□□□□□ -2.47
TFB5YDR079C-A YGR168CP53293 376 aa-0.36□□□□□ -2.47
TFB5YDR079C-A TIM13P53299 105 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YNL260CP53846 198 aa-0.36□□□□□ -2.47
TFB5YDR079C-A RTC4P53850 401 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YNL140CP53910 189 aa-0.36□□□□□ -2.47
TFB5YDR079C-A VPS9P54787 451 aa-0.36□□□□□ -2.47
TFB5YDR079C-A HSK3P69852 69 aa-0.36□□□□□ -2.47
TFB5YDR079C-A PMP3P87284 55 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YDR366CP87287 132 aa-0.36□□□□□ -2.47
TFB5YDR079C-A DYN2Q02647 92 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YMR099CQ03161 297 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A YDR042CQ03205 200 aa-0.36□□□□□ -2.47
TFB5YDR079C-A TMA23Q03525 211 aa-0.36□□□□□ -2.47
TFB5YDR079C-A SXM1Q04175 944 aaKnown RBP-0.36□□□□□ -2.47
TFB5YDR079C-A SFH1Q06168 426 aa-0.36□□□□□ -2.47
TFB5YDR079C-A GMC2Q06201 188 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YPR153WQ06537 140 aa-0.36□□□□□ -2.47
TFB5YDR079C-A HPA2Q06592 156 aa-0.36□□□□□ -2.47
TFB5YDR079C-A RFU1Q08003 200 aa-0.36□□□□□ -2.47
TFB5YDR079C-A FEX1Q08913 375 aa-0.36□□□□□ -2.47
TFB5YDR079C-A FEX2Q08991 375 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YOR214CQ12282 236 aa-0.36□□□□□ -2.47
TFB5YDR079C-A MHT1Q12525 324 aa-0.36□□□□□ -2.47
TFB5YDR079C-A RPL13AQ12690 199 aaPredicted RBP-0.36□□□□□ -2.47
TFB5YDR079C-A YGL258W-AQ3E740 77 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YJR112W-AQ3E743 109 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YMR175W-AQ3E766 64 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YOL097W-AQ3E7Y9 61 aa-0.36□□□□□ -2.47
TFB5YDR079C-A YOS1Q3E834 85 aa-0.36□□□□□ -2.47
TFB5YDR079C-A SRN2Q99176 213 aa-0.36□□□□□ -2.47
TFB5YDR079C-A RPL25P04456 142 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A RPL27AP0C2H6 136 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A AQY2P0CD90 149 aa-0.37□□□□□ -2.47
TFB5YDR079C-A YLR157W-DP0CE99 70 aa-0.37□□□□□ -2.47
TFB5YDR079C-A RPS18AP0CX55 146 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A RPS18BP0CX56 146 aaPredicted RBP-0.37□□□□□ -2.47
TFB5YDR079C-A GCN3P14741 305 aa-0.37□□□□□ -2.47
TFB5YDR079C-A TAL1P15019 335 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A URA6P15700 204 aa-0.37□□□□□ -2.47
TFB5YDR079C-A THR4P16120 514 aaKnown RBP-0.37□□□□□ -2.47
TFB5YDR079C-A CBF1P17106 351 aa-0.37□□□□□ -2.47
TFB5YDR079C-A ERD2P18414 219 aa-0.37□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 94.5 ms