RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W ARP3P47117 449 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W COQ5P49017 307 aa1.11□□□□□ -2.23
CDC36YDL165W YIP5P53108 310 aa1.11□□□□□ -2.23
CDC36YDL165W GEP7P53171 287 aa1.11□□□□□ -2.23
CDC36YDL165W CAX4P53223 239 aa1.11□□□□□ -2.23
CDC36YDL165W BIO4P53630 237 aa1.11□□□□□ -2.23
CDC36YDL165W RNH201P53942 307 aa1.11□□□□□ -2.23
CDC36YDL165W HSK3P69852 69 aa1.11□□□□□ -2.23
CDC36YDL165W VBA1Q04301 562 aa1.11□□□□□ -2.23
CDC36YDL165W YMR090WQ04304 227 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W YMR103CQ04436 120 aa1.11□□□□□ -2.23
CDC36YDL165W ARC18Q05933 178 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W YPR098CQ06089 161 aa1.11□□□□□ -2.23
CDC36YDL165W SNT309Q06091 175 aaPredicted RBP1.11□□□□□ -2.23
CDC36YDL165W KEI1Q06346 221 aa1.11□□□□□ -2.23
CDC36YDL165W YPR174CQ06616 221 aaPredicted RBP1.11□□□□□ -2.23
CDC36YDL165W RAF1Q06891 181 aa1.11□□□□□ -2.23
CDC36YDL165W SOR2Q07786 357 aa1.11□□□□□ -2.23
CDC36YDL165W PRM3Q08931 133 aa1.11□□□□□ -2.23
CDC36YDL165W YPR203WQ08994 102 aa1.11□□□□□ -2.23
CDC36YDL165W YGK3Q12222 375 aaPredicted RBP1.11□□□□□ -2.23
CDC36YDL165W UTP23Q12339 254 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W YLR363W-AQ3E747 85 aa1.11□□□□□ -2.23
CDC36YDL165W YNL277W-AQ3E7Z0 62 aa1.11□□□□□ -2.23
CDC36YDL165W MHF2Q3E829 80 aa1.11□□□□□ -2.23
CDC36YDL165W RKR1Q04781 1562 aa1.11□□□□□ -2.23
CDC36YDL165W DNF2Q12675 1612 aa1.11□□□□□ -2.23
CDC36YDL165W TY1B-HO13535 1793 aa1.11□□□□□ -2.23
CDC36YDL165W TY1B-DR5P0C2I2 1755 aa1.11□□□□□ -2.23
CDC36YDL165W TY1B-DR6P0C2I3 1755 aa1.11□□□□□ -2.23
CDC36YDL165W TY1B-LR2P0C2I5 1755 aa1.11□□□□□ -2.23
CDC36YDL165W TY1B-LR3P0C2I6 1755 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W TY1B-PR1P0C2I9 1755 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W TY1B-PR2P0C2J0 1756 aa1.11□□□□□ -2.23
CDC36YDL165W TY1B-PR3P0C2J1 1755 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W TY1B-JR1P47098 1755 aa1.11□□□□□ -2.23
CDC36YDL165W TY1B-ML2Q03434 1755 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W TY1B-ER1Q03612 1755 aa1.11□□□□□ -2.23
CDC36YDL165W TY1B-ML1Q04711 1755 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W TY1B-GR2Q12269 1755 aa1.11□□□□□ -2.23
CDC36YDL165W TY1B-OLQ12273 1755 aa1.11□□□□□ -2.23
CDC36YDL165W TY1B-PLQ12414 1755 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W SNQ2P32568 1501 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W TY3B-GQ99315 1547 aa1.1□□□□□ -2.23
CDC36YDL165W FAS2P19097 1887 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W FMP49A0A023PZB3 126 aa1.1□□□□□ -2.23
CDC36YDL165W ADH1P00330 348 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W TRP1P00912 224 aa1.1□□□□□ -2.23
CDC36YDL165W POR1P04840 283 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W HEM4P06174 275 aa1.1□□□□□ -2.23
CDC36YDL165W YLL053CP0CD98 152 aa1.1□□□□□ -2.23
CDC36YDL165W YOL162WP0CF19 215 aa1.1□□□□□ -2.23
CDC36YDL165W RPL40AP0CH08 128 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W RPL40BP0CH09 128 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W MSI1P13712 422 aa1.1□□□□□ -2.23
CDC36YDL165W YCR099CP25657 155 aa1.1□□□□□ -2.23
CDC36YDL165W POP5P28005 173 aa1.1□□□□□ -2.23
CDC36YDL165W ALK2P32789 676 aaPredicted RBP1.1□□□□□ -2.23
CDC36YDL165W PAU16P35994 123 aa1.1□□□□□ -2.23
CDC36YDL165W MRPS9P38120 278 aa1.1□□□□□ -2.23
CDC36YDL165W SLM6P38343 150 aa1.1□□□□□ -2.23
CDC36YDL165W HMF1P40037 129 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W YPL073CP40323 161 aa1.1□□□□□ -2.23
CDC36YDL165W MRPL49P40858 161 aaPredicted RBP1.1□□□□□ -2.23
CDC36YDL165W YJL218WP40892 196 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W SAS2P40963 338 aa1.1□□□□□ -2.23
CDC36YDL165W PFS2P42841 465 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W PAU5P43575 122 aa1.1□□□□□ -2.23
CDC36YDL165W SFT1P43682 97 aa1.1□□□□□ -2.23
CDC36YDL165W GPI2P46961 280 aa1.1□□□□□ -2.23
CDC36YDL165W LCB3P47013 409 aa1.1□□□□□ -2.23
CDC36YDL165W EAF6P47128 113 aa1.1□□□□□ -2.23
CDC36YDL165W HMS2P47175 358 aa1.1□□□□□ -2.23
CDC36YDL165W YGL262WP53054 175 aa1.1□□□□□ -2.23
CDC36YDL165W VEL1P53058 206 aa1.1□□□□□ -2.23
CDC36YDL165W YGR164WP53291 111 aa1.1□□□□□ -2.23
CDC36YDL165W CAB4P53332 305 aa1.1□□□□□ -2.23
CDC36YDL165W YNR064CP53750 290 aa1.1□□□□□ -2.23
CDC36YDL165W SPR6Q01684 191 aa1.1□□□□□ -2.23
CDC36YDL165W YDR209CQ03480 137 aa1.1□□□□□ -2.23
CDC36YDL165W INP1Q03694 420 aa1.1□□□□□ -2.23
CDC36YDL165W RRS1Q08746 203 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W YDL157CQ12082 118 aa1.1□□□□□ -2.23
CDC36YDL165W YDR029WQ12111 104 aa1.1□□□□□ -2.23
CDC36YDL165W SME1Q12330 94 aaPredicted RBP1.1□□□□□ -2.23
CDC36YDL165W IZH2Q12442 317 aa1.1□□□□□ -2.23
CDC36YDL165W YPL119C-AQ3E751 87 aa1.1□□□□□ -2.23
CDC36YDL165W NTE1Q04958 1679 aa1.1□□□□□ -2.23
CDC36YDL165W VTH1P40438 1549 aa1.1□□□□□ -2.23
CDC36YDL165W VTH2P40890 1549 aa1.1□□□□□ -2.23
CDC36YDL165W PDR15Q04182 1529 aaKnown RBP1.1□□□□□ -2.23
CDC36YDL165W RPO21P04050 1733 aaKnown RBP1.09□□□□□ -2.23
CDC36YDL165W CDC25P04821 1589 aa1.09□□□□□ -2.23
CDC36YDL165W UTP10P42945 1769 aaKnown RBP1.09□□□□□ -2.23
CDC36YDL165W ULS1Q08562 1619 aa1.09□□□□□ -2.23
CDC36YDL165W TIM9O74700 87 aa1.09□□□□□ -2.23
CDC36YDL165W COX5AP00424 153 aa1.09□□□□□ -2.23
CDC36YDL165W OPI3P05375 206 aa1.09□□□□□ -2.23
CDC36YDL165W RPL2AP0CX45 254 aaKnown RBP1.09□□□□□ -2.23
CDC36YDL165W RPL2BP0CX46 254 aaKnown RBP1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms