RNA–Protein interactions for RNA: YCL010C

SGF29, Transcript of Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes, yeast

Gene SGF29, Length 780 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGF29	YCL010C	GNP1	P48813	663 aa		4.94	□□□□□ -1.62
SGF29	YCL010C	YAP1802	P53309	568 aa		4.94	□□□□□ -1.62
SGF29	YCL010C	NCE103	P53615	221 aa		4.94	□□□□□ -1.62
SGF29	YCL010C	AVO2	Q04749	426 aa		4.94	□□□□□ -1.62
SGF29	YCL010C	PRM3	Q08931	133 aa		4.94	□□□□□ -1.62
SGF29	YCL010C	TAR1	Q8TGM6	124 aa		4.94	□□□□□ -1.62
SGF29	YCL010C	TDH1	P00360	332 aa	Known RBP	4.93	□□□□□ -1.62
SGF29	YCL010C	CYC3	P06182	269 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	MIC12	P38341	106 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	EMC5	P40540	141 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	YPI1	P43587	155 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	PHO23	P50947	330 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	ERG25	P53045	309 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	YNR066C	P53752	436 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	BOR1	P53838	576 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	OCA2	P53949	197 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	VPS71	Q03433	280 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	TIM18	Q08749	192 aa		4.93	□□□□□ -1.62
SGF29	YCL010C	RPP1A	P05318	106 aa	Predicted RBP	4.92	□□□□□ -1.62
SGF29	YCL010C	YHR213W	P0CI67	198 aa		4.92	□□□□□ -1.62
SGF29	YCL010C	RPS0A	P32905	252 aa	Known RBP	4.92	□□□□□ -1.62
SGF29	YCL010C	YBR144C	P34215	104 aa		4.92	□□□□□ -1.62
SGF29	YCL010C	PET100	P38958	111 aa		4.92	□□□□□ -1.62
SGF29	YCL010C	VMA7	P39111	118 aa		4.92	□□□□□ -1.62
SGF29	YCL010C	SIM1	P40472	476 aa		4.92	□□□□□ -1.62
SGF29	YCL010C	RTS2	P40962	232 aa		4.92	□□□□□ -1.62
SGF29	YCL010C	SRB7	P47822	140 aa		4.92	□□□□□ -1.62
SGF29	YCL010C	DSK2	P48510	373 aa		4.92	□□□□□ -1.62
SGF29	YCL010C	YLR179C	Q06252	201 aa	Known RBP	4.92	□□□□□ -1.62
SGF29	YCL010C	SDO1	Q07953	250 aa	Known RBP	4.92	□□□□□ -1.62
SGF29	YCL010C	AYT1	Q12226	474 aa		4.92	□□□□□ -1.62
SGF29	YCL010C	YLR122C	Q12312	125 aa		4.92	□□□□□ -1.62
SGF29	YCL010C	POP5	P28005	173 aa		4.91	□□□□□ -1.62
SGF29	YCL010C	SIP1	P32578	815 aa		4.91	□□□□□ -1.62
SGF29	YCL010C	RPL14A	P36105	138 aa	Known RBP	4.91	□□□□□ -1.62
SGF29	YCL010C	CSH1	P38287	376 aa		4.91	□□□□□ -1.62
SGF29	YCL010C	RPL14B	P38754	138 aa	Known RBP	4.91	□□□□□ -1.62
SGF29	YCL010C	GLE2	P40066	365 aa		4.91	□□□□□ -1.62
SGF29	YCL010C	HST4	P53688	370 aa		4.91	□□□□□ -1.62
SGF29	YCL010C	SDH7	Q04401	133 aa		4.91	□□□□□ -1.62
SGF29	YCL010C	MSC3	Q05812	728 aa		4.91	□□□□□ -1.62
SGF29	YCL010C	SME1	Q12330	94 aa	Predicted RBP	4.91	□□□□□ -1.62
SGF29	YCL010C	YOR011W-A	Q3E807	68 aa		4.91	□□□□□ -1.62
SGF29	YCL010C	YBR085C-A	O43137	85 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	QCR9	P22289	66 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	SFT2	P38166	215 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	TRS20	P38334	175 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	POR2	P40478	281 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	YIL077C	P40508	320 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	LCB3	P47013	409 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	GRH1	Q04410	372 aa	Known RBP	4.9	□□□□□ -1.63
SGF29	YCL010C	TRI1	Q05024	226 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	RRG8	Q06109	277 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	ATG39	Q06159	398 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	ATP14	Q12349	124 aa		4.9	□□□□□ -1.63
SGF29	YCL010C	MDM10	P18409	493 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	ZRC1	P20107	442 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	ALK2	P32789	676 aa	Predicted RBP	4.89	□□□□□ -1.63
SGF29	YCL010C	TIR2	P33890	251 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	CMC1	P36064	111 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	ECM33	P38248	429 aa	Known RBP	4.89	□□□□□ -1.63
SGF29	YCL010C	YBR292C	P38357	123 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	YNL194C	P40169	301 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	SNN1	P48232	102 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	ORM1	P53224	222 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	YNR071C	P53757	342 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	CAF40	P53829	373 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	PRM7	Q12459	698 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	COX19	Q3E731	98 aa		4.89	□□□□□ -1.63
SGF29	YCL010C	YDR157W	A0A023PZE8	133 aa		4.88	□□□□□ -1.63
SGF29	YCL010C	MRP10	O75012	95 aa		4.88	□□□□□ -1.63
SGF29	YCL010C	RIB5	P38145	238 aa		4.88	□□□□□ -1.63
SGF29	YCL010C	IMP2	P46972	177 aa		4.88	□□□□□ -1.63
SGF29	YCL010C	MCM22	P47167	239 aa		4.88	□□□□□ -1.63
SGF29	YCL010C	TOM7	P53507	60 aa		4.88	□□□□□ -1.63
SGF29	YCL010C	FMP41	P53889	259 aa	Known RBP	4.88	□□□□□ -1.63
SGF29	YCL010C	YCL001W-A	P87012	153 aa		4.88	□□□□□ -1.63
SGF29	YCL010C	LDS2	Q08218	356 aa		4.88	□□□□□ -1.63
SGF29	YCL010C	PHD1	P36093	366 aa		4.87	□□□□□ -1.63
SGF29	YCL010C	SNF11	P38956	169 aa		4.87	□□□□□ -1.63
SGF29	YCL010C	YIL163C	P40448	117 aa		4.87	□□□□□ -1.63
SGF29	YCL010C	SNX4	P47057	423 aa		4.87	□□□□□ -1.63
SGF29	YCL010C	UBC7	Q02159	165 aa		4.87	□□□□□ -1.63
SGF29	YCL010C	TMA23	Q03525	211 aa		4.87	□□□□□ -1.63
SGF29	YCL010C	ATC1	Q04005	294 aa		4.87	□□□□□ -1.63
SGF29	YCL010C	FIT2	Q08906	153 aa		4.87	□□□□□ -1.63
SGF29	YCL010C	YLR302C	O13544	120 aa		4.86	□□□□□ -1.63
SGF29	YCL010C	HSP12	P22943	109 aa	Known RBP	4.86	□□□□□ -1.63
SGF29	YCL010C	MSK1	P32048	576 aa		4.86	□□□□□ -1.63
SGF29	YCL010C	FPR2	P32472	135 aa		4.86	□□□□□ -1.63
SGF29	YCL010C	UTR5	P32630	166 aa		4.86	□□□□□ -1.63
SGF29	YCL010C	YKL069W	P36088	180 aa		4.86	□□□□□ -1.63
SGF29	YCL010C	SIT1	P39980	628 aa		4.86	□□□□□ -1.63
SGF29	YCL010C	GET2	P40056	285 aa		4.86	□□□□□ -1.63
SGF29	YCL010C	SAS2	P40963	338 aa		4.86	□□□□□ -1.63
SGF29	YCL010C	LOC1	P43586	204 aa	Predicted RBP	4.86	□□□□□ -1.63
SGF29	YCL010C	RIB4	P50861	169 aa	Predicted RBP	4.86	□□□□□ -1.63
SGF29	YCL010C	RAV2	Q03956	351 aa		4.86	□□□□□ -1.63
SGF29	YCL010C	LOA1	Q06508	300 aa		4.86	□□□□□ -1.63
SGF29	YCL010C	YOL160W	Q08321	113 aa		4.86	□□□□□ -1.63

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