RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C ERG27Q12452 347 aaKnown RBP5.72□□□□□ -1.49
TDP1YBR223C HSP12P22943 109 aaKnown RBP5.71□□□□□ -1.5
TDP1YBR223C SRP21P32342 167 aa5.71□□□□□ -1.5
TDP1YBR223C FPR2P32472 135 aa5.71□□□□□ -1.5
TDP1YBR223C SOR1P35497 357 aaKnown RBP5.71□□□□□ -1.5
TDP1YBR223C YAR068WP39564 161 aa5.71□□□□□ -1.5
TDP1YBR223C SOR2Q07786 357 aa5.71□□□□□ -1.5
TDP1YBR223C FYV7Q12247 151 aa5.71□□□□□ -1.5
TDP1YBR223C HTB1P02293 131 aaKnown RBP5.7□□□□□ -1.5
TDP1YBR223C ILV5P06168 395 aaKnown RBP5.7□□□□□ -1.5
TDP1YBR223C TCA17P32613 152 aa5.7□□□□□ -1.5
TDP1YBR223C NNK1P36003 928 aa5.7□□□□□ -1.5
TDP1YBR223C YTH1Q06102 208 aaPredicted RBP5.7□□□□□ -1.5
TDP1YBR223C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
TDP1YBR223C YOR029WQ12243 111 aa5.7□□□□□ -1.5
TDP1YBR223C YMR105W-AQ8TGS8 64 aa5.7□□□□□ -1.5
TDP1YBR223C SEN1Q00416 2231 aaKnown RBP5.7□□□□□ -1.5
TDP1YBR223C YLR302CO13544 120 aa5.7□□□□□ -1.5
TDP1YBR223C YFL015CP43578 164 aa5.7□□□□□ -1.5
TDP1YBR223C CPD1P53314 239 aa5.7□□□□□ -1.5
TDP1YBR223C ATX2Q12067 313 aa5.7□□□□□ -1.5
TDP1YBR223C COX17Q12287 69 aa5.7□□□□□ -1.5
TDP1YBR223C YCL001W-BQ96VH2 84 aa5.7□□□□□ -1.5
TDP1YBR223C IRA1P18963 3092 aa5.69□□□□□ -1.5
TDP1YBR223C SOD1P00445 154 aaKnown RBP5.69□□□□□ -1.5
TDP1YBR223C PAM17P36147 197 aa5.69□□□□□ -1.5
TDP1YBR223C YBL071CP38185 102 aa5.69□□□□□ -1.5
TDP1YBR223C YGP1P38616 354 aaKnown RBP5.69□□□□□ -1.5
TDP1YBR223C YHR173CP38864 112 aa5.69□□□□□ -1.5
TDP1YBR223C SED1Q01589 338 aa5.69□□□□□ -1.5
TDP1YBR223C API2Q04413 109 aa5.69□□□□□ -1.5
TDP1YBR223C NDE2Q07500 545 aa5.69□□□□□ -1.5
TDP1YBR223C YDL218WQ07629 317 aa5.69□□□□□ -1.5
TDP1YBR223C CUP2P15315 225 aa5.68□□□□□ -1.5
TDP1YBR223C QRI5P32344 111 aa5.68□□□□□ -1.5
TDP1YBR223C YHL037CP38733 133 aa5.68□□□□□ -1.5
TDP1YBR223C YER121WP40076 114 aa5.68□□□□□ -1.5
TDP1YBR223C POM33Q12164 279 aa5.68□□□□□ -1.5
TDP1YBR223C HMRA1P0CY11 126 aa5.67□□□□□ -1.5
TDP1YBR223C RPI1P23250 407 aaKnown RBP5.67□□□□□ -1.5
TDP1YBR223C YBR090CP38253 122 aa5.67□□□□□ -1.5
TDP1YBR223C CSH1P38287 376 aa5.67□□□□□ -1.5
TDP1YBR223C CTR2P38865 189 aa5.67□□□□□ -1.5
TDP1YBR223C BDH1P39714 382 aa5.67□□□□□ -1.5
TDP1YBR223C AIM24P47127 394 aa5.67□□□□□ -1.5
TDP1YBR223C YGL260WP53056 76 aa5.67□□□□□ -1.5
TDP1YBR223C YNR071CP53757 342 aa5.67□□□□□ -1.5
TDP1YBR223C TMA10Q06177 86 aa5.67□□□□□ -1.5
TDP1YBR223C FIT2Q08906 153 aa5.67□□□□□ -1.5
TDP1YBR223C RPS22BQ3E7Y3 130 aaKnown RBP5.67□□□□□ -1.5
TDP1YBR223C ATP5P09457 212 aa5.66□□□□□ -1.5
TDP1YBR223C PMU1P36069 295 aa5.66□□□□□ -1.5
TDP1YBR223C ICS2P38284 255 aa5.66□□□□□ -1.5
TDP1YBR223C YNL046WP53956 172 aa5.66□□□□□ -1.5
TDP1YBR223C ATP19P81451 68 aa5.66□□□□□ -1.5
TDP1YBR223C IZH1Q03419 316 aa5.66□□□□□ -1.5
TDP1YBR223C RAV2Q03956 351 aa5.66□□□□□ -1.5
TDP1YBR223C YDL009CQ12210 107 aa5.66□□□□□ -1.5
TDP1YBR223C MIX23P38162 196 aa5.66□□□□□ -1.5
TDP1YBR223C DOG2P38773 246 aa5.66□□□□□ -1.5
TDP1YBR223C DOG1P38774 246 aa5.66□□□□□ -1.5
TDP1YBR223C ECM14P38836 430 aa5.66□□□□□ -1.5
TDP1YBR223C SGN1P40561 250 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
TDP1YBR223C CDC40P40968 455 aaPredicted RBP5.66□□□□□ -1.5
TDP1YBR223C LST8P41318 303 aa5.66□□□□□ -1.5
TDP1YBR223C RPA43P46669 326 aa5.66□□□□□ -1.5
TDP1YBR223C DUG3P53871 357 aa5.66□□□□□ -1.5
TDP1YBR223C SAE3P89114 91 aa5.66□□□□□ -1.5
TDP1YBR223C MHR1Q06630 226 aa5.66□□□□□ -1.5
TDP1YBR223C YDL085C-AQ3E7B7 68 aaKnown RBP5.66□□□□□ -1.5
TDP1YBR223C YCR024C-BQ3E7Z8 88 aa5.66□□□□□ -1.5
TDP1YBR223C YCR022CP25620 114 aa5.65□□□□□ -1.51
TDP1YBR223C DAL80P26343 269 aa5.65□□□□□ -1.51
TDP1YBR223C SFT2P38166 215 aa5.65□□□□□ -1.51
TDP1YBR223C AME1P38313 324 aa5.65□□□□□ -1.51
TDP1YBR223C YER134CP40081 178 aa5.65□□□□□ -1.51
TDP1YBR223C GAT2P40209 560 aa5.65□□□□□ -1.51
TDP1YBR223C YDL183CP48569 320 aa5.65□□□□□ -1.51
TDP1YBR223C TOM7P53507 60 aa5.65□□□□□ -1.51
TDP1YBR223C MRX11Q03079 207 aa5.65□□□□□ -1.51
TDP1YBR223C SDH7Q04401 133 aa5.65□□□□□ -1.51
TDP1YBR223C YPL278CQ08990 100 aa5.65□□□□□ -1.51
TDP1YBR223C SPC29P33419 253 aa5.64□□□□□ -1.51
TDP1YBR223C YKL187CP34231 750 aa5.64□□□□□ -1.51
TDP1YBR223C ALG14P38242 237 aa5.64□□□□□ -1.51
TDP1YBR223C HUA1P40325 198 aa5.64□□□□□ -1.51
TDP1YBR223C TDA4P47153 279 aa5.64□□□□□ -1.51
TDP1YBR223C YGR018CP53211 109 aa5.64□□□□□ -1.51
TDP1YBR223C YNR064CP53750 290 aa5.64□□□□□ -1.51
TDP1YBR223C STD1Q02794 444 aa5.64□□□□□ -1.51
TDP1YBR223C YMR166CQ03829 368 aa5.64□□□□□ -1.51
TDP1YBR223C PKR1Q03880 122 aaKnown RBP5.64□□□□□ -1.51
TDP1YBR223C GIM5Q04493 163 aa5.64□□□□□ -1.51
TDP1YBR223C IRC25Q07951 179 aa5.64□□□□□ -1.51
TDP1YBR223C YER190C-BP0CX94 160 aa5.63□□□□□ -1.51
TDP1YBR223C YEL077W-AP0CX95 160 aa5.63□□□□□ -1.51
TDP1YBR223C YGR296C-BP0CX96 160 aa5.63□□□□□ -1.51
TDP1YBR223C YPL283W-BP0CX97 160 aa5.63□□□□□ -1.51
TDP1YBR223C YPR204C-AP0CX98 160 aa5.63□□□□□ -1.51
TDP1YBR223C TIR1P10863 254 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms