RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	GSP1	P32835	219 aa	Known RBP	2.95	□□□□□ -1.94
YAL004W	YAL004W	GSP2	P32836	220 aa	Known RBP	2.95	□□□□□ -1.94
YAL004W	YAL004W	SNC2	P33328	115 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	YHR180W	P38868	163 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	VMA7	P39111	118 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	YEA4	P40004	342 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	EDC2	P40023	145 aa	Predicted RBP	2.95	□□□□□ -1.94
YAL004W	YAL004W	GLC8	P41818	229 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	GPI14	P47088	403 aa	Known RBP	2.95	□□□□□ -1.94
YAL004W	YAL004W	FMP48	P53233	369 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	MRX8	Q05473	314 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	NMA1	Q06178	401 aa	Known RBP	2.95	□□□□□ -1.94
YAL004W	YAL004W	ATP14	Q12349	124 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	YIR021W-A	Q3E739	70 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	YIL046W-A	Q3E7Z4	54 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	YPR014C	Q6B0W2	109 aa		2.95	□□□□□ -1.94
YAL004W	YAL004W	YOR304C-A	O14468	76 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	MSW1	P04803	379 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	MRS3	P10566	314 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	BGL2	P15703	313 aa	Known RBP	2.94	□□□□□ -1.94
YAL004W	YAL004W	MRP17	P28778	131 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	HSP150	P32478	413 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	EMP24	P32803	203 aa	Known RBP	2.94	□□□□□ -1.94
YAL004W	YAL004W	MRPL24	P36525	258 aa	Predicted RBP	2.94	□□□□□ -1.94
YAL004W	YAL004W	SMP1	P38128	452 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	DLS1	P40366	167 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	PRM5	P40476	318 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	ERJ5	P43613	295 aa	Predicted RBP	2.94	□□□□□ -1.94
YAL004W	YAL004W	YJR085C	P47131	105 aa	Known RBP	2.94	□□□□□ -1.94
YAL004W	YAL004W	YPL039W	Q03080	316 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	RUB1	Q03919	77 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	SYM1	Q06563	197 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	HRD1	Q08109	551 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	AYT1	Q12226	474 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	MPD1	Q12404	318 aa	Known RBP	2.94	□□□□□ -1.94
YAL004W	YAL004W	YBR298C-A	Q8TGK4	73 aa		2.94	□□□□□ -1.94
YAL004W	YAL004W	RPL15A	P05748	204 aa	Known RBP	2.93	□□□□□ -1.94
YAL004W	YAL004W	CDC7	P06243	507 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	CNB1	P25296	175 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	FMT1	P32785	401 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	UMP1	P38293	148 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	YGP1	P38616	354 aa	Known RBP	2.93	□□□□□ -1.94
YAL004W	YAL004W	RPL13B	P40212	199 aa	Known RBP	2.93	□□□□□ -1.94
YAL004W	YAL004W	CUP9	P41817	306 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	SOL1	P50278	321 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	YGR050C	P53231	118 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	RNH201	P53942	307 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	RPL15B	P54780	204 aa	Predicted RBP	2.93	□□□□□ -1.94
YAL004W	YAL004W	CGI121	Q03705	181 aa	Known RBP	2.93	□□□□□ -1.94
YAL004W	YAL004W	YMR320W	Q04897	101 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	ERP1	Q05359	219 aa	Known RBP	2.93	□□□□□ -1.94
YAL004W	YAL004W	ANT1	Q06497	328 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	FEX1	Q08913	375 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	GEP5	Q12393	293 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	RPL13A	Q12690	199 aa	Predicted RBP	2.93	□□□□□ -1.94
YAL004W	YAL004W	TSC3	Q3E790	80 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	YHR213W-A	Q8TGT4	77 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	ODC2	Q99297	307 aa		2.93	□□□□□ -1.94
YAL004W	YAL004W	YHR139C-A	O13536	103 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	REP2	P03872	296 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	YHR214C-D	P0CX93	97 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	SPO13	P23624	291 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	YCR101C	P25607	182 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	ERG2	P32352	222 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	RFC2	P40348	353 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	RPR2	P40571	144 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	GLR1	P41921	483 aa	Known RBP	2.92	□□□□□ -1.94
YAL004W	YAL004W	PGU1	P47180	361 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	UFD1	P53044	361 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	RSM27	P53305	110 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	HHO1	P53551	258 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	BOR1	P53838	576 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	BUD25	P85052	153 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	APS2	Q00381	147 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	COF1	Q03048	143 aa	Known RBP	2.92	□□□□□ -1.94
YAL004W	YAL004W	FEX2	Q08991	375 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	FYV7	Q12247	151 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	YPR117W	Q06116	2489 aa		2.92	□□□□□ -1.94
YAL004W	YAL004W	RPL30	P14120	105 aa	Known RBP	2.91	□□□□□ -1.94
YAL004W	YAL004W	MRP49	P32388	137 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	COS8	P38723	381 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	ASP1	P38986	381 aa	Predicted RBP	2.91	□□□□□ -1.94
YAL004W	YAL004W	GCV3	P39726	170 aa	Predicted RBP	2.91	□□□□□ -1.94
YAL004W	YAL004W	YPL073C	P40323	161 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	PGD1	P40356	397 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	OST2	P46964	130 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	ARP3	P47117	449 aa	Known RBP	2.91	□□□□□ -1.94
YAL004W	YAL004W	YGL262W	P53054	175 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	WSC2	P53832	503 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	TSA2	Q04120	196 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	YLR179C	Q06252	201 aa	Known RBP	2.91	□□□□□ -1.94
YAL004W	YAL004W	CNL1	Q06333	122 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	SCP1	Q08873	200 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	YOR376W	Q08900	122 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	PRR2	Q12310	699 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	JID1	Q12350	301 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	RPL21B	Q12672	160 aa	Known RBP	2.91	□□□□□ -1.94
YAL004W	YAL004W	YGL194C-A	Q2V2P6	80 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	HTL1	Q9URQ5	78 aa		2.91	□□□□□ -1.94
YAL004W	YAL004W	UBR1	P19812	1950 aa		2.91	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms