RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 ACP1P32463 125 aa8.38□□□□□ -1.07
RDN18-1RDN18-1 YKR045CP36138 183 aa8.38□□□□□ -1.07
RDN18-1RDN18-1 ADH5P38113 351 aaKnown RBP8.38□□□□□ -1.07
RDN18-1RDN18-1 YER121WP40076 114 aa8.38□□□□□ -1.07
RDN18-1RDN18-1 DCN1Q12395 269 aa8.38□□□□□ -1.07
RDN18-1RDN18-1 RAD23P32628 398 aaKnown RBP8.38□□□□□ -1.07
RDN18-1RDN18-1 DAD2P36162 133 aa8.38□□□□□ -1.07
RDN18-1RDN18-1 CYB5P40312 120 aa8.38□□□□□ -1.07
RDN18-1RDN18-1 SSU72P53538 206 aaPredicted RBP8.38□□□□□ -1.07
RDN18-1RDN18-1 YCL048W-AQ2V2Q2 79 aa8.38□□□□□ -1.07
RDN18-1RDN18-1 SRP21P32342 167 aa8.37□□□□□ -1.07
RDN18-1RDN18-1 PMU1P36069 295 aa8.37□□□□□ -1.07
RDN18-1RDN18-1 SGN1P40561 250 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
RDN18-1RDN18-1 YOR352WQ08816 343 aa8.37□□□□□ -1.07
RDN18-1RDN18-1 YDL009CQ12210 107 aa8.37□□□□□ -1.07
RDN18-1RDN18-1 PAA1Q12447 191 aaKnown RBP8.37□□□□□ -1.07
RDN18-1RDN18-1 TMA17Q12513 150 aa8.37□□□□□ -1.07
RDN18-1RDN18-1 LSO2Q3E772 92 aaKnown RBP8.37□□□□□ -1.07
RDN18-1RDN18-1 SAS2P40963 338 aa8.36□□□□□ -1.07
RDN18-1RDN18-1 CPD1P53314 239 aa8.36□□□□□ -1.07
RDN18-1RDN18-1 POR1P04840 283 aaKnown RBP8.36□□□□□ -1.07
RDN18-1RDN18-1 DFR1P07807 211 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
RDN18-1RDN18-1 SPS100P13130 326 aa8.36□□□□□ -1.07
RDN18-1RDN18-1 PRE9P23638 258 aaKnown RBP8.36□□□□□ -1.07
RDN18-1RDN18-1 YCR022CP25620 114 aa8.36□□□□□ -1.07
RDN18-1RDN18-1 FPR2P32472 135 aa8.36□□□□□ -1.07
RDN18-1RDN18-1 TIF11P38912 153 aaKnown RBP8.36□□□□□ -1.07
RDN18-1RDN18-1 HUA1P40325 198 aa8.36□□□□□ -1.07
RDN18-1RDN18-1 LST8P41318 303 aa8.36□□□□□ -1.07
RDN18-1RDN18-1 YGR018CP53211 109 aa8.36□□□□□ -1.07
RDN18-1RDN18-1 YNL234WP53857 426 aa8.36□□□□□ -1.07
RDN18-1RDN18-1 SMT3Q12306 101 aaKnown RBP8.36□□□□□ -1.07
RDN18-1RDN18-1 ATO3Q12359 275 aa8.36□□□□□ -1.07
RDN18-1RDN18-1 YKL187CP34231 750 aa8.35□□□□□ -1.07
RDN18-1RDN18-1 CSH1P38287 376 aa8.35□□□□□ -1.07
RDN18-1RDN18-1 BDH1P39714 382 aa8.35□□□□□ -1.07
RDN18-1RDN18-1 LSM4P40070 187 aaKnown RBP8.35□□□□□ -1.07
RDN18-1RDN18-1 MIX17Q03667 156 aa8.35□□□□□ -1.07
RDN18-1RDN18-1 NDE2Q07500 545 aa8.35□□□□□ -1.07
RDN18-1RDN18-1 YNR034W-AQ3E841 98 aa8.35□□□□□ -1.07
RDN18-1RDN18-1 YIL134C-AQ45U18 67 aa8.35□□□□□ -1.07
RDN18-1RDN18-1 PRP8P33334 2413 aaKnown RBP8.35□□□□□ -1.07
RDN18-1RDN18-1 NNK1P36003 928 aa8.34□□□□□ -1.07
RDN18-1RDN18-1 IRC22P40006 225 aa8.34□□□□□ -1.07
RDN18-1RDN18-1 YJL213WP40896 331 aa8.34□□□□□ -1.07
RDN18-1RDN18-1 OST3P48439 350 aa8.34□□□□□ -1.07
RDN18-1RDN18-1 YNR064CP53750 290 aa8.34□□□□□ -1.07
RDN18-1RDN18-1 OCA2P53949 197 aa8.34□□□□□ -1.07
RDN18-1RDN18-1 YLR302CO13544 120 aa8.33□□□□□ -1.08
RDN18-1RDN18-1 ERV14P53173 138 aa8.33□□□□□ -1.08
RDN18-1RDN18-1 YOR105WQ08504 108 aa8.33□□□□□ -1.08
RDN18-1RDN18-1 SUA7P29055 345 aaPredicted RBP8.33□□□□□ -1.08
RDN18-1RDN18-1 PAM17P36147 197 aa8.33□□□□□ -1.08
RDN18-1RDN18-1 YBL071CP38185 102 aa8.33□□□□□ -1.08
RDN18-1RDN18-1 LSM2P38203 95 aaKnown RBP8.33□□□□□ -1.08
RDN18-1RDN18-1 RAV2Q03956 351 aa8.33□□□□□ -1.08
RDN18-1RDN18-1 MCH1Q07376 486 aa8.33□□□□□ -1.08
RDN18-1RDN18-1 FIT2Q08906 153 aa8.33□□□□□ -1.08
RDN18-1RDN18-1 DOG2P38773 246 aa8.32□□□□□ -1.08
RDN18-1RDN18-1 DOG1P38774 246 aa8.32□□□□□ -1.08
RDN18-1RDN18-1 YMR166CQ03829 368 aa8.32□□□□□ -1.08
RDN18-1RDN18-1 SCM4P32564 187 aa8.31□□□□□ -1.08
RDN18-1RDN18-1 MTR2P34232 184 aaKnown RBP8.31□□□□□ -1.08
RDN18-1RDN18-1 STD1Q02794 444 aa8.31□□□□□ -1.08
RDN18-1RDN18-1 ARR2Q06597 130 aa8.31□□□□□ -1.08
RDN18-1RDN18-1 CUP2P15315 225 aa8.31□□□□□ -1.08
RDN18-1RDN18-1 HSP12P22943 109 aaKnown RBP8.31□□□□□ -1.08
RDN18-1RDN18-1 YHR173CP38864 112 aa8.31□□□□□ -1.08
RDN18-1RDN18-1 YGR151CP53287 111 aa8.31□□□□□ -1.08
RDN18-1RDN18-1 TOM7P53507 60 aa8.31□□□□□ -1.08
RDN18-1RDN18-1 FCY1Q12178 158 aa8.31□□□□□ -1.08
RDN18-1RDN18-1 YCL001W-BQ96VH2 84 aa8.31□□□□□ -1.08
RDN18-1RDN18-1 ERG27Q12452 347 aaKnown RBP8.3□□□□□ -1.08
RDN18-1RDN18-1 BPH1P25356 2167 aa8.3□□□□□ -1.08
RDN18-1RDN18-1 ADE8P04161 214 aa8.29□□□□□ -1.08
RDN18-1RDN18-1 IES6P32617 166 aa8.29□□□□□ -1.08
RDN18-1RDN18-1 SFT2P38166 215 aa8.29□□□□□ -1.08
RDN18-1RDN18-1 GPI18P38211 433 aa8.29□□□□□ -1.08
RDN18-1RDN18-1 QRI5P32344 111 aa8.29□□□□□ -1.08
RDN18-1RDN18-1 YKL075CP36083 450 aa8.29□□□□□ -1.08
RDN18-1RDN18-1 GAT2P40209 560 aa8.29□□□□□ -1.08
RDN18-1RDN18-1 YGR045CP53229 120 aa8.29□□□□□ -1.08
RDN18-1RDN18-1 IRC25Q07951 179 aa8.29□□□□□ -1.08
RDN18-1RDN18-1 YCR024C-BQ3E7Z8 88 aa8.29□□□□□ -1.08
RDN18-1RDN18-1 MRPL11P36521 249 aaPredicted RBP8.28□□□□□ -1.08
RDN18-1RDN18-1 ICS2P38284 255 aa8.28□□□□□ -1.08
RDN18-1RDN18-1 YNR071CP53757 342 aa8.28□□□□□ -1.08
RDN18-1RDN18-1 RXT3Q07458 294 aa8.28□□□□□ -1.08
RDN18-1RDN18-1 COA6Q3E846 104 aa8.28□□□□□ -1.08
RDN18-1RDN18-1 MIX23P38162 196 aa8.27□□□□□ -1.09
RDN18-1RDN18-1 AYT1Q12226 474 aa8.27□□□□□ -1.09
RDN18-1RDN18-1 JID1Q12350 301 aa8.27□□□□□ -1.09
RDN18-1RDN18-1 HST4P53688 370 aa8.26□□□□□ -1.09
RDN18-1RDN18-1 ATP19P81451 68 aa8.26□□□□□ -1.09
RDN18-1RDN18-1 IZH1Q03419 316 aa8.26□□□□□ -1.09
RDN18-1RDN18-1 FZF1P32805 299 aa8.26□□□□□ -1.09
RDN18-1RDN18-1 TMA10Q06177 86 aa8.26□□□□□ -1.09
RDN18-1RDN18-1 IRC23Q08416 157 aa8.26□□□□□ -1.09
RDN18-1RDN18-1 TMC1Q08422 150 aaPredicted RBP8.26□□□□□ -1.09
RDN18-1RDN18-1 ILV5P06168 395 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms