RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.63■□□□□ 0.41
COLCA2-207ENST00000639470 SNX9Q9Y5X1 595 aa17.63■□□□□ 0.41
COLCA2-207ENST00000639470 A0A1B0GVL5 298 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 KLRC4O43908 158 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 LDHAP00338 332 aaKnown RBP17.62■□□□□ 0.41
COLCA2-207ENST00000639470 TMEM191BP0C7N4 346 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 HAPLN1P10915 354 aaPredicted RBP17.62■□□□□ 0.41
COLCA2-207ENST00000639470 NBL1P41271 181 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 SOX9P48436 509 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 CASP4P49662 377 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 POU5F1Q01860 360 aaKnown RBP17.62■□□□□ 0.41
COLCA2-207ENST00000639470 SOWAHAQ2M3V2 549 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 GPR158Q5T848 1215 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 CNNM4Q6P4Q7 775 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 PLEKHO2Q8TD55 490 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 LEO1Q8WVC0 666 aaPredicted RBP17.62■□□□□ 0.41
COLCA2-207ENST00000639470 ZNF560Q96MR9 790 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 PKMYT1Q99640 499 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 OXCT2Q9BYC2 517 aaPredicted RBP17.62■□□□□ 0.41
COLCA2-207ENST00000639470 ATXN3LQ9H3M9 355 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 BRD9Q9H8M2 597 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 DDX43Q9NXZ2 648 aaKnown RBP17.62■□□□□ 0.41
COLCA2-207ENST00000639470 DSEQ9UL01 958 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 MAFFQ9ULX9 164 aa17.62■□□□□ 0.41
COLCA2-207ENST00000639470 NDRG2Q9UN36 371 aaKnown RBP17.62■□□□□ 0.41
COLCA2-207ENST00000639470 PRR23AA6NEV1 266 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 MICAL2O94851 1124 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 PRR29P0C7W0 189 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 DLATP10515 647 aaKnown RBP17.61■□□□□ 0.41
COLCA2-207ENST00000639470 PFKFB1P16118 471 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 CYP2F1P24903 491 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 PSMC1P62191 440 aaKnown RBP17.61■□□□□ 0.41
COLCA2-207ENST00000639470 FZD5Q13467 585 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 DDR2Q16832 855 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 TMEM150AQ86TG1 271 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 NT5DC4Q86YG4 428 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 ARID3BQ8IVW6 561 aaPredicted RBP17.61■□□□□ 0.41
COLCA2-207ENST00000639470 ADGRF2Q8IZF7 708 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 THEM5Q8N1Q8 247 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 RIN3Q8TB24 985 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 KBTBD7Q8WVZ9 684 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 ZNF516Q92618 1163 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 CCDC127Q96BQ5 260 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 PAGE5Q96GU1 130 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 TRMT61BQ9BVS5 477 aaKnown RBP17.61■□□□□ 0.41
COLCA2-207ENST00000639470 FAM13BQ9NYF5 915 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 GTF3C4Q9UKN8 822 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 ITGA11Q9UKX5 1188 aa17.61■□□□□ 0.41
COLCA2-207ENST00000639470 ZFHX2Q9C0A1 2572 aaPredicted RBP17.61■□□□□ 0.41
COLCA2-207ENST00000639470 MYBPHLA2RUH7 354 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 ZNF233A6NK53 670 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 ARNTLO00327 626 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 EIF3DO15371 548 aaKnown RBP eCLIP17.6■□□□□ 0.41
COLCA2-207ENST00000639470 CST3P01034 146 aaPredicted RBP17.6■□□□□ 0.41
COLCA2-207ENST00000639470 HMGA1P17096 107 aaKnown RBP17.6■□□□□ 0.41
COLCA2-207ENST00000639470 LMO2P25791 158 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 HOXC13P31276 330 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 RBP5P82980 135 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 AMPD3Q01432 767 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 SNRNP35Q16560 246 aaKnown RBP17.6■□□□□ 0.41
COLCA2-207ENST00000639470 WDR44Q5JSH3 913 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 LRRC52Q8N7C0 313 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 KIAA0895Q8NCT3 520 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 GDPD2Q9HCC8 539 aa17.6■□□□□ 0.41
COLCA2-207ENST00000639470 COL4A2P08572 1712 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 SLC38A8A6NNN8 435 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 PROB1E7EW31 1015 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 HUS1O60921 280 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 PRPF40AO75400 957 aaKnown RBP17.59■□□□□ 0.41
COLCA2-207ENST00000639470 SP9P0CG40 484 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 PSMC3P17980 439 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 PNPLA4P41247 253 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 PFKPQ01813 784 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 PRKCQQ04759 706 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 CYP24A1Q07973 514 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 STK4Q13043 487 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 INTS6LQ5JSJ4 861 aaKnown RBP17.59■□□□□ 0.41
COLCA2-207ENST00000639470 TSSK4Q6SA08 328 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 STXBP4Q6ZWJ1 553 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 C1orf210Q8IVY1 113 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 ZNF687Q8N1G0 1237 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 LEMD2Q8NC56 503 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 CACTINQ8WUQ7 758 aaKnown RBP17.59■□□□□ 0.41
COLCA2-207ENST00000639470 HPDLQ96IR7 371 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 SHDQ96IW2 340 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 ANKRD36BP1Q96IX9 119 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 MRPL45Q9BRJ2 306 aaKnown RBP17.59■□□□□ 0.41
COLCA2-207ENST00000639470 SLC46A2Q9BY10 475 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 LRRC27Q9C0I9 530 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 GOLPH3LQ9H4A5 285 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 TRPV4Q9HBA0 871 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 GDAP2Q9NXN4 497 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 MAGED2Q9UNF1 606 aaPredicted RBP17.59■□□□□ 0.41
COLCA2-207ENST00000639470 PCDHB5Q9Y5E4 795 aa17.59■□□□□ 0.41
COLCA2-207ENST00000639470 TADA3O75528 432 aa17.58■□□□□ 0.4
COLCA2-207ENST00000639470 PDGFRBP09619 1106 aa17.58■□□□□ 0.4
COLCA2-207ENST00000639470 PAX3P23760 479 aa17.58■□□□□ 0.4
COLCA2-207ENST00000639470 TNK2Q07912 1038 aa17.58■□□□□ 0.4
COLCA2-207ENST00000639470 KMT5BQ4FZB7 885 aa17.58■□□□□ 0.4
COLCA2-207ENST00000639470 TRAPPC11Q7Z392 1133 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms