RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 SSO1P32867 290 aa-1.5□□□□□ -2.65
snR48snR48 ERG10P41338 398 aaKnown RBP-1.5□□□□□ -2.65
snR48snR48 APS3P47064 194 aa-1.5□□□□□ -2.65
snR48snR48 MDM32Q12171 622 aa-1.5□□□□□ -2.65
snR48snR48 NTG1P31378 399 aa-1.51□□□□□ -2.65
snR48snR48 LDB7P38210 180 aa-1.51□□□□□ -2.65
snR48snR48 DML1Q03652 475 aa-1.51□□□□□ -2.65
snR48snR48 YLR422WQ06409 1932 aa-1.51□□□□□ -2.65
snR48snR48 LAA1P39526 2014 aa-1.52□□□□□ -2.65
snR48snR48 RPL28P02406 149 aaKnown RBP-1.52□□□□□ -2.65
snR48snR48 TAF2P23255 1407 aa-1.53□□□□□ -2.65
snR48snR48 CAF4P36130 643 aa-1.53□□□□□ -2.65
snR48snR48 YCR087C-AP37263 153 aa-1.53□□□□□ -2.65
snR48snR48 RTR1P40084 226 aaPredicted RBP-1.53□□□□□ -2.65
snR48snR48 COX15P40086 486 aa-1.53□□□□□ -2.65
snR48snR48 FUS2Q05670 677 aa-1.53□□□□□ -2.65
snR48snR48 RIF1P29539 1916 aa-1.54□□□□□ -2.66
snR48snR48 RHO1P06780 209 aaKnown RBP-1.54□□□□□ -2.66
snR48snR48 MER1P16523 270 aa-1.54□□□□□ -2.66
snR48snR48 RPO26P20435 155 aa-1.54□□□□□ -2.66
snR48snR48 YJL009WP47078 108 aa-1.54□□□□□ -2.66
snR48snR48 MIC26P50087 233 aa-1.54□□□□□ -2.66
snR48snR48 SOL1P50278 321 aa-1.54□□□□□ -2.66
snR48snR48 SBH1P52870 82 aa-1.54□□□□□ -2.66
snR48snR48 ERV25P54837 211 aaKnown RBP-1.54□□□□□ -2.66
snR48snR48 GRX5Q02784 150 aa-1.54□□□□□ -2.66
snR48snR48 GRE1Q08969 168 aa-1.54□□□□□ -2.66
snR48snR48 YDL157CQ12082 118 aa-1.54□□□□□ -2.66
snR48snR48 DAS2Q12084 232 aa-1.54□□□□□ -2.66
snR48snR48 GSC2P40989 1895 aa-1.54□□□□□ -2.66
snR48snR48 TRM5P38793 499 aa-1.55□□□□□ -2.66
snR48snR48 MVB12P42939 101 aa-1.55□□□□□ -2.66
snR48snR48 SKI6P46948 246 aaPredicted RBP-1.55□□□□□ -2.66
snR48snR48 GPI17Q04080 534 aa-1.55□□□□□ -2.66
snR48snR48 YLR036CQ07986 203 aa-1.55□□□□□ -2.66
snR48snR48 GCY1P14065 312 aaKnown RBP RIP-Chip data-1.56□□□□□ -2.66not detected
snR48snR48 RRT1P38192 103 aa-1.56□□□□□ -2.66
snR48snR48 GEP7P53171 287 aa-1.56□□□□□ -2.66
snR48snR48 HUG1Q6Q5K6 68 aa-1.56□□□□□ -2.66
snR48snR48 FAS2P19097 1887 aaKnown RBP-1.56□□□□□ -2.66
snR48snR48 MBF1O14467 151 aaKnown RBP-1.57□□□□□ -2.66
snR48snR48 NSA2P40078 261 aaKnown RBP-1.57□□□□□ -2.66
snR48snR48 RTC4P53850 401 aa-1.57□□□□□ -2.66
snR48snR48 ATP20Q12233 115 aa-1.57□□□□□ -2.66
snR48snR48 YFL019CP43576 117 aa-1.58□□□□□ -2.66
snR48snR48 RPC17P47076 161 aa-1.58□□□□□ -2.66
snR48snR48 RIM9Q04734 239 aa-1.58□□□□□ -2.66
snR48snR48 COA6Q3E846 104 aa-1.58□□□□□ -2.66
snR48snR48 CNB1P25296 175 aa-1.59□□□□□ -2.66
snR48snR48 NSG1P38837 291 aa-1.59□□□□□ -2.66
snR48snR48 RFC4P40339 323 aaKnown RBP-1.59□□□□□ -2.66
snR48snR48 MYO1P08964 1928 aa-1.6□□□□□ -2.66
snR48snR48 HSL1P34244 1518 aa-1.6□□□□□ -2.67
snR48snR48 RPS24AP0CX31 135 aaKnown RBP-1.6□□□□□ -2.67
snR48snR48 RPS24BP0CX32 135 aaKnown RBP-1.6□□□□□ -2.67
snR48snR48 MATALPHA1P0CY06 175 aa-1.6□□□□□ -2.67
snR48snR48 HMLALPHA1P0CY07 175 aa-1.6□□□□□ -2.67
snR48snR48 PHO13P19881 312 aa-1.6□□□□□ -2.67
snR48snR48 YMR31P19955 123 aa-1.6□□□□□ -2.67
snR48snR48 YRA2P36036 203 aaKnown RBP RIP-Chip data-1.6□□□□□ -2.67not detected
snR48snR48 RPS25BP0C0T4 108 aaKnown RBP-1.61□□□□□ -2.67
snR48snR48 SPS18P32572 300 aa-1.61□□□□□ -2.67
snR48snR48 MIC12P38341 106 aa-1.61□□□□□ -2.67
snR48snR48 YGR269WP40326 108 aa-1.61□□□□□ -2.67
snR48snR48 OTU1P43558 301 aa-1.61□□□□□ -2.67
snR48snR48 IRC18P47056 224 aa-1.61□□□□□ -2.67
snR48snR48 FIT3Q08907 204 aa-1.61□□□□□ -2.67
snR48snR48 RPS25AQ3E792 108 aaPredicted RBP-1.61□□□□□ -2.67
snR48snR48 POL2P21951 2222 aaKnown RBP-1.62□□□□□ -2.67
snR48snR48 HYP2P23301 157 aaKnown RBP-1.62□□□□□ -2.67
snR48snR48 TAF14P35189 244 aa-1.62□□□□□ -2.67
snR48snR48 FIP1P45976 327 aa-1.62□□□□□ -2.67
snR48snR48 TDA4P47153 279 aa-1.62□□□□□ -2.67
snR48snR48 YLR031WQ07978 186 aa-1.62□□□□□ -2.67
snR48snR48 YOR381W-AQ3E804 55 aa-1.62□□□□□ -2.67
snR48snR48 CDC33P07260 213 aaKnown RBP-1.63□□□□□ -2.67
snR48snR48 MATALPHA2P0CY08 210 aa-1.63□□□□□ -2.67
snR48snR48 HMLALPHA2P0CY09 210 aa-1.63□□□□□ -2.67
snR48snR48 ATG8P38182 117 aaRIP-Chip data-1.63□□□□□ -2.67not detected
snR48snR48 YEL014CP39999 101 aa-1.63□□□□□ -2.67
snR48snR48 YML079WQ03629 201 aa-1.63□□□□□ -2.67
snR48snR48 IRC21Q04772 201 aa-1.63□□□□□ -2.67
snR48snR48 YBR056W-AI2HB52 66 aa-1.64□□□□□ -2.67
snR48snR48 THP2O13539 261 aaKnown RBP-1.64□□□□□ -2.67
snR48snR48 YCR016WP25617 290 aaKnown RBP-1.64□□□□□ -2.67
snR48snR48 HSP30P25619 332 aa-1.64□□□□□ -2.67
snR48snR48 SPT14P32363 452 aa-1.64□□□□□ -2.67
snR48snR48 VMA6P32366 345 aaKnown RBP-1.64□□□□□ -2.67
snR48snR48 AUA1P32450 94 aa-1.64□□□□□ -2.67
snR48snR48 HSP150P32478 413 aa-1.64□□□□□ -2.67
snR48snR48 NRK1P53915 240 aa-1.64□□□□□ -2.67
snR48snR48 GAL83Q04739 417 aa-1.64□□□□□ -2.67
snR48snR48 KAP95Q06142 861 aaKnown RBP-1.64□□□□□ -2.67
snR48snR48 CMC4Q3E7A9 73 aa-1.64□□□□□ -2.67
snR48snR48 PRP18P33411 251 aaPredicted RBP-1.65□□□□□ -2.67
snR48snR48 FMC1P40491 155 aa-1.65□□□□□ -2.67
snR48snR48 YMR315WQ04869 349 aaKnown RBP-1.65□□□□□ -2.67
snR48snR48 RPL33AP05744 107 aaKnown RBP-1.66□□□□□ -2.68
snR48snR48 TMA22P47089 198 aaPredicted RBP-1.66□□□□□ -2.68
snR48snR48 VPS28Q02767 242 aa-1.66□□□□□ -2.68
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms