RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W CAT5P41735 233 aa1.25□□□□□ -2.21
CTF4YPR135W FAR7P43592 221 aa1.25□□□□□ -2.21
CTF4YPR135W RPA43P46669 326 aa1.25□□□□□ -2.21
CTF4YPR135W SIP18P50263 79 aa1.25□□□□□ -2.21
CTF4YPR135W NCE101Q02820 53 aa1.25□□□□□ -2.21
CTF4YPR135W SPC24Q04477 213 aa1.25□□□□□ -2.21
CTF4YPR135W DYN3Q04949 312 aa1.25□□□□□ -2.21
CTF4YPR135W YDR278CQ05612 105 aa1.25□□□□□ -2.21
CTF4YPR135W ECM19Q06011 112 aa1.25□□□□□ -2.21
CTF4YPR135W YLR179CQ06252 201 aaKnown RBP1.25□□□□□ -2.21
CTF4YPR135W RIO1Q12196 484 aaKnown RBP1.25□□□□□ -2.21
CTF4YPR135W JID1Q12350 301 aa1.25□□□□□ -2.21
CTF4YPR135W PSF1Q12488 208 aa1.25□□□□□ -2.21
CTF4YPR135W RPL21BQ12672 160 aaKnown RBP1.25□□□□□ -2.21
CTF4YPR135W CDC7P06243 507 aa1.25□□□□□ -2.21
CTF4YPR135W PTM1P32857 523 aa1.25□□□□□ -2.21
CTF4YPR135W UPS2P35200 230 aa1.25□□□□□ -2.21
CTF4YPR135W SFK1P35735 353 aa1.25□□□□□ -2.21
CTF4YPR135W KRE9P39005 276 aa1.25□□□□□ -2.21
CTF4YPR135W ARP3P47117 449 aaKnown RBP1.25□□□□□ -2.21
CTF4YPR135W YGR042WP53227 271 aa1.25□□□□□ -2.21
CTF4YPR135W RCF2P53721 224 aa1.25□□□□□ -2.21
CTF4YPR135W MRX11Q03079 207 aa1.25□□□□□ -2.21
CTF4YPR135W RCE1Q03530 315 aa1.25□□□□□ -2.21
CTF4YPR135W INP1Q03694 420 aa1.25□□□□□ -2.21
CTF4YPR135W YCL048W-AQ2V2Q2 79 aa1.25□□□□□ -2.21
CTF4YPR135W YBL008W-AQ3E821 79 aa1.25□□□□□ -2.21
CTF4YPR135W RIB3Q99258 208 aa1.25□□□□□ -2.21
CTF4YPR135W RPS23AP0CX29 145 aaKnown RBP1.24□□□□□ -2.21
CTF4YPR135W RPS23BP0CX30 145 aa1.24□□□□□ -2.21
CTF4YPR135W SMP1P38128 452 aa1.24□□□□□ -2.21
CTF4YPR135W TRS20P38334 175 aa1.24□□□□□ -2.21
CTF4YPR135W EFM1P38732 585 aa1.24□□□□□ -2.21
CTF4YPR135W DOG2P38773 246 aa1.24□□□□□ -2.21
CTF4YPR135W MIG3P39943 394 aa1.24□□□□□ -2.21
CTF4YPR135W YPI1P43587 155 aa1.24□□□□□ -2.21
CTF4YPR135W YGL204CP53089 101 aa1.24□□□□□ -2.21
CTF4YPR135W RNH201P53942 307 aa1.24□□□□□ -2.21
CTF4YPR135W SWP1Q02795 286 aa1.24□□□□□ -2.21
CTF4YPR135W GOT1Q03554 138 aa1.24□□□□□ -2.21
CTF4YPR135W FMN1Q03778 218 aa1.24□□□□□ -2.21
CTF4YPR135W HNT1Q04344 158 aaKnown RBP1.24□□□□□ -2.21
CTF4YPR135W PRP11Q07350 266 aaPredicted RBP1.24□□□□□ -2.21
CTF4YPR135W MCH1Q07376 486 aa1.24□□□□□ -2.21
CTF4YPR135W RFU1Q08003 200 aa1.24□□□□□ -2.21
CTF4YPR135W YOL085CQ99345 113 aa1.24□□□□□ -2.21
CTF4YPR135W SEN2P16658 377 aa1.24□□□□□ -2.21
CTF4YPR135W CNB1P25296 175 aa1.24□□□□□ -2.21
CTF4YPR135W MSA2P36157 363 aa1.24□□□□□ -2.21
CTF4YPR135W CSH1P38287 376 aa1.24□□□□□ -2.21
CTF4YPR135W IPI1P38803 334 aaPredicted RBP1.24□□□□□ -2.21
CTF4YPR135W NSG1P38837 291 aa1.24□□□□□ -2.21
CTF4YPR135W YER084WP40057 128 aa1.24□□□□□ -2.21
CTF4YPR135W YJL028WP47062 111 aa1.24□□□□□ -2.21
CTF4YPR135W BOL2P53082 120 aa1.24□□□□□ -2.21
CTF4YPR135W YDR124WQ04608 324 aa1.24□□□□□ -2.21
CTF4YPR135W YOL019WQ08157 551 aa1.24□□□□□ -2.21
CTF4YPR135W YFR032C-BQ8TGU2 87 aa1.24□□□□□ -2.21
CTF4YPR135W DDP1Q99321 188 aaKnown RBP1.24□□□□□ -2.21
CTF4YPR135W RAS2P01120 322 aaKnown RBP1.23□□□□□ -2.21
CTF4YPR135W UBI4P0CG63 381 aaKnown RBP1.23□□□□□ -2.21
CTF4YPR135W SEC22P22214 214 aa1.23□□□□□ -2.21
CTF4YPR135W AHC2P25649 128 aa1.23□□□□□ -2.21
CTF4YPR135W ZRT3P34240 503 aa1.23□□□□□ -2.21
CTF4YPR135W UTP30P36144 274 aaKnown RBP1.23□□□□□ -2.21
CTF4YPR135W SSH1P38353 490 aaKnown RBP1.23□□□□□ -2.21
CTF4YPR135W YGR201CP42936 225 aa1.23□□□□□ -2.21
CTF4YPR135W COS6P53344 381 aa1.23□□□□□ -2.21
CTF4YPR135W YNL010WP53981 241 aaKnown RBP1.23□□□□□ -2.21
CTF4YPR135W RPL21AQ02753 160 aaKnown RBP1.23□□□□□ -2.21
CTF4YPR135W AIM34Q03673 198 aa1.23□□□□□ -2.21
CTF4YPR135W TSA2Q04120 196 aa1.23□□□□□ -2.21
CTF4YPR135W YDR115WQ04598 105 aa1.23□□□□□ -2.21
CTF4YPR135W NIP7Q08962 181 aaKnown RBP1.23□□□□□ -2.21
CTF4YPR135W YPS3Q12303 508 aa1.23□□□□□ -2.21
CTF4YPR135W PRR2Q12310 699 aa1.23□□□□□ -2.21
CTF4YPR135W YPL247CQ12523 523 aa1.23□□□□□ -2.21
CTF4YPR135W DFM1Q12743 341 aaKnown RBP1.23□□□□□ -2.21
CTF4YPR135W SWD3P38123 315 aa1.23□□□□□ -2.21
CTF4YPR135W FIP1P45976 327 aa1.23□□□□□ -2.21
CTF4YPR135W VMA10P48836 114 aaKnown RBP1.23□□□□□ -2.21
CTF4YPR135W UFD1P53044 361 aa1.23□□□□□ -2.21
CTF4YPR135W SWT21P53873 357 aaPredicted RBP1.23□□□□□ -2.21
CTF4YPR135W GPI17Q04080 534 aa1.23□□□□□ -2.21
CTF4YPR135W YMR320WQ04897 101 aa1.23□□□□□ -2.21
CTF4YPR135W MHT1Q12525 324 aa1.23□□□□□ -2.21
CTF4YPR135W MHF1Q3E835 90 aa1.23□□□□□ -2.21
CTF4YPR135W SIR2P06700 562 aa1.22□□□□□ -2.21
CTF4YPR135W PET9P18239 318 aaKnown RBP1.22□□□□□ -2.21
CTF4YPR135W TOM40P23644 387 aaKnown RBP1.22□□□□□ -2.21
CTF4YPR135W SUA7P29055 345 aaPredicted RBP1.22□□□□□ -2.21
CTF4YPR135W ERG2P32352 222 aa1.22□□□□□ -2.21
CTF4YPR135W SEC17P32602 292 aa1.22□□□□□ -2.21
CTF4YPR135W AVT6P40074 448 aa1.22□□□□□ -2.21
CTF4YPR135W SYS1P41544 203 aa1.22□□□□□ -2.21
CTF4YPR135W YFL012WP43580 148 aa1.22□□□□□ -2.21
CTF4YPR135W YFR054CP43622 192 aa1.22□□□□□ -2.21
CTF4YPR135W ORM1P53224 222 aa1.22□□□□□ -2.21
CTF4YPR135W GRH1Q04410 372 aaKnown RBP1.22□□□□□ -2.21
CTF4YPR135W MRX8Q05473 314 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms