RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W DML1Q03652 475 aa-1.12□□□□□ -2.59
RDS3YPR094W DYN3Q04949 312 aa-1.12□□□□□ -2.59
RDS3YPR094W YOL014WQ08110 124 aa-1.12□□□□□ -2.59
RDS3YPR094W ATG41Q12048 136 aa-1.12□□□□□ -2.59
RDS3YPR094W HUG1Q6Q5K6 68 aa-1.12□□□□□ -2.59
RDS3YPR094W RHO1P06780 209 aaKnown RBP-1.13□□□□□ -2.59
RDS3YPR094W TPM1P17536 199 aaKnown RBP-1.13□□□□□ -2.59
RDS3YPR094W MTW1P39731 289 aa-1.13□□□□□ -2.59
RDS3YPR094W EMC2P47133 292 aaKnown RBP-1.13□□□□□ -2.59
RDS3YPR094W BRR6P53062 197 aa-1.13□□□□□ -2.59
RDS3YPR094W FYV6P53913 173 aa-1.13□□□□□ -2.59
RDS3YPR094W GPI17Q04080 534 aa-1.13□□□□□ -2.59
RDS3YPR094W YIL002W-AQ3E7Z5 69 aa-1.13□□□□□ -2.59
RDS3YPR094W PHO13P19881 312 aa-1.14□□□□□ -2.59
RDS3YPR094W MAG1P22134 296 aaKnown RBP-1.14□□□□□ -2.59
RDS3YPR094W MRPL25P23369 157 aa-1.14□□□□□ -2.59
RDS3YPR094W CDC39P25655 2108 aaKnown RBP-1.14□□□□□ -2.59
RDS3YPR094W ATG8P38182 117 aaRIP-Chip data-1.14□□□□□ -2.59not detected
RDS3YPR094W RTT105P40063 208 aa-1.14□□□□□ -2.59
RDS3YPR094W OTU1P43558 301 aa-1.14□□□□□ -2.59
RDS3YPR094W ADO1P47143 340 aaKnown RBP-1.14□□□□□ -2.59
RDS3YPR094W ALG13P53178 202 aa-1.14□□□□□ -2.59
RDS3YPR094W EGD1Q02642 157 aaKnown RBP-1.14□□□□□ -2.59
RDS3YPR094W ATG31Q12421 196 aa-1.14□□□□□ -2.59
RDS3YPR094W YOL164W-AQ3E7A5 60 aa-1.14□□□□□ -2.59
RDS3YPR094W UTP20P35194 2493 aaKnown RBP-1.15□□□□□ -2.59
RDS3YPR094W RPL25P04456 142 aaKnown RBP-1.15□□□□□ -2.59
RDS3YPR094W RPO26P20435 155 aa-1.15□□□□□ -2.59
RDS3YPR094W MRPL37P36532 105 aa-1.15□□□□□ -2.59
RDS3YPR094W HMF1P40037 129 aaKnown RBP-1.15□□□□□ -2.59
RDS3YPR094W LSM7P53905 115 aaKnown RBP-1.15□□□□□ -2.59
RDS3YPR094W DAS2Q12084 232 aa-1.15□□□□□ -2.59
RDS3YPR094W YML100W-AQ8TGT0 57 aa-1.15□□□□□ -2.59
RDS3YPR094W TAF2P23255 1407 aa-1.15□□□□□ -2.59
RDS3YPR094W MEC1P38111 2368 aa-1.15□□□□□ -2.59
RDS3YPR094W STF1P01098 86 aa-1.16□□□□□ -2.6
RDS3YPR094W GCN3P14741 305 aa-1.16□□□□□ -2.6
RDS3YPR094W RRT1P38192 103 aa-1.16□□□□□ -2.6
RDS3YPR094W NSG1P38837 291 aa-1.16□□□□□ -2.6
RDS3YPR094W GLR1P41921 483 aaKnown RBP-1.16□□□□□ -2.6
RDS3YPR094W FIP1P45976 327 aa-1.16□□□□□ -2.6
RDS3YPR094W SKI6P46948 246 aaPredicted RBP-1.16□□□□□ -2.6
RDS3YPR094W KRE28Q04431 385 aa-1.16□□□□□ -2.6
RDS3YPR094W ATP20Q12233 115 aa-1.16□□□□□ -2.6
RDS3YPR094W RIB3Q99258 208 aa-1.16□□□□□ -2.6
RDS3YPR094W BRR2P32639 2163 aaKnown RBP-1.17□□□□□ -2.6
RDS3YPR094W NTG1P31378 399 aa-1.17□□□□□ -2.6
RDS3YPR094W TAF14P35189 244 aa-1.17□□□□□ -2.6
RDS3YPR094W AIM2P39721 246 aa-1.17□□□□□ -2.6
RDS3YPR094W YJL009WP47078 108 aa-1.17□□□□□ -2.6
RDS3YPR094W RTC4P53850 401 aa-1.17□□□□□ -2.6
RDS3YPR094W RIM9Q04734 239 aa-1.17□□□□□ -2.6
RDS3YPR094W PAM18Q07914 168 aa-1.17□□□□□ -2.6
RDS3YPR094W YOR381W-AQ3E804 55 aa-1.17□□□□□ -2.6
RDS3YPR094W MER1P16523 270 aa-1.18□□□□□ -2.6
RDS3YPR094W CNB1P25296 175 aa-1.18□□□□□ -2.6
RDS3YPR094W MRPL24P36525 258 aaPredicted RBP-1.18□□□□□ -2.6
RDS3YPR094W YFL019CP43576 117 aa-1.18□□□□□ -2.6
RDS3YPR094W ARO80Q04052 950 aa-1.18□□□□□ -2.6
RDS3YPR094W YPR127WQ06494 345 aa-1.18□□□□□ -2.6
RDS3YPR094W FIT3Q08907 204 aa-1.18□□□□□ -2.6
RDS3YPR094W CMC4Q3E7A9 73 aa-1.18□□□□□ -2.6
RDS3YPR094W COA6Q3E846 104 aa-1.18□□□□□ -2.6
RDS3YPR094W HSL1P34244 1518 aa-1.19□□□□□ -2.6
RDS3YPR094W CDC33P07260 213 aaKnown RBP-1.19□□□□□ -2.6
RDS3YPR094W YRA2P36036 203 aaKnown RBP RIP-Chip data-1.19□□□□□ -2.6not detected
RDS3YPR094W LDB7P38210 180 aa-1.19□□□□□ -2.6
RDS3YPR094W NSA2P40078 261 aaKnown RBP-1.19□□□□□ -2.6
RDS3YPR094W RFC4P40339 323 aaKnown RBP-1.19□□□□□ -2.6
RDS3YPR094W GLC8P41818 229 aa-1.19□□□□□ -2.6
RDS3YPR094W MIC26P50087 233 aa-1.19□□□□□ -2.6
RDS3YPR094W SBH1P52870 82 aa-1.19□□□□□ -2.6
RDS3YPR094W YLR194CQ05777 254 aa-1.19□□□□□ -2.6
RDS3YPR094W YDL157CQ12082 118 aa-1.19□□□□□ -2.6
RDS3YPR094W MBF1O14467 151 aaKnown RBP-1.2□□□□□ -2.6
RDS3YPR094W RPS25BP0C0T4 108 aaKnown RBP-1.2□□□□□ -2.6
RDS3YPR094W SPT14P32363 452 aa-1.2□□□□□ -2.6
RDS3YPR094W YCR087C-AP37263 153 aa-1.2□□□□□ -2.6
RDS3YPR094W RTR1P40084 226 aaPredicted RBP-1.2□□□□□ -2.6
RDS3YPR094W BNA6P43619 295 aa-1.2□□□□□ -2.6
RDS3YPR094W RPC17P47076 161 aa-1.2□□□□□ -2.6
RDS3YPR094W TDA4P47153 279 aa-1.2□□□□□ -2.6
RDS3YPR094W GEP7P53171 287 aa-1.2□□□□□ -2.6
RDS3YPR094W RPS25AQ3E792 108 aaPredicted RBP-1.2□□□□□ -2.6
RDS3YPR094W IGO2Q9P305 131 aa-1.2□□□□□ -2.6
RDS3YPR094W IRA1P18963 3092 aa-1.2□□□□□ -2.6
RDS3YPR094W RPL33AP05744 107 aaKnown RBP-1.21□□□□□ -2.6
RDS3YPR094W HSP150P32478 413 aa-1.21□□□□□ -2.6
RDS3YPR094W SSO1P32867 290 aa-1.21□□□□□ -2.6
RDS3YPR094W YEL014CP39999 101 aa-1.21□□□□□ -2.6
RDS3YPR094W YGR269WP40326 108 aa-1.21□□□□□ -2.6
RDS3YPR094W YFR035CP43608 114 aa-1.21□□□□□ -2.6
RDS3YPR094W ERV25P54837 211 aaKnown RBP-1.21□□□□□ -2.6
RDS3YPR094W YMR315WQ04869 349 aaKnown RBP-1.21□□□□□ -2.6
RDS3YPR094W FUS2Q05670 677 aa-1.21□□□□□ -2.6
RDS3YPR094W MDM32Q12171 622 aa-1.21□□□□□ -2.6
RDS3YPR094W SEC16P48415 2195 aaKnown RBP-1.21□□□□□ -2.6
RDS3YPR094W RPL28P02406 149 aaKnown RBP-1.22□□□□□ -2.6
RDS3YPR094W GCY1P14065 312 aaKnown RBP RIP-Chip data-1.22□□□□□ -2.6not detected
RDS3YPR094W HYP2P23301 157 aaKnown RBP-1.22□□□□□ -2.6
Retrieved 100 of 5,963 RNA–protein pairs in 90.9 ms