RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	CTR3	Q06686	241 aa		7.85	□□□□□ -1.15
TIF6	YPR016C	RKI1	Q12189	258 aa		7.85	□□□□□ -1.15
TIF6	YPR016C	MSK1	P32048	576 aa		7.84	□□□□□ -1.15
TIF6	YPR016C	QDR3	P38227	689 aa		7.84	□□□□□ -1.15
TIF6	YPR016C	TIF11	P38912	153 aa	Known RBP	7.84	□□□□□ -1.15
TIF6	YPR016C	SPC25	P40014	221 aa		7.84	□□□□□ -1.15
TIF6	YPR016C	MCM22	P47167	239 aa		7.84	□□□□□ -1.15
TIF6	YPR016C	YAP1802	P53309	568 aa		7.84	□□□□□ -1.15
TIF6	YPR016C	YMR007W	Q03675	126 aa		7.84	□□□□□ -1.15
TIF6	YPR016C	IRC23	Q08416	157 aa		7.84	□□□□□ -1.15
TIF6	YPR016C	RAD28	Q12021	506 aa		7.84	□□□□□ -1.15
TIF6	YPR016C	COX19	Q3E731	98 aa		7.84	□□□□□ -1.15
TIF6	YPR016C	YMR316C-A	I2HB70	103 aa		7.83	□□□□□ -1.16
TIF6	YPR016C	ILV5	P06168	395 aa	Known RBP	7.83	□□□□□ -1.16
TIF6	YPR016C	YPS1	P32329	569 aa		7.83	□□□□□ -1.16
TIF6	YPR016C	YBL059W	P34224	193 aa		7.83	□□□□□ -1.16
TIF6	YPR016C	YBL071C	P38185	102 aa		7.83	□□□□□ -1.16
TIF6	YPR016C	YAR068W	P39564	161 aa		7.83	□□□□□ -1.16
TIF6	YPR016C	GNP1	P48813	663 aa		7.83	□□□□□ -1.16
TIF6	YPR016C	BOR1	P53838	576 aa		7.83	□□□□□ -1.16
TIF6	YPR016C	TMA23	Q03525	211 aa		7.83	□□□□□ -1.16
TIF6	YPR016C	SHH3	Q04487	196 aa		7.83	□□□□□ -1.16
TIF6	YPR016C	PBP4	Q07362	185 aa	Known RBP	7.83	□□□□□ -1.16
TIF6	YPR016C	QCR9	P22289	66 aa		7.82	□□□□□ -1.16
TIF6	YPR016C	SHB17	P36136	271 aa	Known RBP	7.82	□□□□□ -1.16
TIF6	YPR016C	SHG1	P38337	142 aa		7.82	□□□□□ -1.16
TIF6	YPR016C	PTC7	P38797	343 aa		7.82	□□□□□ -1.16
TIF6	YPR016C	MIC27	P50945	234 aa		7.82	□□□□□ -1.16
TIF6	YPR016C	DUG3	P53871	357 aa		7.82	□□□□□ -1.16
TIF6	YPR016C	AVO2	Q04749	426 aa		7.82	□□□□□ -1.16
TIF6	YPR016C	VMA9	Q3E7B6	73 aa		7.82	□□□□□ -1.16
TIF6	YPR016C	PIS1	P06197	220 aa	Known RBP	7.81	□□□□□ -1.16
TIF6	YPR016C	YCR041W	P37265	110 aa		7.81	□□□□□ -1.16
TIF6	YPR016C	DER1	P38307	211 aa		7.81	□□□□□ -1.16
TIF6	YPR016C	BDH1	P39714	382 aa		7.81	□□□□□ -1.16
TIF6	YPR016C	LST7	P53237	242 aa		7.81	□□□□□ -1.16
TIF6	YPR016C	RXT3	Q07458	294 aa		7.81	□□□□□ -1.16
TIF6	YPR016C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	7.8	□□□□□ -1.16	not detected
TIF6	YPR016C	FPR2	P32472	135 aa		7.8	□□□□□ -1.16
TIF6	YPR016C	ECM25	P32525	599 aa		7.8	□□□□□ -1.16
TIF6	YPR016C	SRB6	P32570	121 aa		7.8	□□□□□ -1.16
TIF6	YPR016C	RPL14A	P36105	138 aa	Known RBP	7.8	□□□□□ -1.16
TIF6	YPR016C	PRS4	P38063	326 aa	Predicted RBP	7.8	□□□□□ -1.16
TIF6	YPR016C	RIB5	P38145	238 aa		7.8	□□□□□ -1.16
TIF6	YPR016C	RPL14B	P38754	138 aa	Known RBP	7.8	□□□□□ -1.16
TIF6	YPR016C	YGR018C	P53211	109 aa		7.8	□□□□□ -1.16
TIF6	YPR016C	SDO1	Q07953	250 aa	Known RBP	7.8	□□□□□ -1.16
TIF6	YPR016C	SME1	Q12330	94 aa	Predicted RBP	7.8	□□□□□ -1.16
TIF6	YPR016C	TY1A-DR3	Q12441	440 aa		7.8	□□□□□ -1.16
TIF6	YPR016C	YCR022C	P25620	114 aa		7.79	□□□□□ -1.16
TIF6	YPR016C	INO2	P26798	304 aa		7.79	□□□□□ -1.16
TIF6	YPR016C	CDS1	P38221	457 aa		7.79	□□□□□ -1.16
TIF6	YPR016C	DOG2	P38773	246 aa		7.79	□□□□□ -1.16
TIF6	YPR016C	DOG1	P38774	246 aa		7.79	□□□□□ -1.16
TIF6	YPR016C	RIB4	P50861	169 aa	Predicted RBP	7.79	□□□□□ -1.16
TIF6	YPR016C	ISU1	Q03020	165 aa		7.79	□□□□□ -1.16
TIF6	YPR016C	YML122C	Q03207	126 aa		7.79	□□□□□ -1.16
TIF6	YPR016C	YOR352W	Q08816	343 aa		7.79	□□□□□ -1.16
TIF6	YPR016C	LDS1	P31379	325 aa		7.78	□□□□□ -1.16
TIF6	YPR016C	DAL3	P32459	195 aa		7.78	□□□□□ -1.16
TIF6	YPR016C	YKL075C	P36083	450 aa		7.78	□□□□□ -1.16
TIF6	YPR016C	AVT5	P38176	459 aa		7.78	□□□□□ -1.16
TIF6	YPR016C	RRT1	P38192	103 aa		7.78	□□□□□ -1.16
TIF6	YPR016C	CSH1	P38287	376 aa		7.78	□□□□□ -1.16
TIF6	YPR016C	RTS2	P40962	232 aa		7.78	□□□□□ -1.16
TIF6	YPR016C	SMD3	P43321	101 aa	Known RBP	7.78	□□□□□ -1.16
TIF6	YPR016C	CAF40	P53829	373 aa		7.78	□□□□□ -1.16
TIF6	YPR016C	SWT21	P53873	357 aa	Predicted RBP	7.78	□□□□□ -1.16
TIF6	YPR016C	SPG4	Q04438	115 aa		7.78	□□□□□ -1.16
TIF6	YPR016C	MRP2	P10663	115 aa	Predicted RBP	7.77	□□□□□ -1.17
TIF6	YPR016C	ATG27	P46989	271 aa		7.77	□□□□□ -1.17
TIF6	YPR016C	TAX4	P47030	604 aa		7.77	□□□□□ -1.17
TIF6	YPR016C	MOT3	P54785	490 aa	Known RBP	7.77	□□□□□ -1.17
TIF6	YPR016C	YMR181C	Q03231	154 aa		7.77	□□□□□ -1.17
TIF6	YPR016C	MSA1	Q08471	629 aa		7.77	□□□□□ -1.17
TIF6	YPR016C	Q0142	Q9ZZW4	58 aa		7.77	□□□□□ -1.17
TIF6	YPR016C	VPS55	P47111	140 aa		7.76	□□□□□ -1.17
TIF6	YPR016C	CPD1	P53314	239 aa		7.76	□□□□□ -1.17
TIF6	YPR016C	PAU4	P53427	120 aa		7.76	□□□□□ -1.17
TIF6	YPR016C	CDC7	P06243	507 aa		7.75	□□□□□ -1.17
TIF6	YPR016C	PET494	P07390	489 aa	Predicted RBP	7.75	□□□□□ -1.17
TIF6	YPR016C	RPS2	P25443	254 aa	Known RBP	7.75	□□□□□ -1.17
TIF6	YPR016C	ALK2	P32789	676 aa	Predicted RBP	7.75	□□□□□ -1.17
TIF6	YPR016C	SNU13	P39990	126 aa	Known RBP	7.75	□□□□□ -1.17
TIF6	YPR016C	SAS2	P40963	338 aa		7.75	□□□□□ -1.17
TIF6	YPR016C	DSK2	P48510	373 aa		7.75	□□□□□ -1.17
TIF6	YPR016C	ATC1	Q04005	294 aa		7.75	□□□□□ -1.17
TIF6	YPR016C	HOR7	Q05827	59 aa		7.75	□□□□□ -1.17
TIF6	YPR016C	YGR219W	P53307	113 aa		7.74	□□□□□ -1.17
TIF6	YPR016C	SDH7	Q04401	133 aa		7.74	□□□□□ -1.17
TIF6	YPR016C	TY1A-DR4	O74302	440 aa		7.73	□□□□□ -1.17
TIF6	YPR016C	PAU1	P0CE88	120 aa		7.73	□□□□□ -1.17
TIF6	YPR016C	PAU14	P0CE89	120 aa		7.73	□□□□□ -1.17
TIF6	YPR016C	PAU6	P0CE90	120 aa		7.73	□□□□□ -1.17
TIF6	YPR016C	PAU18	P0CE91	120 aa		7.73	□□□□□ -1.17
TIF6	YPR016C	PAU8	P0CE92	120 aa		7.73	□□□□□ -1.17
TIF6	YPR016C	PAU11	P0CE93	120 aa		7.73	□□□□□ -1.17
TIF6	YPR016C	TY1A-A	P0CX57	440 aa		7.73	□□□□□ -1.17
TIF6	YPR016C	TY1A-PR1	P0CX58	440 aa		7.73	□□□□□ -1.17
TIF6	YPR016C	TY1A-OR	P0CX59	440 aa		7.73	□□□□□ -1.17

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms