RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W HNT1Q04344 158 aaKnown RBP1.68□□□□□ -2.14
VPS16YPL045W YMR321CQ04898 105 aa1.68□□□□□ -2.14
VPS16YPL045W YPR127WQ06494 345 aa1.68□□□□□ -2.14
VPS16YPL045W PET54P10834 293 aa1.67□□□□□ -2.14
VPS16YPL045W CKS1P20486 150 aaKnown RBP1.67□□□□□ -2.14
VPS16YPL045W TVP38P36164 337 aa1.67□□□□□ -2.14
VPS16YPL045W YER188WP40103 239 aa1.67□□□□□ -2.14
VPS16YPL045W SMD3P43321 101 aaKnown RBP1.67□□□□□ -2.14
VPS16YPL045W MPA43P53583 542 aaPredicted RBP1.67□□□□□ -2.14
VPS16YPL045W SWP1Q02795 286 aa1.67□□□□□ -2.14
VPS16YPL045W YHR032W-AP0C5N6 59 aa1.67□□□□□ -2.14
VPS16YPL045W URA5P13298 226 aaKnown RBP1.67□□□□□ -2.14
VPS16YPL045W PRM10P42946 383 aa1.67□□□□□ -2.14
VPS16YPL045W SKI6P46948 246 aaPredicted RBP1.67□□□□□ -2.14
VPS16YPL045W PIR5P46999 287 aa1.67□□□□□ -2.14
VPS16YPL045W EFG1Q3E705 233 aaKnown RBP1.67□□□□□ -2.14
VPS16YPL045W SAS5Q99314 248 aa1.67□□□□□ -2.14
VPS16YPL045W DDP1Q99321 188 aaKnown RBP1.67□□□□□ -2.14
VPS16YPL045W ATP15P21306 62 aa1.66□□□□□ -2.14
VPS16YPL045W VMA11P32842 164 aa1.66□□□□□ -2.14
VPS16YPL045W SLM6P38343 150 aa1.66□□□□□ -2.14
VPS16YPL045W MED6P38782 295 aa1.66□□□□□ -2.14
VPS16YPL045W SOK1P40317 901 aa1.66□□□□□ -2.14
VPS16YPL045W MOG1P47123 218 aa1.66□□□□□ -2.14
VPS16YPL045W MAK3Q03503 176 aa1.66□□□□□ -2.14
VPS16YPL045W SPC2Q04969 178 aa1.66□□□□□ -2.14
VPS16YPL045W CDC8P00572 216 aa1.66□□□□□ -2.14
VPS16YPL045W RPS23AP0CX29 145 aaKnown RBP1.66□□□□□ -2.14
VPS16YPL045W RPS23BP0CX30 145 aa1.66□□□□□ -2.14
VPS16YPL045W MRPS28P21771 286 aa1.66□□□□□ -2.14
VPS16YPL045W SOL1P50278 321 aa1.66□□□□□ -2.14
VPS16YPL045W YGL088WP53151 121 aa1.66□□□□□ -2.14
VPS16YPL045W CAB4P53332 305 aa1.66□□□□□ -2.14
VPS16YPL045W ECM11Q04110 302 aa1.66□□□□□ -2.14
VPS16YPL045W IES4Q08561 116 aa1.66□□□□□ -2.14
VPS16YPL045W YPR202WQ08993 238 aa1.66□□□□□ -2.14
VPS16YPL045W CCA1P21269 546 aa1.65□□□□□ -2.14
VPS16YPL045W RFC2P40348 353 aa1.65□□□□□ -2.14
VPS16YPL045W YIL059CP40520 121 aa1.65□□□□□ -2.14
VPS16YPL045W GPI14P47088 403 aaKnown RBP1.65□□□□□ -2.14
VPS16YPL045W TDA4P47153 279 aa1.65□□□□□ -2.14
VPS16YPL045W YGR026WP53217 278 aa1.65□□□□□ -2.14
VPS16YPL045W TSC3Q3E790 80 aa1.65□□□□□ -2.14
VPS16YPL045W YPR014CQ6B0W2 109 aa1.65□□□□□ -2.14
VPS16YPL045W TAO3P40468 2376 aa1.65□□□□□ -2.15
VPS16YPL045W TIM9O74700 87 aa1.65□□□□□ -2.15
VPS16YPL045W SOD1P00445 154 aaKnown RBP1.65□□□□□ -2.15
VPS16YPL045W UBI4P0CG63 381 aaKnown RBP1.65□□□□□ -2.15
VPS16YPL045W SPO13P23624 291 aa1.65□□□□□ -2.15
VPS16YPL045W BUB2P26448 306 aaPredicted RBP1.65□□□□□ -2.15
VPS16YPL045W OCH1P31755 480 aa1.65□□□□□ -2.15
VPS16YPL045W MID2P36027 376 aa1.65□□□□□ -2.15
VPS16YPL045W YKR032WP36127 104 aa1.65□□□□□ -2.15
VPS16YPL045W POP7P38291 140 aa1.65□□□□□ -2.15
VPS16YPL045W YER084WP40057 128 aa1.65□□□□□ -2.15
VPS16YPL045W TIF34P40217 347 aaKnown RBP1.65□□□□□ -2.15
VPS16YPL045W YGL101WP53144 215 aa1.65□□□□□ -2.15
VPS16YPL045W AKR2Q12013 749 aa1.65□□□□□ -2.15
VPS16YPL045W YDR524C-BQ3E6R4 66 aa1.65□□□□□ -2.15
VPS16YPL045W YML100W-AQ8TGT0 57 aa1.65□□□□□ -2.15
VPS16YPL045W NUF2P33895 451 aa1.64□□□□□ -2.15
VPS16YPL045W UPS2P35200 230 aa1.64□□□□□ -2.15
VPS16YPL045W MRPL17P36528 281 aa1.64□□□□□ -2.15
VPS16YPL045W AIM2P39721 246 aa1.64□□□□□ -2.15
VPS16YPL045W YIR035CP40579 254 aa1.64□□□□□ -2.15
VPS16YPL045W SER2P42941 309 aa1.64□□□□□ -2.15
VPS16YPL045W SNX4P47057 423 aa1.64□□□□□ -2.15
VPS16YPL045W YDR274CP87283 123 aa1.64□□□□□ -2.15
VPS16YPL045W TMA20P89886 181 aaPredicted RBP1.64□□□□□ -2.15
VPS16YPL045W YOL014WQ08110 124 aa1.64□□□□□ -2.15
VPS16YPL045W YLR046CQ12253 270 aa1.64□□□□□ -2.15
VPS16YPL045W YDL180WQ12301 547 aa1.64□□□□□ -2.15
VPS16YPL045W TOM1Q03280 3268 aa1.64□□□□□ -2.15
VPS16YPL045W CSH1P38287 376 aa1.64□□□□□ -2.15
VPS16YPL045W TVP23P38962 199 aa1.64□□□□□ -2.15
VPS16YPL045W DSK2P48510 373 aa1.64□□□□□ -2.15
VPS16YPL045W AIF1P52923 378 aa1.64□□□□□ -2.15
VPS16YPL045W SPG3Q04398 127 aaPredicted RBP1.64□□□□□ -2.15
VPS16YPL045W YEA4P40004 342 aa1.63□□□□□ -2.15
VPS16YPL045W GIM4P40005 111 aaKnown RBP1.63□□□□□ -2.15
VPS16YPL045W BUD13P46947 266 aaPredicted RBP1.63□□□□□ -2.15
VPS16YPL045W TTI2P47168 421 aa1.63□□□□□ -2.15
VPS16YPL045W YDR476CQ03362 224 aa1.63□□□□□ -2.15
VPS16YPL045W DGK1Q12382 290 aa1.63□□□□□ -2.15
VPS16YPL045W NSG1P38837 291 aa1.63□□□□□ -2.15
VPS16YPL045W AVT2P39981 480 aa1.63□□□□□ -2.15
VPS16YPL045W GVP36P40531 326 aaKnown RBP1.63□□□□□ -2.15
VPS16YPL045W YFL019CP43576 117 aa1.63□□□□□ -2.15
VPS16YPL045W TIM8P57744 87 aa1.63□□□□□ -2.15
VPS16YPL045W PKR1Q03880 122 aaKnown RBP1.63□□□□□ -2.15
VPS16YPL045W THI74Q04083 370 aa1.63□□□□□ -2.15
VPS16YPL045W NAT3Q06504 195 aa1.63□□□□□ -2.15
VPS16YPL045W FEX1Q08913 375 aa1.63□□□□□ -2.15
VPS16YPL045W FEX2Q08991 375 aa1.63□□□□□ -2.15
VPS16YPL045W DAS2Q12084 232 aa1.63□□□□□ -2.15
VPS16YPL045W YOR342CQ12182 319 aa1.63□□□□□ -2.15
VPS16YPL045W CCH1P50077 2039 aa1.63□□□□□ -2.15
VPS16YPL045W UBR1P19812 1950 aa1.62□□□□□ -2.15
VPS16YPL045W MSW1P04803 379 aa1.62□□□□□ -2.15
VPS16YPL045W RPL2AP0CX45 254 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms