RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C YCR025CP25352 136 aa3.55□□□□□ -1.84
VHS3YOR054C ZRT1P32804 376 aa3.55□□□□□ -1.84
VHS3YOR054C YKR070WP36151 352 aaKnown RBP3.55□□□□□ -1.84
VHS3YOR054C WSC4P38739 605 aa3.55□□□□□ -1.84
VHS3YOR054C YHR127WP38833 243 aaKnown RBP3.55□□□□□ -1.84
VHS3YOR054C YHR138CP38841 114 aaPredicted RBP3.55□□□□□ -1.84
VHS3YOR054C SEC72P39742 193 aaKnown RBP3.55□□□□□ -1.84
VHS3YOR054C YNL195CP40168 261 aa3.55□□□□□ -1.84
VHS3YOR054C YIL169CP40442 995 aa3.55□□□□□ -1.84
VHS3YOR054C GZF3P42944 551 aaKnown RBP3.55□□□□□ -1.84
VHS3YOR054C YFL065CP43539 102 aa3.55□□□□□ -1.84
VHS3YOR054C ATG33Q06485 197 aa3.55□□□□□ -1.84
VHS3YOR054C NAT3Q06504 195 aa3.55□□□□□ -1.84
VHS3YOR054C YPR203WQ08994 102 aa3.55□□□□□ -1.84
VHS3YOR054C MCT1Q12283 360 aa3.55□□□□□ -1.84
VHS3YOR054C YIL102C-AQ2V2P5 75 aa3.55□□□□□ -1.84
VHS3YOR054C YCR024C-BQ3E7Z8 88 aa3.55□□□□□ -1.84
VHS3YOR054C VAR1P02381 398 aa3.54□□□□□ -1.84
VHS3YOR054C RPL11AP0C0W9 174 aaKnown RBP3.54□□□□□ -1.84
VHS3YOR054C AHT1P29589 182 aa3.54□□□□□ -1.84
VHS3YOR054C GPX1P36014 167 aa3.54□□□□□ -1.84
VHS3YOR054C FYV4P38783 130 aaPredicted RBP3.54□□□□□ -1.84
VHS3YOR054C ELO1P39540 310 aa3.54□□□□□ -1.84
VHS3YOR054C ECM18Q04623 453 aa3.54□□□□□ -1.84
VHS3YOR054C PRP11Q07350 266 aaPredicted RBP3.54□□□□□ -1.84
VHS3YOR054C GRE1Q08969 168 aa3.54□□□□□ -1.84
VHS3YOR054C RPL11BQ3E757 174 aaPredicted RBP3.54□□□□□ -1.84
VHS3YOR054C PRE2P30656 287 aaKnown RBP3.54□□□□□ -1.84
VHS3YOR054C ECM15P35195 104 aa3.54□□□□□ -1.84
VHS3YOR054C SWD2P36104 329 aaPredicted RBP3.54□□□□□ -1.84
VHS3YOR054C MOH1P38191 138 aa3.54□□□□□ -1.84
VHS3YOR054C ECM34P38728 170 aa3.54□□□□□ -1.84
VHS3YOR054C YHL026CP38740 315 aa3.54□□□□□ -1.84
VHS3YOR054C AZF1P41696 914 aa3.54□□□□□ -1.84
VHS3YOR054C BUD8P41698 603 aa3.54□□□□□ -1.84
VHS3YOR054C YFL054CP43549 646 aa3.54□□□□□ -1.84
VHS3YOR054C SCW4P53334 386 aaKnown RBP3.54□□□□□ -1.84
VHS3YOR054C CUZ1P53899 274 aa3.54□□□□□ -1.84
VHS3YOR054C YMR206WQ03695 313 aa3.54□□□□□ -1.84
VHS3YOR054C SDH7Q04401 133 aa3.54□□□□□ -1.84
VHS3YOR054C GRH1Q04410 372 aaKnown RBP3.54□□□□□ -1.84
VHS3YOR054C DPP1Q05521 289 aa3.54□□□□□ -1.84
VHS3YOR054C YKR104WP0CE69 306 aa3.53□□□□□ -1.84
VHS3YOR054C MCK1P21965 375 aaKnown RBP3.53□□□□□ -1.84
VHS3YOR054C REC104P33323 182 aa3.53□□□□□ -1.84
VHS3YOR054C SHB17P36136 271 aaKnown RBP3.53□□□□□ -1.84
VHS3YOR054C CRZ1P53968 678 aa3.53□□□□□ -1.84
VHS3YOR054C SUR7P54003 302 aa3.53□□□□□ -1.84
VHS3YOR054C LEE1Q02799 301 aaKnown RBP3.53□□□□□ -1.84
VHS3YOR054C YML079WQ03629 201 aa3.53□□□□□ -1.84
VHS3YOR054C YMR210WQ03649 449 aa3.53□□□□□ -1.84
VHS3YOR054C YMR310CQ04867 317 aaPredicted RBP3.53□□□□□ -1.84
VHS3YOR054C YOR105WQ08504 108 aa3.53□□□□□ -1.84
VHS3YOR054C NPC2Q12408 173 aa3.53□□□□□ -1.84
VHS3YOR054C UBA3Q99344 299 aa3.53□□□□□ -1.84
VHS3YOR054C RPL7AP05737 244 aaKnown RBP3.53□□□□□ -1.84
VHS3YOR054C RPS21AP0C0V8 87 aaKnown RBP3.53□□□□□ -1.84
VHS3YOR054C COX10P21592 462 aa3.53□□□□□ -1.84
VHS3YOR054C ARO4P32449 370 aaKnown RBP3.53□□□□□ -1.84
VHS3YOR054C YKL071WP36086 256 aa3.53□□□□□ -1.84
VHS3YOR054C PAM17P36147 197 aa3.53□□□□□ -1.84
VHS3YOR054C ATX1P38636 73 aa3.53□□□□□ -1.84
VHS3YOR054C XBP1P40489 647 aa3.53□□□□□ -1.84
VHS3YOR054C UBC9P50623 157 aaPredicted RBP3.53□□□□□ -1.84
VHS3YOR054C YGR045CP53229 120 aa3.53□□□□□ -1.84
VHS3YOR054C YLR460CP54007 376 aa3.53□□□□□ -1.84
VHS3YOR054C YMR090WQ04304 227 aaKnown RBP3.53□□□□□ -1.84
VHS3YOR054C RIM9Q04734 239 aa3.53□□□□□ -1.84
VHS3YOR054C ARC18Q05933 178 aaKnown RBP3.53□□□□□ -1.84
VHS3YOR054C RPS21BQ3E754 87 aaKnown RBP3.53□□□□□ -1.84
VHS3YOR054C FCY2P17064 533 aa3.52□□□□□ -1.85
VHS3YOR054C MDH2P22133 377 aa3.52□□□□□ -1.85
VHS3YOR054C PDE1P22434 369 aa3.52□□□□□ -1.85
VHS3YOR054C PCL1P24867 279 aa3.52□□□□□ -1.85
VHS3YOR054C SGE1P33335 543 aa3.52□□□□□ -1.85
VHS3YOR054C YOR062CP36025 268 aa3.52□□□□□ -1.85
VHS3YOR054C PCL5P38794 229 aa3.52□□□□□ -1.85
VHS3YOR054C TIM17P39515 158 aa3.52□□□□□ -1.85
VHS3YOR054C OXA1P39952 402 aa3.52□□□□□ -1.85
VHS3YOR054C CDH1P53197 566 aa3.52□□□□□ -1.85
VHS3YOR054C YPR098CQ06089 161 aa3.52□□□□□ -1.85
VHS3YOR054C SNT309Q06091 175 aaPredicted RBP3.52□□□□□ -1.85
VHS3YOR054C SWT1Q12104 458 aa3.52□□□□□ -1.85
VHS3YOR054C ACC1Q00955 2233 aaKnown RBP3.52□□□□□ -1.85
VHS3YOR054C GAL7P08431 366 aa3.51□□□□□ -1.85
VHS3YOR054C CBS1P14066 229 aa3.51□□□□□ -1.85
VHS3YOR054C GAR1P28007 205 aaKnown RBP3.51□□□□□ -1.85
VHS3YOR054C YKL097CP34245 136 aa3.51□□□□□ -1.85
VHS3YOR054C MRPL24P36525 258 aaPredicted RBP3.51□□□□□ -1.85
VHS3YOR054C ECM14P38836 430 aa3.51□□□□□ -1.85
VHS3YOR054C OSW5P40219 148 aa3.51□□□□□ -1.85
VHS3YOR054C GPI2P46961 280 aa3.51□□□□□ -1.85
VHS3YOR054C OST2P46964 130 aa3.51□□□□□ -1.85
VHS3YOR054C BNA2P47125 453 aa3.51□□□□□ -1.85
VHS3YOR054C SBH2P52871 88 aa3.51□□□□□ -1.85
VHS3YOR054C MSO1P53604 210 aaKnown RBP3.51□□□□□ -1.85
VHS3YOR054C YLR152CP54072 576 aa3.51□□□□□ -1.85
VHS3YOR054C LPP1Q04396 274 aa3.51□□□□□ -1.85
VHS3YOR054C DIC1Q06143 298 aa3.51□□□□□ -1.85
VHS3YOR054C YDL211CQ12121 372 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms