RNA–Protein interactions for RNA: YMR076C

PDS5, Transcript of Cohesion maintenance factor, yeastyeast

Gene PDS5, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDS5YMR076C YPL073CP40323 161 aa1.75□□□□□ -2.13
PDS5YMR076C GLR1P41921 483 aaKnown RBP1.75□□□□□ -2.13
PDS5YMR076C LSM1P47017 172 aaKnown RBP1.75□□□□□ -2.13
PDS5YMR076C HHT1P61830 136 aa1.75□□□□□ -2.13
PDS5YMR076C TMA20P89886 181 aaPredicted RBP1.75□□□□□ -2.13
PDS5YMR076C FYV4P38783 130 aaPredicted RBP1.74□□□□□ -2.13
PDS5YMR076C TDA4P47153 279 aa1.74□□□□□ -2.13
PDS5YMR076C TTI2P47168 421 aa1.74□□□□□ -2.13
PDS5YMR076C DOC1P53068 250 aa1.74□□□□□ -2.13
PDS5YMR076C YLR236CA0A023PZG4 107 aa1.74□□□□□ -2.13
PDS5YMR076C RAD28Q12021 506 aa1.74□□□□□ -2.13
PDS5YMR076C RIO2P40160 425 aaKnown RBP1.74□□□□□ -2.13
PDS5YMR076C ODC2Q99297 307 aa1.74□□□□□ -2.13
PDS5YMR076C YNL033WP53964 284 aa1.73□□□□□ -2.13
PDS5YMR076C YDL180WQ12301 547 aa1.73□□□□□ -2.13
PDS5YMR076C SCL1P21243 252 aaKnown RBP1.73□□□□□ -2.13
PDS5YMR076C YER135CP40082 130 aa1.73□□□□□ -2.13
PDS5YMR076C TRM3Q07527 1436 aa1.73□□□□□ -2.13
PDS5YMR076C CYC2P38909 366 aa1.73□□□□□ -2.13
PDS5YMR076C FIP1P45976 327 aa1.73□□□□□ -2.13
PDS5YMR076C ACP1P32463 125 aa1.72□□□□□ -2.13
PDS5YMR076C TIM13P53299 105 aa1.72□□□□□ -2.13
PDS5YMR076C UTR5P32630 166 aa1.72□□□□□ -2.13
PDS5YMR076C YGR201CP42936 225 aa1.72□□□□□ -2.13
PDS5YMR076C PIR1Q03178 341 aa1.72□□□□□ -2.13
PDS5YMR076C SPT14P32363 452 aa1.72□□□□□ -2.13
PDS5YMR076C GIM4P40005 111 aaKnown RBP1.72□□□□□ -2.13
PDS5YMR076C YFR054CP43622 192 aa1.72□□□□□ -2.13
PDS5YMR076C YKR005CQ02203 525 aa1.72□□□□□ -2.13
PDS5YMR076C RSM25P40496 264 aa1.71□□□□□ -2.14
PDS5YMR076C YJL218WP40892 196 aaKnown RBP1.71□□□□□ -2.14
PDS5YMR076C ATG40Q99325 256 aa1.71□□□□□ -2.14
PDS5YMR076C YEL028WP39989 153 aa1.71□□□□□ -2.14
PDS5YMR076C ERG25P53045 309 aa1.71□□□□□ -2.14
PDS5YMR076C RAD6P06104 172 aa1.71□□□□□ -2.14
PDS5YMR076C UPS2P35200 230 aa1.71□□□□□ -2.14
PDS5YMR076C SPO73P40031 143 aa1.71□□□□□ -2.14
PDS5YMR076C CCC1P47818 322 aa1.71□□□□□ -2.14
PDS5YMR076C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
PDS5YMR076C ATP20Q12233 115 aa1.71□□□□□ -2.14
PDS5YMR076C IDP1P21954 428 aaKnown RBP1.7□□□□□ -2.14
PDS5YMR076C UBC8P28263 218 aa1.7□□□□□ -2.14
PDS5YMR076C IPI1P38803 334 aaPredicted RBP1.7□□□□□ -2.14
PDS5YMR076C GAA1P39012 614 aa1.7□□□□□ -2.14
PDS5YMR076C YGL204CP53089 101 aa1.7□□□□□ -2.14
PDS5YMR076C RAV2Q03956 351 aa1.7□□□□□ -2.14
PDS5YMR076C SHH3Q04487 196 aa1.7□□□□□ -2.14
PDS5YMR076C YPR013CQ12145 317 aa1.7□□□□□ -2.14
PDS5YMR076C PBI2P0CT04 75 aaKnown RBP1.7□□□□□ -2.14
PDS5YMR076C HSP30P25619 332 aa1.7□□□□□ -2.14
PDS5YMR076C YEL067CP39978 195 aa1.7□□□□□ -2.14
PDS5YMR076C KNH1P50112 268 aa1.7□□□□□ -2.14
PDS5YMR076C FIT2Q08906 153 aa1.7□□□□□ -2.14
PDS5YMR076C YOR214CQ12282 236 aa1.7□□□□□ -2.14
PDS5YMR076C APQ12P40532 138 aa1.7□□□□□ -2.14
PDS5YMR076C SPC2Q04969 178 aa1.7□□□□□ -2.14
PDS5YMR076C CLB6P32943 380 aa1.69□□□□□ -2.14
PDS5YMR076C YKR045CP36138 183 aa1.69□□□□□ -2.14
PDS5YMR076C RRT1P38192 103 aa1.69□□□□□ -2.14
PDS5YMR076C FSF1Q12029 327 aaKnown RBP1.69□□□□□ -2.14
PDS5YMR076C ATP5P09457 212 aa1.69□□□□□ -2.14
PDS5YMR076C SML1Q04964 104 aa1.69□□□□□ -2.14
PDS5YMR076C PST2Q12335 198 aaKnown RBP1.69□□□□□ -2.14
PDS5YMR076C EMC6Q12431 108 aa1.69□□□□□ -2.14
PDS5YMR076C VMA22P38784 181 aa1.69□□□□□ -2.14
PDS5YMR076C HTD2P38790 280 aaKnown RBP1.69□□□□□ -2.14
PDS5YMR076C NSA2P40078 261 aaKnown RBP1.69□□□□□ -2.14
PDS5YMR076C EFG1Q3E705 233 aaKnown RBP1.69□□□□□ -2.14
PDS5YMR076C YLR412C-AQ3E742 68 aa1.69□□□□□ -2.14
PDS5YMR076C HRD1Q08109 551 aa1.68□□□□□ -2.14
PDS5YMR076C COX8P04039 78 aa1.67□□□□□ -2.14
PDS5YMR076C SAY1P53324 424 aa1.67□□□□□ -2.14
PDS5YMR076C RNH202Q05635 350 aa1.66□□□□□ -2.14
PDS5YMR076C SYM1Q06563 197 aa1.66□□□□□ -2.14
PDS5YMR076C PKR1Q03880 122 aaKnown RBP1.66□□□□□ -2.14
PDS5YMR076C YGR042WP53227 271 aa1.66□□□□□ -2.14
PDS5YMR076C UPS3Q04006 179 aa1.66□□□□□ -2.14
PDS5YMR076C CUE4Q04201 117 aaPredicted RBP1.66□□□□□ -2.14
PDS5YMR076C DDI2P0CH63 225 aa1.65□□□□□ -2.14
PDS5YMR076C DDI3P0CH64 225 aa1.65□□□□□ -2.14
PDS5YMR076C GSP2P32836 220 aaKnown RBP1.65□□□□□ -2.14
PDS5YMR076C HSL1P34244 1518 aa1.65□□□□□ -2.14
PDS5YMR076C YBR219CP38317 127 aa1.65□□□□□ -2.15
PDS5YMR076C LIP1Q03579 150 aa1.65□□□□□ -2.15
PDS5YMR076C PRP11Q07350 266 aaPredicted RBP1.65□□□□□ -2.15
PDS5YMR076C NRG2P38082 220 aa1.65□□□□□ -2.15
PDS5YMR076C YHL018WP38744 120 aaPredicted RBP1.65□□□□□ -2.15
PDS5YMR076C RFU1Q08003 200 aa1.65□□□□□ -2.15
PDS5YMR076C TAF2P23255 1407 aa1.64□□□□□ -2.15
PDS5YMR076C YDR391CQ04170 232 aa1.64□□□□□ -2.15
PDS5YMR076C YMR320WQ04897 101 aa1.64□□□□□ -2.15
PDS5YMR076C YPR174CQ06616 221 aaPredicted RBP1.64□□□□□ -2.15
PDS5YMR076C SEC11P15367 167 aa1.64□□□□□ -2.15
PDS5YMR076C POP7P38291 140 aa1.64□□□□□ -2.15
PDS5YMR076C YBR209WP38311 105 aa1.64□□□□□ -2.15
PDS5YMR076C YNL200CP40165 246 aaKnown RBP1.64□□□□□ -2.15
PDS5YMR076C EST3Q03096 181 aa1.64□□□□□ -2.15
PDS5YMR076C YLR361C-AQ3E795 98 aa1.64□□□□□ -2.15
PDS5YMR076C QCR8P08525 94 aa1.64□□□□□ -2.15
PDS5YMR076C DLS1P40366 167 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms