RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C RPL35AP0CX84 120 aaKnown RBP2.47□□□□□ -2.01
USB1YLR132C RPL35BP0CX85 120 aaKnown RBP2.47□□□□□ -2.01
USB1YLR132C NHP6BP11633 99 aaKnown RBP2.47□□□□□ -2.01
USB1YLR132C FCY2P17064 533 aa2.47□□□□□ -2.01
USB1YLR132C SEC17P32602 292 aa2.47□□□□□ -2.01
USB1YLR132C CAF4P36130 643 aa2.47□□□□□ -2.01
USB1YLR132C RIB1P38066 345 aa2.47□□□□□ -2.01
USB1YLR132C ADO1P47143 340 aaKnown RBP2.47□□□□□ -2.01
USB1YLR132C CAB4P53332 305 aa2.47□□□□□ -2.01
USB1YLR132C RCF2P53721 224 aa2.47□□□□□ -2.01
USB1YLR132C FYV6P53913 173 aa2.47□□□□□ -2.01
USB1YLR132C RIM9Q04734 239 aa2.47□□□□□ -2.01
USB1YLR132C MCP1Q12106 302 aa2.47□□□□□ -2.01
USB1YLR132C MHF1Q3E835 90 aa2.47□□□□□ -2.01
USB1YLR132C RPL9AP05738 191 aaKnown RBP2.46□□□□□ -2.02
USB1YLR132C YHR032W-AP0C5N6 59 aa2.46□□□□□ -2.02
USB1YLR132C YHR180WP38868 163 aa2.46□□□□□ -2.02
USB1YLR132C YER121WP40076 114 aa2.46□□□□□ -2.02
USB1YLR132C OTU1P43558 301 aa2.46□□□□□ -2.02
USB1YLR132C YJR056CP47115 236 aa2.46□□□□□ -2.02
USB1YLR132C PAC10P48363 199 aa2.46□□□□□ -2.02
USB1YLR132C RPL9BP51401 191 aaKnown RBP2.46□□□□□ -2.02
USB1YLR132C NOP19P53317 196 aaPredicted RBP2.46□□□□□ -2.02
USB1YLR132C CSI2Q08054 341 aa2.46□□□□□ -2.02
USB1YLR132C YLR053CQ12026 108 aa2.46□□□□□ -2.02
USB1YLR132C RAS2P01120 322 aaKnown RBP2.45□□□□□ -2.02
USB1YLR132C YMR31P19955 123 aa2.45□□□□□ -2.02
USB1YLR132C NTF2P33331 125 aaKnown RBP2.45□□□□□ -2.02
USB1YLR132C MIC12P38341 106 aa2.45□□□□□ -2.02
USB1YLR132C RPF1P38805 295 aaKnown RBP2.45□□□□□ -2.02
USB1YLR132C GLR1P41921 483 aaKnown RBP2.45□□□□□ -2.02
USB1YLR132C MIC26P50087 233 aa2.45□□□□□ -2.02
USB1YLR132C YDR476CQ03362 224 aa2.45□□□□□ -2.02
USB1YLR132C IRC19Q07843 230 aa2.45□□□□□ -2.02
USB1YLR132C NIP7Q08962 181 aaKnown RBP2.45□□□□□ -2.02
USB1YLR132C YOR214CQ12282 236 aa2.45□□□□□ -2.02
USB1YLR132C JLP1Q12358 412 aa2.45□□□□□ -2.02
USB1YLR132C LSO2Q3E772 92 aaKnown RBP2.45□□□□□ -2.02
USB1YLR132C YBR121C-AP0C5L4 52 aa2.44□□□□□ -2.02
USB1YLR132C MDH3P32419 343 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
USB1YLR132C YBR063CP38083 404 aa2.44□□□□□ -2.02
USB1YLR132C SMX2P40204 77 aaKnown RBP2.44□□□□□ -2.02
USB1YLR132C MSS2P40990 351 aa2.44□□□□□ -2.02
USB1YLR132C FMN1Q03778 218 aa2.44□□□□□ -2.02
USB1YLR132C RPL28P02406 149 aaKnown RBP2.43□□□□□ -2.02
USB1YLR132C URA6P15700 204 aa2.43□□□□□ -2.02
USB1YLR132C NTG1P31378 399 aa2.43□□□□□ -2.02
USB1YLR132C BRX1Q08235 291 aaKnown RBP2.43□□□□□ -2.02
USB1YLR132C YOL131WQ08270 108 aa2.43□□□□□ -2.02
USB1YLR132C FIT3Q08907 204 aa2.43□□□□□ -2.02
USB1YLR132C UIP4Q08926 304 aa2.43□□□□□ -2.02
USB1YLR132C ATO3Q12359 275 aa2.43□□□□□ -2.02
USB1YLR132C YKL018C-AQ3E7A7 99 aa2.43□□□□□ -2.02
USB1YLR132C YGR035W-AQ45U48 73 aa2.43□□□□□ -2.02
USB1YLR132C CDC8P00572 216 aa2.42□□□□□ -2.02
USB1YLR132C STE18P18852 110 aa2.42□□□□□ -2.02
USB1YLR132C APA2P22108 325 aa2.42□□□□□ -2.02
USB1YLR132C PEX17P40155 199 aa2.42□□□□□ -2.02
USB1YLR132C AGE2P40529 298 aa2.42□□□□□ -2.02
USB1YLR132C ERV29P53337 310 aa2.42□□□□□ -2.02
USB1YLR132C YNL010WP53981 241 aaKnown RBP2.42□□□□□ -2.02
USB1YLR132C YOR343CQ12484 108 aa2.42□□□□□ -2.02
USB1YLR132C YCL048W-AQ2V2Q2 79 aa2.42□□□□□ -2.02
USB1YLR132C YHR214C-EQ8TGK0 99 aa2.42□□□□□ -2.02
USB1YLR132C MSW1P04803 379 aa2.41□□□□□ -2.02
USB1YLR132C HSP30P25619 332 aa2.41□□□□□ -2.02
USB1YLR132C LHP1P33399 275 aaKnown RBP2.41□□□□□ -2.02
USB1YLR132C PTC1P35182 281 aa2.41□□□□□ -2.02
USB1YLR132C CLG1P35190 452 aa2.41□□□□□ -2.02
USB1YLR132C FIG1P38224 298 aa2.41□□□□□ -2.02
USB1YLR132C BRR6P53062 197 aa2.41□□□□□ -2.02
USB1YLR132C YGR219WP53307 113 aa2.41□□□□□ -2.02
USB1YLR132C DID2P69771 204 aa2.41□□□□□ -2.02
USB1YLR132C DAD3P69850 94 aa2.41□□□□□ -2.02
USB1YLR132C PET191Q02772 108 aa2.41□□□□□ -2.02
USB1YLR132C VPS71Q03433 280 aa2.41□□□□□ -2.02
USB1YLR132C MER1P16523 270 aa2.4□□□□□ -2.03
USB1YLR132C RPS1BP23248 255 aaKnown RBP2.4□□□□□ -2.03
USB1YLR132C DOA4P32571 926 aa2.4□□□□□ -2.03
USB1YLR132C NRG2P38082 220 aa2.4□□□□□ -2.03
USB1YLR132C DOG2P38773 246 aa2.4□□□□□ -2.03
USB1YLR132C DOG1P38774 246 aa2.4□□□□□ -2.03
USB1YLR132C RPA43P46669 326 aa2.4□□□□□ -2.03
USB1YLR132C DAN1P47178 298 aa2.4□□□□□ -2.03
USB1YLR132C NUP57P48837 541 aa2.4□□□□□ -2.03
USB1YLR132C YDR102CQ03864 110 aa2.4□□□□□ -2.03
USB1YLR132C BNA7Q04066 261 aa2.4□□□□□ -2.03
USB1YLR132C DCN1Q12395 269 aa2.4□□□□□ -2.03
USB1YLR132C YPK2P18961 677 aa2.39□□□□□ -2.03
USB1YLR132C TIM12P32830 109 aa2.39□□□□□ -2.03
USB1YLR132C MRPL17P36528 281 aa2.39□□□□□ -2.03
USB1YLR132C ECM33P38248 429 aaKnown RBP2.39□□□□□ -2.03
USB1YLR132C CTR2P38865 189 aa2.39□□□□□ -2.03
USB1YLR132C RGI1P40043 161 aaPredicted RBP2.39□□□□□ -2.03
USB1YLR132C BXI1P48558 297 aa2.39□□□□□ -2.03
USB1YLR132C YNR064CP53750 290 aa2.39□□□□□ -2.03
USB1YLR132C CUS2P53830 285 aaPredicted RBP2.39□□□□□ -2.03
USB1YLR132C TIM11P81449 96 aaPredicted RBP2.39□□□□□ -2.03
USB1YLR132C PRP11Q07350 266 aaPredicted RBP2.39□□□□□ -2.03
USB1YLR132C TIM9O74700 87 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms