RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C UBP8P50102 471 aa3.43□□□□□ -1.86
SPT23YKL020C TEX1P53851 422 aaKnown RBP3.43□□□□□ -1.86
SPT23YKL020C DUG3P53871 357 aa3.43□□□□□ -1.86
SPT23YKL020C YMR082CQ04276 118 aa3.43□□□□□ -1.86
SPT23YKL020C FCF1Q05498 189 aaPredicted RBP3.43□□□□□ -1.86
SPT23YKL020C COQ11Q05892 277 aa3.43□□□□□ -1.86
SPT23YKL020C IZH2Q12442 317 aa3.43□□□□□ -1.86
SPT23YKL020C KTI11Q3E840 82 aa3.43□□□□□ -1.86
SPT23YKL020C NNK1P36003 928 aa3.43□□□□□ -1.86
SPT23YKL020C LYS1P38998 373 aaRIP-Chip data3.43□□□□□ -1.86not detected
SPT23YKL020C HMF1P40037 129 aaKnown RBP3.43□□□□□ -1.86
SPT23YKL020C YIL165CP40446 119 aa3.43□□□□□ -1.86
SPT23YKL020C YIL059CP40520 121 aa3.43□□□□□ -1.86
SPT23YKL020C SNO3P43544 222 aa3.43□□□□□ -1.86
SPT23YKL020C SNO2P53823 222 aa3.43□□□□□ -1.86
SPT23YKL020C ADD37Q03233 198 aa3.43□□□□□ -1.86
SPT23YKL020C YPL264CQ08980 353 aa3.43□□□□□ -1.86
SPT23YKL020C ERV2Q12284 196 aa3.43□□□□□ -1.86
SPT23YKL020C MSI1P13712 422 aa3.42□□□□□ -1.86
SPT23YKL020C YMC1P32331 307 aa3.42□□□□□ -1.86
SPT23YKL020C ISF1P32488 338 aa3.42□□□□□ -1.86
SPT23YKL020C PAU16P35994 123 aa3.42□□□□□ -1.86
SPT23YKL020C YNL198CP40166 100 aa3.42□□□□□ -1.86
SPT23YKL020C BET5Q03630 159 aa3.42□□□□□ -1.86
SPT23YKL020C UPS1Q05776 175 aa3.42□□□□□ -1.86
SPT23YKL020C YPR174CQ06616 221 aaPredicted RBP3.42□□□□□ -1.86
SPT23YKL020C RRT7Q07829 113 aa3.42□□□□□ -1.86
SPT23YKL020C COX17Q12287 69 aa3.42□□□□□ -1.86
SPT23YKL020C PEX11Q12462 236 aa3.42□□□□□ -1.86
SPT23YKL020C YLR412C-AQ3E742 68 aa3.42□□□□□ -1.86
SPT23YKL020C RAD6P06104 172 aa3.42□□□□□ -1.86
SPT23YKL020C CPA1P07258 411 aaKnown RBP3.42□□□□□ -1.86
SPT23YKL020C RPL18AP0CX49 186 aaKnown RBP3.42□□□□□ -1.86
SPT23YKL020C RPL18BP0CX50 186 aaKnown RBP3.42□□□□□ -1.86
SPT23YKL020C PRO1P32264 428 aa3.42□□□□□ -1.86
SPT23YKL020C NUD1P32336 851 aa3.42□□□□□ -1.86
SPT23YKL020C CMC1P36064 111 aa3.42□□□□□ -1.86
SPT23YKL020C ELO1P39540 310 aa3.42□□□□□ -1.86
SPT23YKL020C SGN1P40561 250 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SPT23YKL020C UBX6P47049 396 aa3.42□□□□□ -1.86
SPT23YKL020C VEL1P53058 206 aa3.42□□□□□ -1.86
SPT23YKL020C NRG1Q03125 231 aa3.42□□□□□ -1.86
SPT23YKL020C YMR166CQ03829 368 aa3.42□□□□□ -1.86
SPT23YKL020C FCY1Q12178 158 aa3.42□□□□□ -1.86
SPT23YKL020C RPL7BQ12213 244 aaKnown RBP3.42□□□□□ -1.86
SPT23YKL020C SPO24Q3E752 67 aa3.42□□□□□ -1.86
SPT23YKL020C CDC43P18898 376 aa3.42□□□□□ -1.86
SPT23YKL020C RPB10P22139 70 aa3.42□□□□□ -1.86
SPT23YKL020C UMP1P38293 148 aa3.42□□□□□ -1.86
SPT23YKL020C COF1Q03048 143 aaKnown RBP3.42□□□□□ -1.86
SPT23YKL020C PCL9Q12477 304 aa3.42□□□□□ -1.86
SPT23YKL020C BOL1Q3E793 110 aa3.42□□□□□ -1.86
SPT23YKL020C ADH1P00330 348 aaKnown RBP3.41□□□□□ -1.86
SPT23YKL020C PRE2P30656 287 aaKnown RBP3.41□□□□□ -1.86
SPT23YKL020C ERG24P32462 438 aaKnown RBP3.41□□□□□ -1.86
SPT23YKL020C TEM1P38987 245 aa3.41□□□□□ -1.86
SPT23YKL020C YEL028WP39989 153 aa3.41□□□□□ -1.86
SPT23YKL020C XBP1P40489 647 aa3.41□□□□□ -1.86
SPT23YKL020C SDC1Q03323 175 aa3.41□□□□□ -1.86
SPT23YKL020C YDR344CQ05510 147 aa3.41□□□□□ -1.86
SPT23YKL020C PBI2P0CT04 75 aaKnown RBP3.41□□□□□ -1.86
SPT23YKL020C MRPL20P22354 195 aaPredicted RBP3.41□□□□□ -1.86
SPT23YKL020C ERG8P24521 451 aa3.41□□□□□ -1.86
SPT23YKL020C FMP46P36141 133 aaKnown RBP3.41□□□□□ -1.86
SPT23YKL020C MRPL27P36526 146 aaPredicted RBP3.41□□□□□ -1.86
SPT23YKL020C TIS11P47977 285 aa3.41□□□□□ -1.86
SPT23YKL020C ICT1Q12385 394 aa3.41□□□□□ -1.86
SPT23YKL020C RPS21BQ3E754 87 aaKnown RBP3.41□□□□□ -1.86
SPT23YKL020C YBL112CQ3E7Y4 105 aa3.41□□□□□ -1.86
SPT23YKL020C POR1P04840 283 aaKnown RBP3.4□□□□□ -1.86
SPT23YKL020C HSP10P38910 106 aa3.4□□□□□ -1.86
SPT23YKL020C OST2P46964 130 aa3.4□□□□□ -1.86
SPT23YKL020C TTI2P47168 421 aa3.4□□□□□ -1.86
SPT23YKL020C YGR219WP53307 113 aa3.4□□□□□ -1.86
SPT23YKL020C MRX11Q03079 207 aa3.4□□□□□ -1.86
SPT23YKL020C IES4Q08561 116 aa3.4□□□□□ -1.86
SPT23YKL020C OPI3P05375 206 aa3.4□□□□□ -1.87
SPT23YKL020C VMA11P32842 164 aa3.4□□□□□ -1.87
SPT23YKL020C SCW4P53334 386 aaKnown RBP3.4□□□□□ -1.87
SPT23YKL020C PDR17P53844 350 aa3.4□□□□□ -1.87
SPT23YKL020C YMR310CQ04867 317 aaPredicted RBP3.4□□□□□ -1.87
SPT23YKL020C ARC18Q05933 178 aaKnown RBP3.4□□□□□ -1.87
SPT23YKL020C COX9P07255 59 aa3.4□□□□□ -1.87
SPT23YKL020C CHO1P08456 276 aa3.4□□□□□ -1.87
SPT23YKL020C YCR100CP25606 316 aa3.4□□□□□ -1.87
SPT23YKL020C YFR045WP43617 309 aa3.4□□□□□ -1.87
SPT23YKL020C YJL028WP47062 111 aa3.4□□□□□ -1.87
SPT23YKL020C SLG1P54867 378 aa3.4□□□□□ -1.87
SPT23YKL020C HSK3P69852 69 aa3.4□□□□□ -1.87
SPT23YKL020C TRI1Q05024 226 aa3.4□□□□□ -1.87
SPT23YKL020C NDD1Q08887 554 aa3.4□□□□□ -1.87
SPT23YKL020C YLR146W-AQ2V2P1 62 aa3.4□□□□□ -1.87
SPT23YKL020C YKL107WP34251 309 aa3.39□□□□□ -1.87
SPT23YKL020C GON7P46984 123 aa3.39□□□□□ -1.87
SPT23YKL020C EMC4P53073 190 aa3.39□□□□□ -1.87
SPT23YKL020C GEP7P53171 287 aa3.39□□□□□ -1.87
SPT23YKL020C NMA1Q06178 401 aaKnown RBP3.39□□□□□ -1.87
SPT23YKL020C NAT3Q06504 195 aa3.39□□□□□ -1.87
SPT23YKL020C ARR3Q06598 404 aa3.39□□□□□ -1.87
SPT23YKL020C STP4Q07351 490 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms