RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W AIF1P52923 378 aa2.82□□□□□ -1.96
UBP12YJL197W CGI121Q03705 181 aaKnown RBP2.82□□□□□ -1.96
UBP12YJL197W NEJ1Q06148 342 aa2.82□□□□□ -1.96
UBP12YJL197W PRP11Q07350 266 aaPredicted RBP2.82□□□□□ -1.96
UBP12YJL197W CDC25P04821 1589 aa2.82□□□□□ -1.96
UBP12YJL197W PTC1P35182 281 aa2.81□□□□□ -1.96
UBP12YJL197W UMP1P38293 148 aa2.81□□□□□ -1.96
UBP12YJL197W MRPS8Q03799 155 aa2.81□□□□□ -1.96
UBP12YJL197W YOR268CQ08734 132 aa2.81□□□□□ -1.96
UBP12YJL197W YOR304C-AO14468 76 aa2.81□□□□□ -1.96
UBP12YJL197W RPS20P38701 121 aaKnown RBP2.81□□□□□ -1.96
UBP12YJL197W GON7P46984 123 aa2.81□□□□□ -1.96
UBP12YJL197W PHO85P17157 305 aa2.81□□□□□ -1.96
UBP12YJL197W CTR2P38865 189 aa2.81□□□□□ -1.96
UBP12YJL197W YPR063CQ12160 140 aa2.81□□□□□ -1.96
UBP12YJL197W SNC2P33328 115 aa2.8□□□□□ -1.96
UBP12YJL197W MRPL24P36525 258 aaPredicted RBP2.8□□□□□ -1.96
UBP12YJL197W YML122CQ03207 126 aa2.8□□□□□ -1.96
UBP12YJL197W ATG2P53855 1592 aa2.8□□□□□ -1.96
UBP12YJL197W MRPS9P38120 278 aa2.8□□□□□ -1.96
UBP12YJL197W NSA2P40078 261 aaKnown RBP2.8□□□□□ -1.96
UBP12YJL197W YER137CP40083 148 aaKnown RBP2.8□□□□□ -1.96
UBP12YJL197W ARL3Q02804 198 aa2.8□□□□□ -1.96
UBP12YJL197W TIR1P10863 254 aa2.8□□□□□ -1.96
UBP12YJL197W SMD3P43321 101 aaKnown RBP2.8□□□□□ -1.96
UBP12YJL197W YGR017WP53210 297 aa2.8□□□□□ -1.96
UBP12YJL197W MSW1P04803 379 aa2.79□□□□□ -1.96
UBP12YJL197W APS2Q00381 147 aa2.79□□□□□ -1.96
UBP12YJL197W HAL1Q01766 294 aa2.79□□□□□ -1.96
UBP12YJL197W RSA4P25382 515 aaKnown RBP2.79□□□□□ -1.96
UBP12YJL197W SHB17P36136 271 aaKnown RBP2.79□□□□□ -1.96
UBP12YJL197W YMR099CQ03161 297 aaKnown RBP2.79□□□□□ -1.96
UBP12YJL197W RUB1Q03919 77 aa2.79□□□□□ -1.96
UBP12YJL197W RPS1BP23248 255 aaKnown RBP2.79□□□□□ -1.96
UBP12YJL197W YHL026CP38740 315 aa2.79□□□□□ -1.96
UBP12YJL197W FYV4P38783 130 aaPredicted RBP2.79□□□□□ -1.96
UBP12YJL197W ERJ5P43613 295 aaPredicted RBP2.79□□□□□ -1.96
UBP12YJL197W GPI2P46961 280 aa2.79□□□□□ -1.96
UBP12YJL197W YDR274CP87283 123 aa2.79□□□□□ -1.96
UBP12YJL197W YDR391CQ04170 232 aa2.78□□□□□ -1.96
UBP12YJL197W YKR032WP36127 104 aa2.78□□□□□ -1.96
UBP12YJL197W PGD1P40356 397 aa2.78□□□□□ -1.96
UBP12YJL197W YHR032W-AP0C5N6 59 aa2.78□□□□□ -1.96
UBP12YJL197W SRP21P32342 167 aa2.78□□□□□ -1.96
UBP12YJL197W TFC1P32367 649 aa2.78□□□□□ -1.96
UBP12YJL197W YBR220CP38318 560 aa2.78□□□□□ -1.96
UBP12YJL197W FMP49A0A023PZB3 126 aa2.77□□□□□ -1.97
UBP12YJL197W PCL1P24867 279 aa2.77□□□□□ -1.97
UBP12YJL197W HYM1P32464 399 aa2.77□□□□□ -1.97
UBP12YJL197W MID2P36027 376 aa2.77□□□□□ -1.97
UBP12YJL197W YKR005CQ02203 525 aa2.77□□□□□ -1.97
UBP12YJL197W VPS28Q02767 242 aa2.77□□□□□ -1.97
UBP12YJL197W FCY1Q12178 158 aa2.77□□□□□ -1.97
UBP12YJL197W YOR093CQ12275 1648 aa2.77□□□□□ -1.97
UBP12YJL197W KIN28P06242 306 aa2.77□□□□□ -1.97
UBP12YJL197W NSP1P14907 823 aaKnown RBP2.77□□□□□ -1.97
UBP12YJL197W HPM1P40481 377 aa2.77□□□□□ -1.97
UBP12YJL197W YMR295CQ03559 197 aa2.77□□□□□ -1.97
UBP12YJL197W YTH1Q06102 208 aaPredicted RBP2.77□□□□□ -1.97
UBP12YJL197W FSF1Q12029 327 aaKnown RBP2.77□□□□□ -1.97
UBP12YJL197W CCH1P50077 2039 aa2.77□□□□□ -1.97
UBP12YJL197W PHO13P19881 312 aa2.77□□□□□ -1.97
UBP12YJL197W AYR1P40471 297 aa2.77□□□□□ -1.97
UBP12YJL197W DOC1P53068 250 aa2.77□□□□□ -1.97
UBP12YJL197W YNL033WP53964 284 aa2.77□□□□□ -1.97
UBP12YJL197W YNL019CP53975 284 aa2.77□□□□□ -1.97
UBP12YJL197W POR1P04840 283 aaKnown RBP2.76□□□□□ -1.97
UBP12YJL197W HSP30P25619 332 aa2.76□□□□□ -1.97
UBP12YJL197W UGX2P32772 223 aa2.76□□□□□ -1.97
UBP12YJL197W HTD2P38790 280 aaKnown RBP2.76□□□□□ -1.97
UBP12YJL197W YGR219WP53307 113 aa2.76□□□□□ -1.97
UBP12YJL197W SHH3Q04487 196 aa2.76□□□□□ -1.97
UBP12YJL197W GAL83Q04739 417 aa2.76□□□□□ -1.97
UBP12YJL197W SPC3Q12133 184 aa2.76□□□□□ -1.97
UBP12YJL197W RPO31P04051 1460 aa2.76□□□□□ -1.97
UBP12YJL197W YIL177CP40434 1758 aa2.76□□□□□ -1.97
UBP12YJL197W YJL225CP40889 1758 aa2.76□□□□□ -1.97
UBP12YJL197W SPC25P40014 221 aa2.76□□□□□ -1.97
UBP12YJL197W SYM1Q06563 197 aa2.76□□□□□ -1.97
UBP12YJL197W ATP20Q12233 115 aa2.76□□□□□ -1.97
UBP12YJL197W YIR021W-AQ3E739 70 aa2.76□□□□□ -1.97
UBP12YJL197W RAD6P06104 172 aa2.76□□□□□ -1.97
UBP12YJL197W YRA2P36036 203 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
UBP12YJL197W CUP9P41817 306 aa2.76□□□□□ -1.97
UBP12YJL197W GRX5Q02784 150 aa2.76□□□□□ -1.97
UBP12YJL197W SCM4P32564 187 aa2.75□□□□□ -1.97
UBP12YJL197W TMC1Q08422 150 aaPredicted RBP2.75□□□□□ -1.97
UBP12YJL197W ATO3Q12359 275 aa2.75□□□□□ -1.97
UBP12YJL197W YDR102CQ03864 110 aa2.75□□□□□ -1.97
UBP12YJL197W YLR099W-AQ3E798 87 aa2.75□□□□□ -1.97
UBP12YJL197W YNL277W-AQ3E7Z0 62 aa2.75□□□□□ -1.97
UBP12YJL197W HSP12P22943 109 aaKnown RBP2.75□□□□□ -1.97
UBP12YJL197W SUI1P32911 108 aaKnown RBP2.75□□□□□ -1.97
UBP12YJL197W YHR180WP38868 163 aa2.75□□□□□ -1.97
UBP12YJL197W ALB1P47019 175 aaPredicted RBP2.75□□□□□ -1.97
UBP12YJL197W YGL193CP53097 103 aa2.75□□□□□ -1.97
UBP12YJL197W DNF2Q12675 1612 aa2.75□□□□□ -1.97
UBP12YJL197W TRM3Q07527 1436 aa2.74□□□□□ -1.97
UBP12YJL197W SPT14P32363 452 aa2.74□□□□□ -1.97
UBP12YJL197W RGI1P40043 161 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms