RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeast

Gene RPB4, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB4	YJL140W	APJ1	P53940	528 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	YMR090W	Q04304	227 aa	Known RBP	4.17	□□□□□ -1.74
RPB4	YJL140W	YLR281C	Q05863	155 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	PRP11	Q07350	266 aa	Predicted RBP	4.17	□□□□□ -1.74
RPB4	YJL140W	YOR015W	Q12169	119 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	DGK1	Q12382	290 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	RPL13A	Q12690	199 aa	Predicted RBP	4.17	□□□□□ -1.74
RPB4	YJL140W	YHR213W-A	Q8TGT4	77 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	YCR025C	P25352	136 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	ELO2	P25358	347 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	SRB6	P32570	121 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	SLM6	P38343	150 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	IKI1	P38874	309 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	YEA4	P40004	342 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	SLM1	P40485	686 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	YJR056C	P47115	236 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	YDL186W	P48568	277 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	RPL21A	Q02753	160 aa	Known RBP	4.16	□□□□□ -1.74
RPB4	YJL140W	ADD37	Q03233	198 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	MRPS17	Q03246	237 aa	Predicted RBP	4.16	□□□□□ -1.74
RPB4	YJL140W	YML108W	Q03759	105 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	YMR317W	Q04893	1140 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	RPL21B	Q12672	160 aa	Known RBP	4.16	□□□□□ -1.74
RPB4	YJL140W	COX19	Q3E731	98 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	BOL1	Q3E793	110 aa		4.16	□□□□□ -1.74
RPB4	YJL140W	ROX3	P25046	220 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	LSB5	P25369	354 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	MSK1	P32048	576 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	ECM31	P38122	312 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	GPI18	P38211	433 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	DFG10	P40526	253 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	RPS0B	P46654	252 aa	Known RBP	4.15	□□□□□ -1.75
RPB4	YJL140W	CRH1	P53301	507 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	YCL001W-A	P87012	153 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	SNO1	Q03144	224 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	ECM18	Q04623	453 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	LIP2	Q06005	328 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	YOL029C	Q08187	201 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	YPL264C	Q08980	353 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	PRR2	Q12310	699 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	PCC1	Q3E833	88 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	YMR105W-A	Q8TGS8	64 aa		4.15	□□□□□ -1.75
RPB4	YJL140W	URA5	P13298	226 aa	Known RBP	4.14	□□□□□ -1.75
RPB4	YJL140W	YCR043C	P25361	127 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	LDS1	P31379	325 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	ECM25	P32525	599 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	TCA17	P32613	152 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	ARP3	P47117	449 aa	Known RBP	4.14	□□□□□ -1.75
RPB4	YJL140W	YGR050C	P53231	118 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	LPP1	Q04396	274 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	FSH2	Q05015	223 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	PAM18	Q07914	168 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	SDO1	Q07953	250 aa	Known RBP	4.14	□□□□□ -1.75
RPB4	YJL140W	RAX2	Q12465	1220 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	AGC1	Q12482	902 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	YGR035W-A	Q45U48	73 aa		4.14	□□□□□ -1.75
RPB4	YJL140W	FCY2	P17064	533 aa		4.13	□□□□□ -1.75
RPB4	YJL140W	SPO13	P23624	291 aa		4.13	□□□□□ -1.75
RPB4	YJL140W	IES6	P32617	166 aa		4.13	□□□□□ -1.75
RPB4	YJL140W	UPS2	P35200	230 aa		4.13	□□□□□ -1.75
RPB4	YJL140W	HCH1	P53834	153 aa		4.13	□□□□□ -1.75
RPB4	YJL140W	PDR17	P53844	350 aa		4.13	□□□□□ -1.75
RPB4	YJL140W	DYN2	Q02647	92 aa		4.13	□□□□□ -1.75
RPB4	YJL140W	HRD1	Q08109	551 aa		4.13	□□□□□ -1.75
RPB4	YJL140W	YDL009C	Q12210	107 aa		4.13	□□□□□ -1.75
RPB4	YJL140W	POC4	Q12245	148 aa	Predicted RBP	4.13	□□□□□ -1.75
RPB4	YJL140W	RPL9A	P05738	191 aa	Known RBP	4.12	□□□□□ -1.75
RPB4	YJL140W	YFL068W	P0CX99	160 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	YLL066W-A	P0CY00	160 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	YLL067W-A	P0CY01	160 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	MRP2	P10663	115 aa	Predicted RBP	4.12	□□□□□ -1.75
RPB4	YJL140W	YMR31	P19955	123 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	CDC50	P25656	391 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	AHT1	P29589	182 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	CPR5	P35176	225 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	SPC25	P40014	221 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	YGR269W	P40326	108 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	HAM1	P47119	197 aa	Known RBP	4.12	□□□□□ -1.75
RPB4	YJL140W	TTI2	P47168	421 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	YNR066C	P53752	436 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	TMA23	Q03525	211 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	YMR253C	Q04835	414 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	ADH6	Q04894	360 aa	Known RBP	4.12	□□□□□ -1.75
RPB4	YJL140W	YPR145C-A	Q2V2P0	78 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	YOS1	Q3E834	85 aa		4.12	□□□□□ -1.75
RPB4	YJL140W	TDH1	P00360	332 aa	Known RBP	4.11	□□□□□ -1.75
RPB4	YJL140W	ATP10	P18496	279 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	YNK1	P36010	153 aa	Known RBP	4.11	□□□□□ -1.75
RPB4	YJL140W	PRY2	P36110	329 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	RIB5	P38145	238 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	SHG1	P38337	142 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	YBR292C	P38357	123 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	WSS1	P38838	269 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	YHR138C	P38841	114 aa	Predicted RBP	4.11	□□□□□ -1.75
RPB4	YJL140W	COX15	P40086	486 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	ERG25	P53045	309 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	CAF40	P53829	373 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	DCS1	Q06151	350 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	POS5	Q06892	414 aa		4.11	□□□□□ -1.75
RPB4	YJL140W	YPD1	Q07688	167 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms