RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W SYF2P53277 215 aaPredicted RBP1.61□□□□□ -2.15
RTT107YHR154W SCW4P53334 386 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W LSM7P53905 115 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W HHT1P61830 136 aa1.61□□□□□ -2.15
RTT107YHR154W PET191Q02772 108 aa1.61□□□□□ -2.15
RTT107YHR154W TRM12Q04235 462 aa1.61□□□□□ -2.15
RTT107YHR154W MCH1Q07376 486 aa1.61□□□□□ -2.15
RTT107YHR154W IRC25Q07951 179 aa1.61□□□□□ -2.15
RTT107YHR154W YLR361C-AQ3E795 98 aa1.61□□□□□ -2.15
RTT107YHR154W YCR043CP25361 127 aa1.61□□□□□ -2.15
RTT107YHR154W SFC1P33303 322 aa1.61□□□□□ -2.15
RTT107YHR154W ZRT3P34240 503 aa1.61□□□□□ -2.15
RTT107YHR154W MRPL24P36525 258 aaPredicted RBP1.61□□□□□ -2.15
RTT107YHR154W YBL081WP38180 368 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W GGC1P38988 300 aa1.61□□□□□ -2.15
RTT107YHR154W YER189WP40104 122 aa1.61□□□□□ -2.15
RTT107YHR154W YJL028WP47062 111 aa1.61□□□□□ -2.15
RTT107YHR154W PRM8P53174 237 aa1.61□□□□□ -2.15
RTT107YHR154W SPC24Q04477 213 aa1.61□□□□□ -2.15
RTT107YHR154W ERP1Q05359 219 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W YLR281CQ05863 155 aa1.61□□□□□ -2.15
RTT107YHR154W SWC7Q06707 132 aa1.61□□□□□ -2.15
RTT107YHR154W BOL1Q3E793 110 aa1.61□□□□□ -2.15
RTT107YHR154W SEC4P07560 215 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W RPS1BP23248 255 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W YBR285WP38354 144 aa1.61□□□□□ -2.15
RTT107YHR154W GVP36P40531 326 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W VMA10P48836 114 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W ELP3Q02908 557 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W PKR1Q03880 122 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W API2Q04413 109 aa1.61□□□□□ -2.15
RTT107YHR154W PAL1Q05518 499 aaKnown RBP1.61□□□□□ -2.15
RTT107YHR154W YPL257WQ08974 193 aa1.61□□□□□ -2.15
RTT107YHR154W IES3Q12345 250 aa1.61□□□□□ -2.15
RTT107YHR154W TRM10Q12400 293 aa1.61□□□□□ -2.15
RTT107YHR154W RIB3Q99258 208 aa1.61□□□□□ -2.15
RTT107YHR154W KIN28P06242 306 aa1.6□□□□□ -2.15
RTT107YHR154W NSP1P14907 823 aaKnown RBP1.6□□□□□ -2.15
RTT107YHR154W PET9P18239 318 aaKnown RBP1.6□□□□□ -2.15
RTT107YHR154W YBL010CP32788 280 aa1.6□□□□□ -2.15
RTT107YHR154W MSA2P36157 363 aa1.6□□□□□ -2.15
RTT107YHR154W YIL054WP40524 105 aa1.6□□□□□ -2.15
RTT107YHR154W DGA1Q08650 418 aa1.6□□□□□ -2.15
RTT107YHR154W UIP4Q08926 304 aa1.6□□□□□ -2.15
RTT107YHR154W YPL162CQ12042 273 aa1.6□□□□□ -2.15
RTT107YHR154W YCL021W-AQ96VH3 125 aa1.6□□□□□ -2.15
RTT107YHR154W RPL2AP0CX45 254 aaKnown RBP1.6□□□□□ -2.15
RTT107YHR154W RPL2BP0CX46 254 aaKnown RBP1.6□□□□□ -2.15
RTT107YHR154W STP22P25604 385 aa1.6□□□□□ -2.15
RTT107YHR154W AHC2P25649 128 aa1.6□□□□□ -2.15
RTT107YHR154W SUA7P29055 345 aaPredicted RBP1.6□□□□□ -2.15
RTT107YHR154W YBR063CP38083 404 aa1.6□□□□□ -2.15
RTT107YHR154W MIG3P39943 394 aa1.6□□□□□ -2.15
RTT107YHR154W YJR111CP47148 283 aaKnown RBP1.6□□□□□ -2.15
RTT107YHR154W PGU1P47180 361 aa1.6□□□□□ -2.15
RTT107YHR154W BNS1P50084 137 aa1.6□□□□□ -2.15
RTT107YHR154W SOL1P50278 321 aa1.6□□□□□ -2.15
RTT107YHR154W ARO8P53090 500 aaKnown RBP1.6□□□□□ -2.15
RTT107YHR154W YPL039WQ03080 316 aa1.6□□□□□ -2.15
RTT107YHR154W LOA1Q06508 300 aa1.6□□□□□ -2.15
RTT107YHR154W Q0297Q9ZZV8 51 aa1.6□□□□□ -2.15
RTT107YHR154W DSF1P0CX08 502 aa1.59□□□□□ -2.15
RTT107YHR154W YNR073CP0CX09 502 aa1.59□□□□□ -2.15
RTT107YHR154W CKS1P20486 150 aaKnown RBP1.59□□□□□ -2.15
RTT107YHR154W SFK1P35735 353 aa1.59□□□□□ -2.15
RTT107YHR154W YOR062CP36025 268 aa1.59□□□□□ -2.15
RTT107YHR154W UFD1P53044 361 aa1.59□□□□□ -2.15
RTT107YHR154W YGL193CP53097 103 aa1.59□□□□□ -2.15
RTT107YHR154W DDI2P0CH63 225 aa1.59□□□□□ -2.16
RTT107YHR154W DDI3P0CH64 225 aa1.59□□□□□ -2.16
RTT107YHR154W RPB5P20434 215 aa1.59□□□□□ -2.16
RTT107YHR154W RNP1P32385 249 aa1.59□□□□□ -2.16
RTT107YHR154W YKL102CP34249 101 aa1.59□□□□□ -2.16
RTT107YHR154W EFM1P38732 585 aa1.59□□□□□ -2.16
RTT107YHR154W IPI1P38803 334 aaPredicted RBP1.59□□□□□ -2.16
RTT107YHR154W AIM18P38884 321 aa1.59□□□□□ -2.16
RTT107YHR154W YIL152WP40455 235 aa1.59□□□□□ -2.16
RTT107YHR154W YGR017WP53210 297 aa1.59□□□□□ -2.16
RTT107YHR154W UBC7Q02159 165 aa1.59□□□□□ -2.16
RTT107YHR154W RMI1Q02685 241 aa1.59□□□□□ -2.16
RTT107YHR154W YPR174CQ06616 221 aaPredicted RBP1.59□□□□□ -2.16
RTT107YHR154W YOL014WQ08110 124 aa1.59□□□□□ -2.16
RTT107YHR154W PSF1Q12488 208 aa1.59□□□□□ -2.16
RTT107YHR154W SPS2P08459 502 aa1.59□□□□□ -2.16
RTT107YHR154W YND1P40009 630 aa1.59□□□□□ -2.16
RTT107YHR154W RFC2P40348 353 aa1.59□□□□□ -2.16
RTT107YHR154W CWC27Q02770 301 aa1.59□□□□□ -2.16
RTT107YHR154W AIM36Q03798 255 aa1.59□□□□□ -2.16
RTT107YHR154W HRD1Q08109 551 aa1.59□□□□□ -2.16
RTT107YHR154W YOR214CQ12282 236 aa1.59□□□□□ -2.16
RTT107YHR154W YHR139C-AO13536 103 aa1.58□□□□□ -2.16
RTT107YHR154W ADH3P07246 375 aaKnown RBP1.58□□□□□ -2.16
RTT107YHR154W SHE1P38200 338 aa1.58□□□□□ -2.16
RTT107YHR154W RRT13P40042 185 aa1.58□□□□□ -2.16
RTT107YHR154W ALG9P53868 555 aaKnown RBP1.58□□□□□ -2.16
RTT107YHR154W KTI11Q3E840 82 aa1.58□□□□□ -2.16
RTT107YHR154W YFR032C-BQ8TGU2 87 aa1.58□□□□□ -2.16
RTT107YHR154W FLO9P39712 1322 aa1.58□□□□□ -2.16
RTT107YHR154W ERD2P18414 219 aa1.58□□□□□ -2.16
RTT107YHR154W MAG1P22134 296 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 59 ms