RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W NOC4Q06512 552 aaPredicted RBP1□□□□□ -2.25
LOC1YFR001W PST2Q12335 198 aaKnown RBP1□□□□□ -2.25
LOC1YFR001W YLR412C-AQ3E742 68 aa1□□□□□ -2.25
LOC1YFR001W TRX3P25372 127 aa0.99□□□□□ -2.25
LOC1YFR001W STP22P25604 385 aa0.99□□□□□ -2.25
LOC1YFR001W UBC8P28263 218 aa0.99□□□□□ -2.25
LOC1YFR001W YBR242WP38331 238 aa0.99□□□□□ -2.25
LOC1YFR001W NSG1P38837 291 aa0.99□□□□□ -2.25
LOC1YFR001W NSA2P40078 261 aaKnown RBP0.99□□□□□ -2.25
LOC1YFR001W AIM36Q03798 255 aa0.99□□□□□ -2.25
LOC1YFR001W YPR203WQ08994 102 aa0.99□□□□□ -2.25
LOC1YFR001W DAS2Q12084 232 aa0.99□□□□□ -2.25
LOC1YFR001W YOR342CQ12182 319 aa0.99□□□□□ -2.25
LOC1YFR001W ATP20Q12233 115 aa0.99□□□□□ -2.25
LOC1YFR001W YPR014CQ6B0W2 109 aa0.99□□□□□ -2.25
LOC1YFR001W TAR1Q8TGM6 124 aa0.99□□□□□ -2.25
LOC1YFR001W MPM1P40364 252 aa0.98□□□□□ -2.25
LOC1YFR001W YGL235WP53071 178 aa0.98□□□□□ -2.25
LOC1YFR001W NRK1P53915 240 aa0.98□□□□□ -2.25
LOC1YFR001W AIM34Q03673 198 aa0.98□□□□□ -2.25
LOC1YFR001W YOR015WQ12169 119 aa0.98□□□□□ -2.25
LOC1YFR001W STF2P16965 84 aa0.97□□□□□ -2.25
LOC1YFR001W APA2P22108 325 aa0.97□□□□□ -2.25
LOC1YFR001W AHC2P25649 128 aa0.97□□□□□ -2.25
LOC1YFR001W CAF4P36130 643 aa0.97□□□□□ -2.25
LOC1YFR001W MAK5P38112 773 aaPredicted RBP0.97□□□□□ -2.25
LOC1YFR001W SBH1P52870 82 aa0.97□□□□□ -2.25
LOC1YFR001W PIR1Q03178 341 aa0.97□□□□□ -2.25
LOC1YFR001W GRX8Q05926 109 aa0.97□□□□□ -2.25
LOC1YFR001W MPD1Q12404 318 aaKnown RBP0.97□□□□□ -2.25
LOC1YFR001W RRT1P38192 103 aa0.96□□□□□ -2.26
LOC1YFR001W GRX3Q03835 250 aa0.96□□□□□ -2.26
LOC1YFR001W DGK1Q12382 290 aa0.96□□□□□ -2.26
LOC1YFR001W AHT1P29589 182 aa0.95□□□□□ -2.26
LOC1YFR001W SHG1P38337 142 aa0.95□□□□□ -2.26
LOC1YFR001W YHL037CP38733 133 aa0.95□□□□□ -2.26
LOC1YFR001W NSE4P43124 402 aa0.95□□□□□ -2.26
LOC1YFR001W FMP32P43557 207 aa0.95□□□□□ -2.26
LOC1YFR001W YHP1Q04116 353 aa0.95□□□□□ -2.26
LOC1YFR001W GAL83Q04739 417 aa0.95□□□□□ -2.26
LOC1YFR001W UPS1Q05776 175 aa0.95□□□□□ -2.26
LOC1YFR001W DUR1,2P32528 1835 aaKnown RBP0.94□□□□□ -2.26
LOC1YFR001W YBL010CP32788 280 aa0.94□□□□□ -2.26
LOC1YFR001W ETR1P38071 380 aa0.94□□□□□ -2.26
LOC1YFR001W YKL102CP34249 101 aa0.93□□□□□ -2.26
LOC1YFR001W YKR041WP36134 250 aa0.93□□□□□ -2.26
LOC1YFR001W SNO1Q03144 224 aa0.93□□□□□ -2.26
LOC1YFR001W DML1Q03652 475 aa0.93□□□□□ -2.26
LOC1YFR001W ELP6Q04868 273 aa0.93□□□□□ -2.26
LOC1YFR001W SHH4Q06236 168 aa0.93□□□□□ -2.26
LOC1YFR001W BRX1Q08235 291 aaKnown RBP0.93□□□□□ -2.26
LOC1YFR001W YMR030W-AQ3E760 96 aa0.93□□□□□ -2.26
LOC1YFR001W MAK31P23059 88 aa0.92□□□□□ -2.26
LOC1YFR001W YFL051CP43552 160 aa0.92□□□□□ -2.26
LOC1YFR001W GRX5Q02784 150 aa0.92□□□□□ -2.26
LOC1YFR001W GPI17Q04080 534 aa0.92□□□□□ -2.26
LOC1YFR001W ATG41Q12048 136 aa0.92□□□□□ -2.26
LOC1YFR001W YOR381W-AQ3E804 55 aa0.92□□□□□ -2.26
LOC1YFR001W HSP30P25619 332 aa0.91□□□□□ -2.26
LOC1YFR001W UGX2P32772 223 aa0.91□□□□□ -2.26
LOC1YFR001W CPR5P35176 225 aa0.91□□□□□ -2.26
LOC1YFR001W RFC2P40348 353 aa0.91□□□□□ -2.26
LOC1YFR001W SBH2P52871 88 aa0.91□□□□□ -2.26
LOC1YFR001W FIT1Q04433 528 aa0.91□□□□□ -2.26
LOC1YFR001W FYV4P38783 130 aaPredicted RBP0.9□□□□□ -2.27
LOC1YFR001W YNL200CP40165 246 aaKnown RBP0.9□□□□□ -2.27
LOC1YFR001W CCS1P40202 249 aaKnown RBP0.9□□□□□ -2.27
LOC1YFR001W RIM9Q04734 239 aa0.9□□□□□ -2.27
LOC1YFR001W CLG1P35190 452 aa0.89□□□□□ -2.27
LOC1YFR001W HOP2P53187 214 aa0.89□□□□□ -2.27
LOC1YFR001W VPS28Q02767 242 aa0.89□□□□□ -2.27
LOC1YFR001W YET3Q07451 203 aa0.89□□□□□ -2.27
LOC1YFR001W GCY1P14065 312 aaKnown RBP RIP-Chip data0.88□□□□□ -2.27not detected
LOC1YFR001W SEC14P24280 304 aaKnown RBP0.88□□□□□ -2.27
LOC1YFR001W YRA2P36036 203 aaKnown RBP RIP-Chip data0.88□□□□□ -2.27not detected
LOC1YFR001W NVJ1P38881 321 aa0.88□□□□□ -2.27
LOC1YFR001W DCV1P43595 202 aa0.88□□□□□ -2.27
LOC1YFR001W YKR005CQ02203 525 aa0.88□□□□□ -2.27
LOC1YFR001W HPT1Q04178 221 aaKnown RBP0.88□□□□□ -2.27
LOC1YFR001W YPR127WQ06494 345 aa0.88□□□□□ -2.27
LOC1YFR001W CCW12Q12127 133 aa0.88□□□□□ -2.27
LOC1YFR001W YOR214CQ12282 236 aa0.88□□□□□ -2.27
LOC1YFR001W TTI2P47168 421 aa0.87□□□□□ -2.27
LOC1YFR001W SOL1P50278 321 aa0.87□□□□□ -2.27
LOC1YFR001W ATP7P30902 174 aa0.86□□□□□ -2.27
LOC1YFR001W HHT1P61830 136 aa0.86□□□□□ -2.27
LOC1YFR001W YAR064WP39563 99 aa0.85□□□□□ -2.27
LOC1YFR001W YIL102CP40488 101 aa0.85□□□□□ -2.27
LOC1YFR001W SHB17P36136 271 aaKnown RBP0.84□□□□□ -2.27
LOC1YFR001W POG1P40473 351 aa0.84□□□□□ -2.27
LOC1YFR001W PAC10P48363 199 aa0.84□□□□□ -2.27
LOC1YFR001W JAC1P53193 184 aa0.84□□□□□ -2.27
LOC1YFR001W TIM13P53299 105 aa0.84□□□□□ -2.27
LOC1YFR001W AVO2Q04749 426 aa0.84□□□□□ -2.27
LOC1YFR001W FMP49A0A023PZB3 126 aa0.83□□□□□ -2.28
LOC1YFR001W RAD6P06104 172 aa0.83□□□□□ -2.28
LOC1YFR001W YKR070WP36151 352 aaKnown RBP0.83□□□□□ -2.28
LOC1YFR001W YEL073CP39974 107 aa0.83□□□□□ -2.28
LOC1YFR001W GIM3P53900 129 aa0.83□□□□□ -2.28
LOC1YFR001W GRE1Q08969 168 aa0.83□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms