RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W SCM4P32564 187 aa4.59□□□□□ -1.67
FOB1YDR110W RPL14AP36105 138 aaKnown RBP4.59□□□□□ -1.67
FOB1YDR110W POP8P38208 133 aa4.59□□□□□ -1.67
FOB1YDR110W ERV15P38312 142 aa4.59□□□□□ -1.67
FOB1YDR110W RPL14BP38754 138 aaKnown RBP4.59□□□□□ -1.67
FOB1YDR110W TIM17P39515 158 aa4.59□□□□□ -1.67
FOB1YDR110W AVT7P40501 490 aa4.59□□□□□ -1.67
FOB1YDR110W NSE4P43124 402 aa4.59□□□□□ -1.67
FOB1YDR110W SBH1P52870 82 aa4.59□□□□□ -1.67
FOB1YDR110W DOC1P53068 250 aa4.59□□□□□ -1.67
FOB1YDR110W YGR015CP53208 328 aa4.59□□□□□ -1.67
FOB1YDR110W YNL033WP53964 284 aa4.59□□□□□ -1.67
FOB1YDR110W YNL019CP53975 284 aa4.59□□□□□ -1.67
FOB1YDR110W YCL001W-AP87012 153 aa4.59□□□□□ -1.67
FOB1YDR110W NAT3Q06504 195 aa4.59□□□□□ -1.67
FOB1YDR110W RPS19AP07280 144 aaKnown RBP4.58□□□□□ -1.68
FOB1YDR110W RPS19BP07281 144 aaPredicted RBP4.58□□□□□ -1.68
FOB1YDR110W RPL23AP0CX41 137 aaKnown RBP4.58□□□□□ -1.68
FOB1YDR110W RPL23BP0CX42 137 aaKnown RBP4.58□□□□□ -1.68
FOB1YDR110W UBC5P15732 148 aa4.58□□□□□ -1.68
FOB1YDR110W ANB1P19211 157 aa4.58□□□□□ -1.68
FOB1YDR110W TTI2P47168 421 aa4.58□□□□□ -1.68
FOB1YDR110W SCW11P53189 542 aa4.58□□□□□ -1.68
FOB1YDR110W NRD1P53617 575 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
FOB1YDR110W WSC2P53832 503 aa4.58□□□□□ -1.68
FOB1YDR110W SCW10Q04951 389 aa4.58□□□□□ -1.68
FOB1YDR110W ERG4P25340 473 aa4.58□□□□□ -1.68
FOB1YDR110W RPL16AP26784 199 aaKnown RBP4.58□□□□□ -1.68
FOB1YDR110W AGA1P32323 725 aa4.58□□□□□ -1.68
FOB1YDR110W YRA2P36036 203 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
FOB1YDR110W BUD25P85052 153 aa4.58□□□□□ -1.68
FOB1YDR110W SYC1Q08553 188 aaPredicted RBP4.58□□□□□ -1.68
FOB1YDR110W TIR4Q12218 487 aaPredicted RBP4.58□□□□□ -1.68
FOB1YDR110W YMR316C-AI2HB70 103 aa4.57□□□□□ -1.68
FOB1YDR110W HYP2P23301 157 aaKnown RBP4.57□□□□□ -1.68
FOB1YDR110W PEX2P32800 271 aa4.57□□□□□ -1.68
FOB1YDR110W YNK1P36010 153 aaKnown RBP4.57□□□□□ -1.68
FOB1YDR110W YJL218WP40892 196 aaKnown RBP4.57□□□□□ -1.68
FOB1YDR110W CAT5P41735 233 aa4.57□□□□□ -1.68
FOB1YDR110W GPI2P46961 280 aa4.57□□□□□ -1.68
FOB1YDR110W RDL1Q12305 139 aaKnown RBP4.57□□□□□ -1.68
FOB1YDR110W YLR412C-AQ3E742 68 aa4.57□□□□□ -1.68
FOB1YDR110W KTI11Q3E840 82 aa4.57□□□□□ -1.68
FOB1YDR110W SGA1P08019 549 aa4.56□□□□□ -1.68
FOB1YDR110W SPT15P13393 240 aaKnown RBP4.56□□□□□ -1.68
FOB1YDR110W YER181CP40097 107 aa4.56□□□□□ -1.68
FOB1YDR110W GAS3Q03655 524 aa4.56□□□□□ -1.68
FOB1YDR110W FCF1Q05498 189 aaPredicted RBP4.56□□□□□ -1.68
FOB1YDR110W YLR177WQ06251 628 aa4.56□□□□□ -1.68
FOB1YDR110W MCP1Q12106 302 aa4.56□□□□□ -1.68
FOB1YDR110W ISD11Q6Q560 94 aa4.56□□□□□ -1.68
FOB1YDR110W RAS1P01119 309 aa4.55□□□□□ -1.68
FOB1YDR110W RAD10P06838 210 aa4.55□□□□□ -1.68
FOB1YDR110W YER190C-BP0CX94 160 aa4.55□□□□□ -1.68
FOB1YDR110W YEL077W-AP0CX95 160 aa4.55□□□□□ -1.68
FOB1YDR110W YGR296C-BP0CX96 160 aa4.55□□□□□ -1.68
FOB1YDR110W YPL283W-BP0CX97 160 aa4.55□□□□□ -1.68
FOB1YDR110W YPR204C-AP0CX98 160 aa4.55□□□□□ -1.68
FOB1YDR110W BGL2P15703 313 aaKnown RBP4.55□□□□□ -1.68
FOB1YDR110W YHR130CP38834 111 aa4.55□□□□□ -1.68
FOB1YDR110W AST2P39945 430 aaKnown RBP4.55□□□□□ -1.68
FOB1YDR110W YGL088WP53151 121 aa4.55□□□□□ -1.68
FOB1YDR110W SAY1P53324 424 aa4.55□□□□□ -1.68
FOB1YDR110W OSH6Q02201 448 aa4.55□□□□□ -1.68
FOB1YDR110W YOR292CQ08743 309 aa4.55□□□□□ -1.68
FOB1YDR110W EAF3Q12432 401 aa4.55□□□□□ -1.68
FOB1YDR110W YPR014CQ6B0W2 109 aa4.55□□□□□ -1.68
FOB1YDR110W FIG2P25653 1609 aa4.55□□□□□ -1.68
FOB1YDR110W HEM4P06174 275 aa4.55□□□□□ -1.68
FOB1YDR110W MRS3P10566 314 aa4.55□□□□□ -1.68
FOB1YDR110W TOM40P23644 387 aaKnown RBP4.55□□□□□ -1.68
FOB1YDR110W SDH4P37298 181 aa4.55□□□□□ -1.68
FOB1YDR110W YMC2P38087 329 aa4.55□□□□□ -1.68
FOB1YDR110W CHS7P38843 316 aa4.55□□□□□ -1.68
FOB1YDR110W RPB11P38902 120 aa4.55□□□□□ -1.68
FOB1YDR110W PRM5P40476 318 aa4.55□□□□□ -1.68
FOB1YDR110W FIS1P40515 155 aa4.55□□□□□ -1.68
FOB1YDR110W UIP4Q08926 304 aa4.55□□□□□ -1.68
FOB1YDR110W DUR1,2P32528 1835 aaKnown RBP4.54□□□□□ -1.68
FOB1YDR110W SNO3P43544 222 aa4.54□□□□□ -1.68
FOB1YDR110W SNO2P53823 222 aa4.54□□□□□ -1.68
FOB1YDR110W YLR346CQ06139 101 aa4.54□□□□□ -1.68
FOB1YDR110W YDL211CQ12121 372 aa4.54□□□□□ -1.68
FOB1YDR110W YFR032C-BQ8TGU2 87 aa4.54□□□□□ -1.68
FOB1YDR110W FLO11P08640 1367 aa4.54□□□□□ -1.68
FOB1YDR110W ATP5P09457 212 aa4.53□□□□□ -1.68
FOB1YDR110W COX10P21592 462 aa4.53□□□□□ -1.68
FOB1YDR110W GAA1P39012 614 aa4.53□□□□□ -1.68
FOB1YDR110W AVT2P39981 480 aa4.53□□□□□ -1.68
FOB1YDR110W EDC2P40023 145 aaPredicted RBP4.53□□□□□ -1.68
FOB1YDR110W GON7P46984 123 aa4.53□□□□□ -1.68
FOB1YDR110W AAH1P53909 347 aa4.53□□□□□ -1.68
FOB1YDR110W RAD28Q12021 506 aa4.53□□□□□ -1.68
FOB1YDR110W ATX2Q12067 313 aa4.53□□□□□ -1.68
FOB1YDR110W PCL9Q12477 304 aa4.53□□□□□ -1.68
FOB1YDR110W TDA8Q6B2U8 126 aa4.53□□□□□ -1.68
FOB1YDR110W CYC7P00045 113 aa4.52□□□□□ -1.69
FOB1YDR110W RPS8AP0CX39 200 aaKnown RBP4.52□□□□□ -1.69
FOB1YDR110W RPS8BP0CX40 200 aaKnown RBP4.52□□□□□ -1.69
FOB1YDR110W ARO2P28777 376 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 167.9 ms