RNA–Protein interactions for RNA: YDR081C

PDC2, Transcript of Transcription factor for thiamine-regulated genes, yeastyeast

Gene PDC2, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDC2YDR081C MYO1P08964 1928 aa2.43□□□□□ -2.02
PDC2YDR081C YER039C-AP0CD97 72 aa2.42□□□□□ -2.02
PDC2YDR081C CKS1P20486 150 aaKnown RBP2.42□□□□□ -2.02
PDC2YDR081C SRL3P36167 246 aa2.42□□□□□ -2.02
PDC2YDR081C RPF1P38805 295 aaKnown RBP2.42□□□□□ -2.02
PDC2YDR081C CAT5P41735 233 aa2.42□□□□□ -2.02
PDC2YDR081C SCS3P53012 380 aa2.42□□□□□ -2.02
PDC2YDR081C VHS1Q03785 461 aa2.42□□□□□ -2.02
PDC2YDR081C YDL180WQ12301 547 aa2.42□□□□□ -2.02
PDC2YDR081C EAF3Q12432 401 aa2.42□□□□□ -2.02
PDC2YDR081C FMP49A0A023PZB3 126 aa2.42□□□□□ -2.02
PDC2YDR081C VAR1P02381 398 aa2.42□□□□□ -2.02
PDC2YDR081C YGL041W-AP0C5N3 154 aa2.42□□□□□ -2.02
PDC2YDR081C YCR025CP25352 136 aa2.42□□□□□ -2.02
PDC2YDR081C URA10P30402 227 aa2.42□□□□□ -2.02
PDC2YDR081C RPR2P40571 144 aa2.42□□□□□ -2.02
PDC2YDR081C SFT1P43682 97 aa2.42□□□□□ -2.02
PDC2YDR081C AAH1P53909 347 aa2.42□□□□□ -2.02
PDC2YDR081C YNL010WP53981 241 aaKnown RBP2.42□□□□□ -2.02
PDC2YDR081C INP1Q03694 420 aa2.42□□□□□ -2.02
PDC2YDR081C YPL278CQ08990 100 aa2.42□□□□□ -2.02
PDC2YDR081C TSC3Q3E790 80 aa2.42□□□□□ -2.02
PDC2YDR081C PTC1P35182 281 aa2.41□□□□□ -2.02
PDC2YDR081C YKR070WP36151 352 aaKnown RBP2.41□□□□□ -2.02
PDC2YDR081C TIM17P39515 158 aa2.41□□□□□ -2.02
PDC2YDR081C TIF34P40217 347 aaKnown RBP2.41□□□□□ -2.02
PDC2YDR081C YGL082WP53155 381 aa2.41□□□□□ -2.02
PDC2YDR081C YLR177WQ06251 628 aa2.41□□□□□ -2.02
PDC2YDR081C NDD1Q08887 554 aa2.41□□□□□ -2.02
PDC2YDR081C TIR4Q12218 487 aaPredicted RBP2.41□□□□□ -2.02
PDC2YDR081C AYT1Q12226 474 aa2.41□□□□□ -2.02
PDC2YDR081C YPR014CQ6B0W2 109 aa2.41□□□□□ -2.02
PDC2YDR081C Q0255P03881 472 aa2.41□□□□□ -2.02
PDC2YDR081C LDB16P25587 256 aa2.41□□□□□ -2.02
PDC2YDR081C SEC17P32602 292 aa2.41□□□□□ -2.02
PDC2YDR081C GVP36P40531 326 aaKnown RBP2.41□□□□□ -2.02
PDC2YDR081C FIP1P45976 327 aa2.41□□□□□ -2.02
PDC2YDR081C ALG9P53868 555 aaKnown RBP2.41□□□□□ -2.02
PDC2YDR081C PIR3Q03180 325 aa2.41□□□□□ -2.02
PDC2YDR081C SPC3Q12133 184 aa2.41□□□□□ -2.02
PDC2YDR081C BOL1Q3E793 110 aa2.41□□□□□ -2.02
PDC2YDR081C YBL008W-AQ3E821 79 aa2.41□□□□□ -2.02
PDC2YDR081C SPS2P08459 502 aa2.4□□□□□ -2.02
PDC2YDR081C TIR1P10863 254 aa2.4□□□□□ -2.02
PDC2YDR081C MAG1P22134 296 aaKnown RBP2.4□□□□□ -2.02
PDC2YDR081C FMP46P36141 133 aaKnown RBP2.4□□□□□ -2.02
PDC2YDR081C FMP48P53233 369 aa2.4□□□□□ -2.02
PDC2YDR081C RPL22BP56628 122 aaKnown RBP2.4□□□□□ -2.02
PDC2YDR081C YKR005CQ02203 525 aa2.4□□□□□ -2.02
PDC2YDR081C ADD37Q03233 198 aa2.4□□□□□ -2.02
PDC2YDR081C YHC1Q05900 231 aaKnown RBP2.4□□□□□ -2.02
PDC2YDR081C FCF2Q12035 217 aaPredicted RBP2.4□□□□□ -2.02
PDC2YDR081C TDA8Q6B2U8 126 aa2.4□□□□□ -2.02
PDC2YDR081C SRP21P32342 167 aa2.4□□□□□ -2.03
PDC2YDR081C YBR063CP38083 404 aa2.4□□□□□ -2.03
PDC2YDR081C YBL081WP38180 368 aaKnown RBP2.4□□□□□ -2.03
PDC2YDR081C EDC2P40023 145 aaPredicted RBP2.4□□□□□ -2.03
PDC2YDR081C LSM8P47093 109 aaKnown RBP2.4□□□□□ -2.03
PDC2YDR081C COS10P52924 374 aa2.4□□□□□ -2.03
PDC2YDR081C YGL088WP53151 121 aa2.4□□□□□ -2.03
PDC2YDR081C APJ1P53940 528 aa2.4□□□□□ -2.03
PDC2YDR081C YMR099CQ03161 297 aaKnown RBP2.4□□□□□ -2.03
PDC2YDR081C TKL2P33315 681 aa2.39□□□□□ -2.03
PDC2YDR081C ETR1P38071 380 aa2.39□□□□□ -2.03
PDC2YDR081C YHR140WP38842 239 aa2.39□□□□□ -2.03
PDC2YDR081C GGC1P38988 300 aa2.39□□□□□ -2.03
PDC2YDR081C DAD3P69850 94 aa2.39□□□□□ -2.03
PDC2YDR081C VPS28Q02767 242 aa2.39□□□□□ -2.03
PDC2YDR081C YPS3Q12303 508 aa2.39□□□□□ -2.03
PDC2YDR081C KTI11Q3E840 82 aa2.39□□□□□ -2.03
PDC2YDR081C YFR032C-BQ8TGU2 87 aa2.39□□□□□ -2.03
PDC2YDR081C FLO11P08640 1367 aa2.39□□□□□ -2.03
PDC2YDR081C IMP1P28627 190 aa2.39□□□□□ -2.03
PDC2YDR081C SMP1P38128 452 aa2.39□□□□□ -2.03
PDC2YDR081C PRE5P40302 234 aaKnown RBP2.39□□□□□ -2.03
PDC2YDR081C PRM5P40476 318 aa2.39□□□□□ -2.03
PDC2YDR081C GPI2P46961 280 aa2.39□□□□□ -2.03
PDC2YDR081C TTI2P47168 421 aa2.39□□□□□ -2.03
PDC2YDR081C SDS23P53172 527 aa2.39□□□□□ -2.03
PDC2YDR081C YPR011CQ12251 326 aa2.39□□□□□ -2.03
PDC2YDR081C DDP1Q99321 188 aaKnown RBP2.39□□□□□ -2.03
PDC2YDR081C CCA1P21269 546 aa2.38□□□□□ -2.03
PDC2YDR081C SHB17P36136 271 aaKnown RBP2.38□□□□□ -2.03
PDC2YDR081C YNL033WP53964 284 aa2.38□□□□□ -2.03
PDC2YDR081C YNL019CP53975 284 aa2.38□□□□□ -2.03
PDC2YDR081C GAS3Q03655 524 aa2.38□□□□□ -2.03
PDC2YDR081C SCW10Q04951 389 aa2.38□□□□□ -2.03
PDC2YDR081C FSH2Q05015 223 aa2.38□□□□□ -2.03
PDC2YDR081C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
PDC2YDR081C RPS8AP0CX39 200 aaKnown RBP2.38□□□□□ -2.03
PDC2YDR081C RPS8BP0CX40 200 aaKnown RBP2.38□□□□□ -2.03
PDC2YDR081C SPT14P32363 452 aa2.38□□□□□ -2.03
PDC2YDR081C AST2P39945 430 aaKnown RBP2.38□□□□□ -2.03
PDC2YDR081C YEA6P39953 335 aa2.38□□□□□ -2.03
PDC2YDR081C RPE1P46969 238 aa2.38□□□□□ -2.03
PDC2YDR081C YGL230CP53074 147 aa2.38□□□□□ -2.03
PDC2YDR081C RNH202Q05635 350 aa2.38□□□□□ -2.03
PDC2YDR081C OCA6Q12454 224 aa2.38□□□□□ -2.03
PDC2YDR081C YLR412C-AQ3E742 68 aa2.38□□□□□ -2.03
PDC2YDR081C SAS5Q99314 248 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 77.1 ms