RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W SMP1P38128 452 aa4.73□□□□□ -1.65
VMS1YDR049W RFS1P38234 210 aaKnown RBP4.73□□□□□ -1.65
VMS1YDR049W ADD37Q03233 198 aa4.73□□□□□ -1.65
VMS1YDR049W NAT3Q06504 195 aa4.73□□□□□ -1.65
VMS1YDR049W YLR112WQ12130 139 aa4.73□□□□□ -1.65
VMS1YDR049W KTI11Q3E840 82 aa4.73□□□□□ -1.65
VMS1YDR049W TDA8Q6B2U8 126 aa4.73□□□□□ -1.65
VMS1YDR049W YLR462WO13556 202 aa4.72□□□□□ -1.65
VMS1YDR049W CHS7P38843 316 aa4.72□□□□□ -1.65
VMS1YDR049W AST2P39945 430 aaKnown RBP4.72□□□□□ -1.65
VMS1YDR049W YEA6P39953 335 aa4.72□□□□□ -1.65
VMS1YDR049W YEL075CP39972 122 aa4.72□□□□□ -1.65
VMS1YDR049W YER181CP40097 107 aa4.72□□□□□ -1.65
VMS1YDR049W YER189WP40104 122 aa4.72□□□□□ -1.65
VMS1YDR049W PRM5P40476 318 aa4.72□□□□□ -1.65
VMS1YDR049W YIL024CP40543 189 aa4.72□□□□□ -1.65
VMS1YDR049W YGL230CP53074 147 aa4.72□□□□□ -1.65
VMS1YDR049W RNH202Q05635 350 aa4.72□□□□□ -1.65
VMS1YDR049W SCP1Q08873 200 aa4.72□□□□□ -1.65
VMS1YDR049W BCK1Q01389 1478 aa4.71□□□□□ -1.65
VMS1YDR049W PRE1P22141 198 aaKnown RBP4.71□□□□□ -1.66
VMS1YDR049W IMP1P28627 190 aa4.71□□□□□ -1.66
VMS1YDR049W SKI6P46948 246 aaPredicted RBP4.71□□□□□ -1.66
VMS1YDR049W DIE2P50076 525 aa4.71□□□□□ -1.66
VMS1YDR049W GRH1Q04410 372 aaKnown RBP4.71□□□□□ -1.66
VMS1YDR049W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
VMS1YDR049W YLR042CQ07990 161 aa4.71□□□□□ -1.66
VMS1YDR049W DGK1Q12382 290 aa4.71□□□□□ -1.66
VMS1YDR049W ATP5P09457 212 aa4.71□□□□□ -1.66
VMS1YDR049W RPS8AP0CX39 200 aaKnown RBP4.71□□□□□ -1.66
VMS1YDR049W RPS8BP0CX40 200 aaKnown RBP4.71□□□□□ -1.66
VMS1YDR049W SPT14P32363 452 aa4.71□□□□□ -1.66
VMS1YDR049W MIX23P38162 196 aa4.71□□□□□ -1.66
VMS1YDR049W IRC22P40006 225 aa4.71□□□□□ -1.66
VMS1YDR049W SNM1P40993 198 aa4.71□□□□□ -1.66
VMS1YDR049W YPL162CQ12042 273 aa4.71□□□□□ -1.66
VMS1YDR049W YLR412C-AQ3E742 68 aa4.71□□□□□ -1.66
VMS1YDR049W AUS1Q08409 1394 aa4.7□□□□□ -1.66
VMS1YDR049W LDS1P31379 325 aa4.7□□□□□ -1.66
VMS1YDR049W RPL14AP36105 138 aaKnown RBP4.7□□□□□ -1.66
VMS1YDR049W ETR1P38071 380 aa4.7□□□□□ -1.66
VMS1YDR049W RPL14BP38754 138 aaKnown RBP4.7□□□□□ -1.66
VMS1YDR049W RSM27P53305 110 aa4.7□□□□□ -1.66
VMS1YDR049W GAS3Q03655 524 aa4.7□□□□□ -1.66
VMS1YDR049W SCW10Q04951 389 aa4.7□□□□□ -1.66
VMS1YDR049W SML1Q04964 104 aa4.7□□□□□ -1.66
VMS1YDR049W FSH2Q05015 223 aa4.7□□□□□ -1.66
VMS1YDR049W YLR179CQ06252 201 aaKnown RBP4.7□□□□□ -1.66
VMS1YDR049W HUT1Q12520 339 aa4.7□□□□□ -1.66
VMS1YDR049W YFR032C-BQ8TGU2 87 aa4.7□□□□□ -1.66
VMS1YDR049W HHF1P02309 103 aaKnown RBP4.69□□□□□ -1.66
VMS1YDR049W YJL213WP40896 331 aa4.69□□□□□ -1.66
VMS1YDR049W TDA4P47153 279 aa4.69□□□□□ -1.66
VMS1YDR049W SBH1P52870 82 aa4.69□□□□□ -1.66
VMS1YDR049W YPR011CQ12251 326 aa4.69□□□□□ -1.66
VMS1YDR049W PEX4P29340 183 aa4.69□□□□□ -1.66
VMS1YDR049W YBR090CP38253 122 aa4.69□□□□□ -1.66
VMS1YDR049W AVT2P39981 480 aa4.69□□□□□ -1.66
VMS1YDR049W BUD25P85052 153 aa4.69□□□□□ -1.66
VMS1YDR049W LPP1Q04396 274 aa4.69□□□□□ -1.66
VMS1YDR049W YCR075W-AQ3E830 75 aa4.69□□□□□ -1.66
VMS1YDR049W HTL1Q9URQ5 78 aa4.69□□□□□ -1.66
VMS1YDR049W YRA2P36036 203 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
VMS1YDR049W UTP30P36144 274 aaKnown RBP4.68□□□□□ -1.66
VMS1YDR049W SWT21P53873 357 aaPredicted RBP4.68□□□□□ -1.66
VMS1YDR049W YDL211CQ12121 372 aa4.68□□□□□ -1.66
VMS1YDR049W GTT2Q12390 233 aa4.68□□□□□ -1.66
VMS1YDR049W IZH2Q12442 317 aa4.68□□□□□ -1.66
VMS1YDR049W YGL194C-AQ2V2P6 80 aa4.68□□□□□ -1.66
VMS1YDR049W RPB11P38902 120 aa4.67□□□□□ -1.66
VMS1YDR049W DUR1,2P32528 1835 aaKnown RBP4.67□□□□□ -1.66
VMS1YDR049W NSG1P38837 291 aa4.66□□□□□ -1.66
VMS1YDR049W YJL218WP40892 196 aaKnown RBP4.66□□□□□ -1.66
VMS1YDR049W FMP42Q04991 504 aa4.66□□□□□ -1.66
VMS1YDR049W PHO89P38361 574 aa4.66□□□□□ -1.66
VMS1YDR049W PTI1P39927 425 aaPredicted RBP4.66□□□□□ -1.66
VMS1YDR049W YIL012WP40551 113 aa4.66□□□□□ -1.66
VMS1YDR049W GON7P46984 123 aa4.66□□□□□ -1.66
VMS1YDR049W YGR015CP53208 328 aa4.66□□□□□ -1.66
VMS1YDR049W TAD3Q9URQ3 322 aa4.66□□□□□ -1.66
VMS1YDR049W REP2P03872 296 aa4.65□□□□□ -1.66
VMS1YDR049W HYP2P23301 157 aaKnown RBP4.65□□□□□ -1.66
VMS1YDR049W ERG2P32352 222 aa4.65□□□□□ -1.66
VMS1YDR049W CSE2P33308 149 aa4.65□□□□□ -1.66
VMS1YDR049W YGL193CP53097 103 aa4.65□□□□□ -1.66
VMS1YDR049W TVP18Q04767 167 aa4.65□□□□□ -1.66
VMS1YDR049W NIP7Q08962 181 aaKnown RBP4.65□□□□□ -1.66
VMS1YDR049W YAL063C-AQ3E791 96 aa4.65□□□□□ -1.66
VMS1YDR049W BGL2P15703 313 aaKnown RBP4.64□□□□□ -1.67
VMS1YDR049W NSE4P43124 402 aa4.64□□□□□ -1.67
VMS1YDR049W SNO3P43544 222 aa4.64□□□□□ -1.67
VMS1YDR049W ELC1Q03071 99 aa4.64□□□□□ -1.67
VMS1YDR049W UBC5P15732 148 aa4.64□□□□□ -1.67
VMS1YDR049W RPB3P16370 318 aaKnown RBP4.64□□□□□ -1.67
VMS1YDR049W OMA1P36163 345 aa4.64□□□□□ -1.67
VMS1YDR049W FIS1P40515 155 aa4.64□□□□□ -1.67
VMS1YDR049W EMI1Q04406 187 aa4.64□□□□□ -1.67
VMS1YDR049W AHT1P29589 182 aa4.63□□□□□ -1.67
VMS1YDR049W ZRT3P34240 503 aa4.63□□□□□ -1.67
VMS1YDR049W RCN1P36054 211 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms