RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W MRPL20P22354 195 aaPredicted RBP1.12□□□□□ -2.23
CDC36YDL165W TRX3P25372 127 aa1.12□□□□□ -2.23
CDC36YDL165W YCR100CP25606 316 aa1.12□□□□□ -2.23
CDC36YDL165W PAU3P25610 124 aa1.12□□□□□ -2.23
CDC36YDL165W SRP21P32342 167 aa1.12□□□□□ -2.23
CDC36YDL165W GLC7P32598 312 aaKnown RBP1.12□□□□□ -2.23
CDC36YDL165W UTR5P32630 166 aa1.12□□□□□ -2.23
CDC36YDL165W TOA2P32774 122 aa1.12□□□□□ -2.23
CDC36YDL165W COX13P32799 129 aa1.12□□□□□ -2.23
CDC36YDL165W ZRT1P32804 376 aa1.12□□□□□ -2.23
CDC36YDL165W MRPL6P32904 214 aa1.12□□□□□ -2.23
CDC36YDL165W SKN1P33336 771 aa1.12□□□□□ -2.23
CDC36YDL165W ZRT3P34240 503 aa1.12□□□□□ -2.23
CDC36YDL165W SHB17P36136 271 aaKnown RBP1.12□□□□□ -2.23
CDC36YDL165W YBR063CP38083 404 aa1.12□□□□□ -2.23
CDC36YDL165W MIX23P38162 196 aa1.12□□□□□ -2.23
CDC36YDL165W TRS20P38334 175 aa1.12□□□□□ -2.23
CDC36YDL165W ATX1P38636 73 aa1.12□□□□□ -2.23
CDC36YDL165W MED6P38782 295 aa1.12□□□□□ -2.23
CDC36YDL165W YHR138CP38841 114 aaPredicted RBP1.12□□□□□ -2.23
CDC36YDL165W BAT1P38891 393 aaKnown RBP1.12□□□□□ -2.23
CDC36YDL165W YEA4P40004 342 aa1.12□□□□□ -2.23
CDC36YDL165W GLE2P40066 365 aa1.12□□□□□ -2.23
CDC36YDL165W PRM5P40476 318 aa1.12□□□□□ -2.23
CDC36YDL165W YIL054WP40524 105 aa1.12□□□□□ -2.23
CDC36YDL165W PAM16P42949 149 aa1.12□□□□□ -2.23
CDC36YDL165W OST2P46964 130 aa1.12□□□□□ -2.23
CDC36YDL165W AIM25P47140 327 aa1.12□□□□□ -2.23
CDC36YDL165W TTI2P47168 421 aa1.12□□□□□ -2.23
CDC36YDL165W ERG25P53045 309 aa1.12□□□□□ -2.23
CDC36YDL165W YGL230CP53074 147 aa1.12□□□□□ -2.23
CDC36YDL165W ALG13P53178 202 aa1.12□□□□□ -2.23
CDC36YDL165W VHT1P53241 593 aa1.12□□□□□ -2.23
CDC36YDL165W YNR048WP53740 393 aa1.12□□□□□ -2.23
CDC36YDL165W YNL033WP53964 284 aa1.12□□□□□ -2.23
CDC36YDL165W YNL019CP53975 284 aa1.12□□□□□ -2.23
CDC36YDL165W GRX5Q02784 150 aa1.12□□□□□ -2.23
CDC36YDL165W SDC1Q03323 175 aa1.12□□□□□ -2.23
CDC36YDL165W YML079WQ03629 201 aa1.12□□□□□ -2.23
CDC36YDL165W GAS3Q03655 524 aa1.12□□□□□ -2.23
CDC36YDL165W GRH1Q04410 372 aaKnown RBP1.12□□□□□ -2.23
CDC36YDL165W INM2Q05533 292 aa1.12□□□□□ -2.23
CDC36YDL165W GRX8Q05926 109 aa1.12□□□□□ -2.23
CDC36YDL165W CTR3Q06686 241 aa1.12□□□□□ -2.23
CDC36YDL165W YLR042CQ07990 161 aa1.12□□□□□ -2.23
CDC36YDL165W COQ10Q08058 207 aa1.12□□□□□ -2.23
CDC36YDL165W YOL024WQ08172 172 aa1.12□□□□□ -2.23
CDC36YDL165W YOR376WQ08900 122 aa1.12□□□□□ -2.23
CDC36YDL165W FIT3Q08907 204 aa1.12□□□□□ -2.23
CDC36YDL165W FCY1Q12178 158 aa1.12□□□□□ -2.23
CDC36YDL165W TIR4Q12218 487 aaPredicted RBP1.12□□□□□ -2.23
CDC36YDL165W PRP46Q12417 451 aaPredicted RBP1.12□□□□□ -2.23
CDC36YDL165W EAF3Q12432 401 aa1.12□□□□□ -2.23
CDC36YDL165W PEX11Q12462 236 aa1.12□□□□□ -2.23
CDC36YDL165W YLR412C-AQ3E742 68 aa1.12□□□□□ -2.23
CDC36YDL165W YOS1Q3E834 85 aa1.12□□□□□ -2.23
CDC36YDL165W MLP2P40457 1679 aa1.12□□□□□ -2.23
CDC36YDL165W ARO1P08566 1588 aaKnown RBP1.12□□□□□ -2.23
CDC36YDL165W BPT1P14772 1559 aa1.12□□□□□ -2.23
CDC36YDL165W ATG2P53855 1592 aa1.12□□□□□ -2.23
CDC36YDL165W ECM12O13529 151 aa1.11□□□□□ -2.23
CDC36YDL165W ILV1P00927 576 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W STE7P06784 515 aa1.11□□□□□ -2.23
CDC36YDL165W CPA1P07258 411 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W MRS1P07266 363 aa1.11□□□□□ -2.23
CDC36YDL165W RIP1P08067 215 aa1.11□□□□□ -2.23
CDC36YDL165W YAR066WP0CX18 203 aa1.11□□□□□ -2.23
CDC36YDL165W YHR214WP0CX19 203 aa1.11□□□□□ -2.23
CDC36YDL165W HMRA1P0CY11 126 aa1.11□□□□□ -2.23
CDC36YDL165W YGL010WP25338 174 aa1.11□□□□□ -2.23
CDC36YDL165W PEX34P25584 144 aa1.11□□□□□ -2.23
CDC36YDL165W MRP17P28778 131 aa1.11□□□□□ -2.23
CDC36YDL165W OAC1P32332 324 aa1.11□□□□□ -2.23
CDC36YDL165W RIM1P32445 135 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W ERG24P32462 438 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W MKK1P32490 508 aa1.11□□□□□ -2.23
CDC36YDL165W IES6P32617 166 aa1.11□□□□□ -2.23
CDC36YDL165W VMA11P32842 164 aa1.11□□□□□ -2.23
CDC36YDL165W NTF2P33331 125 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W KTI12P34253 313 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W SOR1P35497 357 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W SFK1P35735 353 aa1.11□□□□□ -2.23
CDC36YDL165W MCR1P36060 302 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W YKR041WP36134 250 aa1.11□□□□□ -2.23
CDC36YDL165W YKR070WP36151 352 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W ECM33P38248 429 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W ATG12P38316 186 aa1.11□□□□□ -2.23
CDC36YDL165W PHO89P38361 574 aa1.11□□□□□ -2.23
CDC36YDL165W ECM14P38836 430 aa1.11□□□□□ -2.23
CDC36YDL165W HSP10P38910 106 aa1.11□□□□□ -2.23
CDC36YDL165W TEM1P38987 245 aa1.11□□□□□ -2.23
CDC36YDL165W LYS1P38998 373 aaRIP-Chip data1.11□□□□□ -2.23not detected
CDC36YDL165W NSA2P40078 261 aaKnown RBP1.11□□□□□ -2.23
CDC36YDL165W CYB5P40312 120 aa1.11□□□□□ -2.23
CDC36YDL165W PEP8P40335 379 aa1.11□□□□□ -2.23
CDC36YDL165W DLS1P40366 167 aa1.11□□□□□ -2.23
CDC36YDL165W VHS2P40463 436 aa1.11□□□□□ -2.23
CDC36YDL165W CWP2P43497 92 aa1.11□□□□□ -2.23
CDC36YDL165W YFL065CP43539 102 aa1.11□□□□□ -2.23
CDC36YDL165W NCA3P46955 337 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 88.7 ms