RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W SLX9P53251 210 aaPredicted RBP1.57□□□□□ -2.16
UBP1YDL122W COX12Q01519 83 aa1.57□□□□□ -2.16
UBP1YDL122W YDR102CQ03864 110 aa1.57□□□□□ -2.16
UBP1YDL122W YDR115WQ04598 105 aa1.57□□□□□ -2.16
UBP1YDL122W DXO1Q06349 442 aa1.57□□□□□ -2.16
UBP1YDL122W YCR025CP25352 136 aa1.57□□□□□ -2.16
UBP1YDL122W SPS18P32572 300 aa1.57□□□□□ -2.16
UBP1YDL122W CAF4P36130 643 aa1.57□□□□□ -2.16
UBP1YDL122W SRP14P38985 146 aa1.57□□□□□ -2.16
UBP1YDL122W RMD6P39975 231 aa1.57□□□□□ -2.16
UBP1YDL122W OST3P48439 350 aa1.57□□□□□ -2.16
UBP1YDL122W MMS2P53152 137 aa1.57□□□□□ -2.16
UBP1YDL122W FMP48P53233 369 aa1.57□□□□□ -2.16
UBP1YDL122W FMP41P53889 259 aaKnown RBP1.57□□□□□ -2.16
UBP1YDL122W MRX11Q03079 207 aa1.57□□□□□ -2.16
UBP1YDL122W GPI17Q04080 534 aa1.57□□□□□ -2.16
UBP1YDL122W RFU1Q08003 200 aa1.57□□□□□ -2.16
UBP1YDL122W YMR030W-AQ3E760 96 aa1.57□□□□□ -2.16
UBP1YDL122W PHO80P20052 293 aa1.56□□□□□ -2.16
UBP1YDL122W CDC50P25656 391 aa1.56□□□□□ -2.16
UBP1YDL122W SHG1P38337 142 aa1.56□□□□□ -2.16
UBP1YDL122W YJL218WP40892 196 aaKnown RBP1.56□□□□□ -2.16
UBP1YDL122W TOS8P53147 276 aa1.56□□□□□ -2.16
UBP1YDL122W YIP3P53633 176 aa1.56□□□□□ -2.16
UBP1YDL122W PDR17P53844 350 aa1.56□□□□□ -2.16
UBP1YDL122W SLM2P53955 656 aa1.56□□□□□ -2.16
UBP1YDL122W RPL21AQ02753 160 aaKnown RBP1.56□□□□□ -2.16
UBP1YDL122W YDR124WQ04608 324 aa1.56□□□□□ -2.16
UBP1YDL122W LIP2Q06005 328 aa1.56□□□□□ -2.16
UBP1YDL122W YPL247CQ12523 523 aa1.56□□□□□ -2.16
UBP1YDL122W YBR298C-AQ8TGK4 73 aa1.56□□□□□ -2.16
UBP1YDL122W PHO13P19881 312 aa1.56□□□□□ -2.16
UBP1YDL122W POP8P38208 133 aa1.56□□□□□ -2.16
UBP1YDL122W ECM33P38248 429 aaKnown RBP1.56□□□□□ -2.16
UBP1YDL122W PHO89P38361 574 aa1.56□□□□□ -2.16
UBP1YDL122W MIG3P39943 394 aa1.56□□□□□ -2.16
UBP1YDL122W RFC2P40348 353 aa1.56□□□□□ -2.16
UBP1YDL122W MRPL49P40858 161 aaPredicted RBP1.56□□□□□ -2.16
UBP1YDL122W MRH4P53166 561 aa1.56□□□□□ -2.16
UBP1YDL122W ATG39Q06159 398 aa1.56□□□□□ -2.16
UBP1YDL122W YPR127WQ06494 345 aa1.56□□□□□ -2.16
UBP1YDL122W YNG1Q08465 219 aa1.56□□□□□ -2.16
UBP1YDL122W CDC28P00546 298 aaKnown RBP1.55□□□□□ -2.16
UBP1YDL122W QCR2P07257 368 aa1.55□□□□□ -2.16
UBP1YDL122W IGD1P43598 195 aa1.55□□□□□ -2.16
UBP1YDL122W YJR056CP47115 236 aa1.55□□□□□ -2.16
UBP1YDL122W BXI1P48558 297 aa1.55□□□□□ -2.16
UBP1YDL122W AAH1P53909 347 aa1.55□□□□□ -2.16
UBP1YDL122W SNO1Q03144 224 aa1.55□□□□□ -2.16
UBP1YDL122W CSN9Q03981 162 aa1.55□□□□□ -2.16
UBP1YDL122W RRP17Q04031 235 aaPredicted RBP1.55□□□□□ -2.16
UBP1YDL122W LCL2Q08045 131 aa1.55□□□□□ -2.16
UBP1YDL122W TRM10Q12400 293 aa1.55□□□□□ -2.16
UBP1YDL122W YPL229WQ99395 206 aa1.55□□□□□ -2.16
UBP1YDL122W PUT1P09368 476 aa1.55□□□□□ -2.16
UBP1YDL122W GCN3P14741 305 aa1.55□□□□□ -2.16
UBP1YDL122W ANB1P19211 157 aa1.55□□□□□ -2.16
UBP1YDL122W TRR1P29509 319 aaKnown RBP1.55□□□□□ -2.16
UBP1YDL122W TIM12P32830 109 aa1.55□□□□□ -2.16
UBP1YDL122W SRY1P36007 326 aa1.55□□□□□ -2.16
UBP1YDL122W NRG2P38082 220 aa1.55□□□□□ -2.16
UBP1YDL122W AME1P38313 324 aa1.55□□□□□ -2.16
UBP1YDL122W PIR5P46999 287 aa1.55□□□□□ -2.16
UBP1YDL122W SYC1Q08553 188 aaPredicted RBP1.55□□□□□ -2.16
UBP1YDL122W YOR186WQ08560 144 aa1.55□□□□□ -2.16
UBP1YDL122W YOL163WP0CF20 169 aa1.54□□□□□ -2.16
UBP1YDL122W ERG2P32352 222 aa1.54□□□□□ -2.16
UBP1YDL122W MRPL28P36527 147 aa1.54□□□□□ -2.16
UBP1YDL122W AVT6P40074 448 aa1.54□□□□□ -2.16
UBP1YDL122W YKE4P40544 346 aa1.54□□□□□ -2.16
UBP1YDL122W TMA22P47089 198 aaPredicted RBP1.54□□□□□ -2.16
UBP1YDL122W YGL235WP53071 178 aa1.54□□□□□ -2.16
UBP1YDL122W YGR018CP53211 109 aa1.54□□□□□ -2.16
UBP1YDL122W HAL1Q01766 294 aa1.54□□□□□ -2.16
UBP1YDL122W MIX17Q03667 156 aa1.54□□□□□ -2.16
UBP1YDL122W YMR244WQ04018 355 aa1.54□□□□□ -2.16
UBP1YDL122W YAL063C-AQ3E791 96 aa1.54□□□□□ -2.16
UBP1YDL122W YBL008W-AQ3E821 79 aa1.54□□□□□ -2.16
UBP1YDL122W OAC1P32332 324 aa1.54□□□□□ -2.16
UBP1YDL122W SSH1P38353 490 aaKnown RBP1.54□□□□□ -2.16
UBP1YDL122W KRE9P39005 276 aa1.54□□□□□ -2.16
UBP1YDL122W EDC2P40023 145 aaPredicted RBP1.54□□□□□ -2.16
UBP1YDL122W GON7P46984 123 aa1.54□□□□□ -2.16
UBP1YDL122W SNX4P47057 423 aa1.54□□□□□ -2.16
UBP1YDL122W YGR017WP53210 297 aa1.54□□□□□ -2.16
UBP1YDL122W SWT21P53873 357 aaPredicted RBP1.54□□□□□ -2.16
UBP1YDL122W NRK1P53915 240 aa1.54□□□□□ -2.16
UBP1YDL122W NOC4Q06512 552 aaPredicted RBP1.54□□□□□ -2.16
UBP1YDL122W DFM1Q12743 341 aaKnown RBP1.54□□□□□ -2.16
UBP1YDL122W ACP1P32463 125 aa1.53□□□□□ -2.16
UBP1YDL122W APS1P35181 156 aa1.53□□□□□ -2.16
UBP1YDL122W PEX17P40155 199 aa1.53□□□□□ -2.16
UBP1YDL122W RRG9P40156 214 aa1.53□□□□□ -2.16
UBP1YDL122W FAR7P43592 221 aa1.53□□□□□ -2.16
UBP1YDL122W ILM1P47155 203 aa1.53□□□□□ -2.16
UBP1YDL122W YGL118CP53132 145 aa1.53□□□□□ -2.16
UBP1YDL122W YNL010WP53981 241 aaKnown RBP1.53□□□□□ -2.16
UBP1YDL122W TIR4Q12218 487 aaPredicted RBP1.53□□□□□ -2.16
UBP1YDL122W AGC1Q12482 902 aa1.53□□□□□ -2.16
UBP1YDL122W YGL262WP53054 175 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms