RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C ERV15P38312 142 aa1.15□□□□□ -2.23
ASM4YDL088C NSA2P40078 261 aaKnown RBP1.15□□□□□ -2.23
ASM4YDL088C CUP9P41817 306 aa1.15□□□□□ -2.23
ASM4YDL088C ERJ5P43613 295 aaPredicted RBP1.15□□□□□ -2.23
ASM4YDL088C BOL2P53082 120 aa1.15□□□□□ -2.23
ASM4YDL088C HHT1P61830 136 aa1.15□□□□□ -2.23
ASM4YDL088C GRX5Q02784 150 aa1.15□□□□□ -2.23
ASM4YDL088C CSN9Q03981 162 aa1.15□□□□□ -2.23
ASM4YDL088C THI74Q04083 370 aa1.15□□□□□ -2.23
ASM4YDL088C ATO3Q12359 275 aa1.15□□□□□ -2.23
ASM4YDL088C POR1P04840 283 aaKnown RBP1.14□□□□□ -2.23
ASM4YDL088C ATP5P09457 212 aa1.14□□□□□ -2.23
ASM4YDL088C RPL2AP0CX45 254 aaKnown RBP1.14□□□□□ -2.23
ASM4YDL088C RPL2BP0CX46 254 aaKnown RBP1.14□□□□□ -2.23
ASM4YDL088C TIR1P10863 254 aa1.14□□□□□ -2.23
ASM4YDL088C PEX34P25584 144 aa1.14□□□□□ -2.23
ASM4YDL088C YBR209WP38311 105 aa1.14□□□□□ -2.23
ASM4YDL088C FYV4P38783 130 aaPredicted RBP1.14□□□□□ -2.23
ASM4YDL088C YPL073CP40323 161 aa1.14□□□□□ -2.23
ASM4YDL088C CCC1P47818 322 aa1.14□□□□□ -2.23
ASM4YDL088C SOL1P50278 321 aa1.14□□□□□ -2.23
ASM4YDL088C YGL204CP53089 101 aa1.14□□□□□ -2.23
ASM4YDL088C MPC3P53311 146 aa1.14□□□□□ -2.23
ASM4YDL088C YNR062CP53748 327 aa1.14□□□□□ -2.23
ASM4YDL088C YKR005CQ02203 525 aa1.14□□□□□ -2.23
ASM4YDL088C VPS28Q02767 242 aa1.14□□□□□ -2.23
ASM4YDL088C SHH3Q04487 196 aa1.14□□□□□ -2.23
ASM4YDL088C YPR202WQ08993 238 aa1.14□□□□□ -2.23
ASM4YDL088C ATP14Q12349 124 aa1.14□□□□□ -2.23
ASM4YDL088C FKS1P38631 1876 aaKnown RBP1.13□□□□□ -2.23
ASM4YDL088C NSP1P14907 823 aaKnown RBP1.13□□□□□ -2.23
ASM4YDL088C SCL1P21243 252 aaKnown RBP1.13□□□□□ -2.23
ASM4YDL088C HSP30P25619 332 aa1.13□□□□□ -2.23
ASM4YDL088C TFC1P32367 649 aa1.13□□□□□ -2.23
ASM4YDL088C YNL217WP40152 326 aa1.13□□□□□ -2.23
ASM4YDL088C EAF6P47128 113 aa1.13□□□□□ -2.23
ASM4YDL088C ERG25P53045 309 aa1.13□□□□□ -2.23
ASM4YDL088C ORM1P53224 222 aa1.13□□□□□ -2.23
ASM4YDL088C YNR077CP53758 84 aa1.13□□□□□ -2.23
ASM4YDL088C YMR099CQ03161 297 aaKnown RBP1.13□□□□□ -2.23
ASM4YDL088C CUE4Q04201 117 aaPredicted RBP1.13□□□□□ -2.23
ASM4YDL088C SYM1Q06563 197 aa1.13□□□□□ -2.23
ASM4YDL088C ATP20Q12233 115 aa1.13□□□□□ -2.23
ASM4YDL088C TRM3Q07527 1436 aa1.13□□□□□ -2.23
ASM4YDL088C YLR236CA0A023PZG4 107 aa1.13□□□□□ -2.23
ASM4YDL088C DDI2P0CH63 225 aa1.13□□□□□ -2.23
ASM4YDL088C DDI3P0CH64 225 aa1.13□□□□□ -2.23
ASM4YDL088C FZF1P32805 299 aa1.13□□□□□ -2.23
ASM4YDL088C YRA2P36036 203 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
ASM4YDL088C CYC2P38909 366 aa1.13□□□□□ -2.23
ASM4YDL088C SPC25P40014 221 aa1.13□□□□□ -2.23
ASM4YDL088C YER181CP40097 107 aa1.13□□□□□ -2.23
ASM4YDL088C PHB1P40961 287 aa1.13□□□□□ -2.23
ASM4YDL088C YGR201CP42936 225 aa1.13□□□□□ -2.23
ASM4YDL088C YJR015WP47090 510 aa1.13□□□□□ -2.23
ASM4YDL088C YDR366CP87287 132 aa1.13□□□□□ -2.23
ASM4YDL088C HRD1Q08109 551 aa1.13□□□□□ -2.23
ASM4YDL088C YOR015WQ12169 119 aa1.13□□□□□ -2.23
ASM4YDL088C RAD6P06104 172 aa1.12□□□□□ -2.23
ASM4YDL088C SEC11P15367 167 aa1.12□□□□□ -2.23
ASM4YDL088C SUA7P29055 345 aaPredicted RBP1.12□□□□□ -2.23
ASM4YDL088C PTC1P35182 281 aa1.12□□□□□ -2.23
ASM4YDL088C RRT1P38192 103 aa1.12□□□□□ -2.23
ASM4YDL088C CSH1P38287 376 aa1.12□□□□□ -2.23
ASM4YDL088C YBR220CP38318 560 aa1.12□□□□□ -2.23
ASM4YDL088C GAA1P39012 614 aa1.12□□□□□ -2.23
ASM4YDL088C FIP1P45976 327 aa1.12□□□□□ -2.23
ASM4YDL088C SAY1P53324 424 aa1.12□□□□□ -2.23
ASM4YDL088C YNL033WP53964 284 aa1.12□□□□□ -2.23
ASM4YDL088C DIG2Q03373 323 aaKnown RBP1.12□□□□□ -2.23
ASM4YDL088C YDR391CQ04170 232 aa1.12□□□□□ -2.23
ASM4YDL088C GAL83Q04739 417 aa1.12□□□□□ -2.23
ASM4YDL088C YMR253CQ04835 414 aa1.12□□□□□ -2.23
ASM4YDL088C ANT1Q06497 328 aa1.12□□□□□ -2.23
ASM4YDL088C IRC23Q08416 157 aa1.12□□□□□ -2.23
ASM4YDL088C MET5P47169 1442 aa1.12□□□□□ -2.23
ASM4YDL088C TMA19P35691 167 aaKnown RBP1.11□□□□□ -2.23
ASM4YDL088C SFK1P35735 353 aa1.11□□□□□ -2.23
ASM4YDL088C PAM17P36147 197 aa1.11□□□□□ -2.23
ASM4YDL088C YHR022CP38763 256 aa1.11□□□□□ -2.23
ASM4YDL088C DSE2P38844 325 aa1.11□□□□□ -2.23
ASM4YDL088C YEL073CP39974 107 aa1.11□□□□□ -2.23
ASM4YDL088C PAC10P48363 199 aa1.11□□□□□ -2.23
ASM4YDL088C YGR039WP53225 103 aa1.11□□□□□ -2.23
ASM4YDL088C HHO1P53551 258 aa1.11□□□□□ -2.23
ASM4YDL088C POP3P53833 195 aaPredicted RBP1.11□□□□□ -2.23
ASM4YDL088C DAD4P69851 72 aa1.11□□□□□ -2.23
ASM4YDL088C DYN2Q02647 92 aa1.11□□□□□ -2.23
ASM4YDL088C COF1Q03048 143 aaKnown RBP1.11□□□□□ -2.23
ASM4YDL088C DML1Q03652 475 aa1.11□□□□□ -2.23
ASM4YDL088C YDR102CQ03864 110 aa1.11□□□□□ -2.23
ASM4YDL088C PST2Q12335 198 aaKnown RBP1.11□□□□□ -2.23
ASM4YDL088C YOR381W-AQ3E804 55 aa1.11□□□□□ -2.23
ASM4YDL088C PHO13P19881 312 aa1.1□□□□□ -2.23
ASM4YDL088C MAK31P23059 88 aa1.1□□□□□ -2.23
ASM4YDL088C RIO2P40160 425 aaKnown RBP1.1□□□□□ -2.23
ASM4YDL088C AGE2P40529 298 aa1.1□□□□□ -2.23
ASM4YDL088C CIN5P40917 295 aa1.1□□□□□ -2.23
ASM4YDL088C APS3P47064 194 aa1.1□□□□□ -2.23
ASM4YDL088C SBH1P52870 82 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms