RNA–Protein interactions for RNA: ENST00000639851.1

KCNMA1-272, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best)

Gene KCNMA1, Length 3,866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-272ENST00000639851 VPS36Q86VN1 386 aa7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 CCDC50Q8IVM0 306 aa7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 PAF1Q8N7H5 531 aa7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 TRIM43Q96BQ3 446 aaPredicted RBP7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 KIF12Q96FN5 646 aa7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 VCPIP1Q96JH7 1222 aa7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 SUSD3Q96L08 255 aa7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 CASD1Q96PB1 797 aa7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 NXF3Q9H4D5 531 aaKnown RBP7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 PDE11AQ9HCR9 933 aa7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 SNTG2Q9NY99 539 aa7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 NXF1Q9UBU9 619 aaKnown RBP7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 MRPL42Q9Y6G3 142 aaKnown RBP7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 MKI67P46013 3256 aaKnown RBP7.52□□□□□ -1.2
KCNMA1-272ENST00000639851 PIK3R2O00459 728 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 DGKIO75912 1065 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 ACO1P21399 889 aaKnown RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 RPL34P49207 117 aaKnown RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 HADHBP55084 474 aaKnown RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 SNX16P57768 344 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 MAPRE1Q15691 268 aaKnown RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 UPP1Q16831 310 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 ZNF699Q32M78 642 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 ZNF667Q5HYK9 610 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 SFMBT2Q5VUG0 894 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 RTN4RL1Q86UN2 441 aaPredicted RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 COLGALT2Q8IYK4 626 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 CCDC42Q96M95 316 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 HERC2P3Q9BVR0 1158 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 COLEC11Q9BWP8 271 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 LHX5Q9H2C1 402 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 PNPLA8Q9NP80 782 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 AAASQ9NRG9 546 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 ATP11BQ9Y2G3 1177 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 PTPRDP23468 1912 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 C5orf67F2Z3F1 127 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 GABRDO14764 452 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 MED7O43513 233 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 TADA3O75528 432 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 NFICP08651 508 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 CD19P15391 556 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 RAG1P15918 1043 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 ASPAP45381 313 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 C2CD6Q53TS8 623 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 ZNF569Q5MCW4 686 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 EP400NLQ6ZTU2 488 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 STK32AQ8WU08 396 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 CLP1Q92989 425 aaKnown RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 GPR88Q9GZN0 384 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 ST7Q9NRC1 585 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 MYO1AQ9UBC5 1043 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 A0A0A6YYK5 440 aaPredicted RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 EIF3CLB5ME19 914 aaKnown RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 ERBB2P04626 1255 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 RB1P06400 928 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 MYBL1P10243 752 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 CXCR5P32302 372 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 GCLMP48507 274 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 DLG4P78352 724 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 TFAMQ00059 246 aaKnown RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 ARCQ7LC44 396 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 CRYBG2Q8N1P7 616 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 TAS1R2Q8TE23 839 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 HNRNPLLQ8WVV9 542 aaKnown RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 EIF3CQ99613 913 aaKnown RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 TSGA10Q9BZW7 698 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 LMAN2LQ9H0V9 348 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 ABCB6Q9NP58 842 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 HYOU1Q9Y4L1 999 aa7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 LAMA2P24043 3122 aaKnown RBP7.52□□□□□ -1.21
KCNMA1-272ENST00000639851 NCANO14594 1321 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 PTPRJQ12913 1337 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 SYNJ2BP-COX16A0A087WUM0 186 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 SOWAHDA6NJG2 315 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 SLU7O95391 586 aaKnown RBP7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 ODC1P11926 461 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 CYLC1P35663 651 aaPredicted RBP7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 SF3A3Q12874 501 aaKnown RBP eCLIP7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 ASTE1Q2TB18 679 aaPredicted RBP7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 ZBTB41Q5SVQ8 909 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 IQCEQ6IPM2 695 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 ACRBPQ8NEB7 543 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 DBF4BQ8NFT6 615 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 PKNOX2Q96KN3 472 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 MMS19Q96T76 1030 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 BAG1Q99933 345 aaPredicted RBP7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 RHOBTB2Q9BYZ6 727 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 COX16Q9P0S2 106 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 LRFN2Q9ULH4 789 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 BARX2Q9UMQ3 279 aaPredicted RBP7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 PLXNA3P51805 1871 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 PJA2O43164 708 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 WDR5P61964 334 aaKnown RBP7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 PLCB3Q01970 1234 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 ASIC2Q16515 512 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 APPL2Q8NEU8 664 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 OR5B17Q8NGF7 314 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 HDAC7Q8WUI4 952 aa7.51□□□□□ -1.21
KCNMA1-272ENST00000639851 HPDLQ96IR7 371 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms