RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 FAM81BQ96LP2 452 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 RPS6KC1Q96S38 1066 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 FTHL17Q9BXU8 183 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 IMPG2Q9BZV3 1241 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 ACP6Q9NPH0 428 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 KCND1Q9NSA2 647 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 NXF1Q9UBU9 619 aaKnown RBP8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 NOCTQ9UK39 431 aaKnown RBP8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 NENFQ9UMX5 172 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 CNTN6Q9UQ52 1028 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 EPN1Q9Y6I3 576 aaPredicted RBP8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 TRIOBPQ9H2D6 2365 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 KIAA1671Q9BY89 1806 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 A0A087X0T9 212 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 EIF3CLB5ME19 914 aaKnown RBP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 DDX3XO00571 662 aaKnown RBP eCLIP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 XPOTO43592 962 aaKnown RBP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 B4GALT3O60512 393 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 LCA5LO95447 670 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 EOMESO95936 686 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 THP07101 528 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 WEE2P0C1S8 567 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 FAM228BP0C875 321 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 CHRNB2P17787 502 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 CYLC1P35663 651 aaPredicted RBP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 USP8P40818 1118 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 GATMP50440 423 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF132P52740 706 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 CDH8P55286 799 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 WDR72Q3MJ13 1102 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 NOP9Q86U38 636 aaKnown RBP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 SLC47A2Q86VL8 602 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 SCUBE3Q8IX30 993 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 CCDC170Q8IYT3 715 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 RBBP8NLQ8NC74 664 aaPredicted RBP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 SLC30A5Q8TAD4 765 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 DDX1Q92499 740 aaKnown RBP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 JAKMIP2Q96AA8 810 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 PGBD4Q96DM1 585 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 FAXDC2Q96IV6 333 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 PPP1R13BQ96KQ4 1090 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 EIF3CQ99613 913 aaKnown RBP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 PAAF1Q9BRP4 392 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 ELAC1Q9H777 363 aaKnown RBP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 SLC24A3Q9HC58 644 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 PRDM5Q9NQX1 630 aaPredicted RBP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 CISHQ9NSE2 258 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 TRMT1Q9NXH9 659 aaKnown RBP8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 HMGXB4Q9UGU5 601 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 INPP5FQ9Y2H2 1132 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 PPP2R2CQ9Y2T4 447 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 NME7Q9Y5B8 376 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 PCDHB4Q9Y5E5 795 aa8.66□□□□□ -1.02
DEPDC4-207ENST00000549249 CASTOR2A6NHX0 329 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 TRIM66O15016 1216 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF500O60304 480 aaPredicted RBP8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 CLSTN1O94985 981 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 ABL1P00519 1130 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 TIMP1P01033 207 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 POMCP01189 267 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 MMEP08473 750 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 KRT5P13647 590 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 CSF2RAP15509 400 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 CD58P19256 250 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 MSNP26038 577 aaKnown RBP8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 RFC2P35250 354 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 ARHGAP25P42331 645 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 FMO1Q01740 532 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 CYP27A1Q02318 531 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 GFPT1Q06210 699 aaPredicted RBP8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 GRIK3Q13003 919 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 SLC18A3Q16572 532 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 CNKSR3Q6P9H4 555 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 TMEM270Q6UE05 265 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 CD300LGQ6UXG3 332 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 LIMS2Q7Z4I7 341 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 DNAAF5Q86Y56 855 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 PALB2Q86YC2 1186 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 FMNL3Q8IVF7 1028 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 C3orf58Q8NDZ4 430 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 WHAMMQ8TF30 809 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 RABGGTAQ92696 567 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 CCDC42Q96M95 316 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF560Q96MR9 790 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 TWNKQ96RR1 684 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 ZSWIM1Q9BR11 485 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 UBN1Q9NPG3 1134 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 RRAGDQ9NQL2 400 aaPredicted RBP8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 SLC38A7Q9NVC3 462 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 TMEM161AQ9NX61 479 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 TFR2Q9UP52 801 aa8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 BZW2Q9Y6E2 419 aaKnown RBP8.65□□□□□ -1.02
DEPDC4-207ENST00000549249 MKI67P46013 3256 aaKnown RBP8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 PODXLO00592 558 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 AKR1B10O60218 316 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 CILPO75339 1184 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 DDHD2O94830 711 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 ADH1BP00325 375 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 CCDC175P0C221 793 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms