RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 HEXIM2Q96MH2 286 aaKnown RBP18.47■□□□□ 0.55
CLDN4-201ENST00000340958 DNAI2Q9GZS0 605 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 THAP2Q9H0W7 228 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 TBX21Q9UL17 535 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 HUS1O60921 280 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 CILPO75339 1184 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 PAEPP09466 180 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 LRPAP1P30533 357 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 MAGEA10P43363 369 aaPredicted RBP18.46■□□□□ 0.55
CLDN4-201ENST00000340958 AFF1P51825 1210 aaKnown RBP18.46■□□□□ 0.55
CLDN4-201ENST00000340958 GPC5P78333 572 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 NAA35Q5VZE5 725 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 SMYD5Q6GMV2 418 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 CHRDL2Q6WN34 429 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 GSTCDQ8NEC7 633 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 APPL2Q8NEU8 664 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 OR6B3Q8NGW1 331 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 CPA5Q8WXQ8 436 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 APBB2Q92870 758 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 ISCUQ9H1K1 167 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 SNX25Q9H3E2 840 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 FAM124BQ9H5Z6 455 aaPredicted RBP18.46■□□□□ 0.55
CLDN4-201ENST00000340958 MIOSQ9NXC5 875 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 ATP8B3O60423 1300 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 CASTOR2A6NHX0 329 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 BTNL10A8MVZ5 291 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 C9IYK1 514 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 PODXLO00592 558 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 KIAA0355O15063 1070 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 PARNO95453 639 aaKnown RBP18.46■□□□□ 0.55
CLDN4-201ENST00000340958 NDST1P52848 882 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 RTN4RL1Q86UN2 441 aaPredicted RBP18.46■□□□□ 0.55
CLDN4-201ENST00000340958 URGCPQ8TCY9 931 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 CYFIP2Q96F07 1278 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 NT5C1AQ9BXI3 368 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 LRFN2Q9ULH4 789 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 CAPN6Q9Y6Q1 641 aa18.46■□□□□ 0.55
CLDN4-201ENST00000340958 LAMA3Q16787 3333 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 CLCNKBP51801 687 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 RAD23BP54727 409 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 LILRA4P59901 499 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 GRIK3Q13003 919 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 PLEKHG4Q58EX7 1191 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 DEFB128Q7Z7B8 93 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 ABI1Q8IZP0 508 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 ZNF653Q96CK0 615 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 MRPL45Q9BRJ2 306 aaKnown RBP18.45■□□□□ 0.54
CLDN4-201ENST00000340958 CTTNBP2NLQ9P2B4 639 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 HMGXB4Q9UGU5 601 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 SALL4Q9UJQ4 1053 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 PCDHB7Q9Y5E2 793 aa18.45■□□□□ 0.54
CLDN4-201ENST00000340958 A0A0A6YYK5 440 aaPredicted RBP18.44■□□□□ 0.54
CLDN4-201ENST00000340958 PALMO75781 387 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 RPL9P32969 192 aaKnown RBP18.44■□□□□ 0.54
CLDN4-201ENST00000340958 CYP2C18P33260 490 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 INCA1Q0VD86 236 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 PPP1R2P3Q6NXS1 205 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 ZNF598Q86UK7 904 aaKnown RBP18.44■□□□□ 0.54
CLDN4-201ENST00000340958 SLC35G2Q8TBE7 412 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 RFFLQ8WZ73 363 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 TRIM11Q96F44 468 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 GDF15Q99988 308 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 ELOVL4Q9GZR5 314 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 COLQQ9Y215 455 aaPredicted RBP18.44■□□□□ 0.54
CLDN4-201ENST00000340958 TRIOBPQ9H2D6 2365 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 A8MXQ7 604 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 ENC1O14682 589 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 SPTLC1O15269 473 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 RAG1P15918 1043 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 RNASELQ05823 741 aaKnown RBP18.44■□□□□ 0.54
CLDN4-201ENST00000340958 SOWAHAQ2M3V2 549 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 SGO2Q562F6 1265 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 DSTYKQ6XUX3 929 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 RHOT2Q8IXI1 618 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 SLC4A11Q8NBS3 891 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 TMEM35BQ8NCS4 154 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 WHAMMQ8TF30 809 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 BADQ92934 168 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 DDX27Q96GQ7 796 aaKnown RBP18.44■□□□□ 0.54
CLDN4-201ENST00000340958 TWNKQ96RR1 684 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 GDAP2Q9NXN4 497 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 CACNG4Q9UBN1 327 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 JRKLQ9Y4A0 524 aa18.44■□□□□ 0.54
CLDN4-201ENST00000340958 LAMA2P24043 3122 aaKnown RBP18.43■□□□□ 0.54
CLDN4-201ENST00000340958 CYB561D2O14569 222 aa18.43■□□□□ 0.54
CLDN4-201ENST00000340958 ENPP3O14638 875 aa18.43■□□□□ 0.54
CLDN4-201ENST00000340958 LSM8O95777 96 aaKnown RBP18.43■□□□□ 0.54
CLDN4-201ENST00000340958 CYP1A1P04798 512 aaPredicted RBP18.43■□□□□ 0.54
CLDN4-201ENST00000340958 CFHP08603 1231 aa18.43■□□□□ 0.54
CLDN4-201ENST00000340958 VDRP11473 427 aa18.43■□□□□ 0.54
CLDN4-201ENST00000340958 UNGP13051 313 aaPredicted RBP18.43■□□□□ 0.54
CLDN4-201ENST00000340958 GNL1P36915 607 aaPredicted RBP18.43■□□□□ 0.54
CLDN4-201ENST00000340958 LIN9Q5TKA1 542 aa18.43■□□□□ 0.54
CLDN4-201ENST00000340958 LINC01599Q8WXQ3 324 aa18.43■□□□□ 0.54
CLDN4-201ENST00000340958 TFAP2BQ92481 460 aa18.43■□□□□ 0.54
CLDN4-201ENST00000340958 RABGGTAQ92696 567 aa18.43■□□□□ 0.54
CLDN4-201ENST00000340958 FAM193BQ96PV7 902 aaPredicted RBP18.43■□□□□ 0.54
CLDN4-201ENST00000340958 LBHD1Q9BQE6 289 aaPredicted RBP18.43■□□□□ 0.54
CLDN4-201ENST00000340958 PRO3102Q9H379 93 aa18.43■□□□□ 0.54
CLDN4-201ENST00000340958 TMEM161AQ9NX61 479 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms