RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 BOL1Q3E793 110 aa1.91□□□□□ -2.1
snR43snR43 YLR365WQ7LIF2 110 aa1.91□□□□□ -2.1
snR43snR43 TAR1Q8TGM6 124 aa1.91□□□□□ -2.1
snR43snR43 VPS63O13549 108 aa1.9□□□□□ -2.11
snR43snR43 HTB1P02293 131 aaKnown RBP1.9□□□□□ -2.11
snR43snR43 CDC31P06704 161 aaKnown RBP1.9□□□□□ -2.11
snR43snR43 YLL053CP0CD98 152 aa1.9□□□□□ -2.11
snR43snR43 MRP2P10663 115 aaPredicted RBP1.9□□□□□ -2.11
snR43snR43 RPL3P14126 387 aaKnown RBP1.9□□□□□ -2.11
snR43snR43 YCR043CP25361 127 aa1.9□□□□□ -2.11
snR43snR43 YBL010CP32788 280 aa1.9□□□□□ -2.11
snR43snR43 MRPL38P35996 138 aaPredicted RBP1.9□□□□□ -2.11
snR43snR43 MED8P38304 223 aa1.9□□□□□ -2.11
snR43snR43 EGD2P38879 174 aaKnown RBP1.9□□□□□ -2.11
snR43snR43 NVJ1P38881 321 aa1.9□□□□□ -2.11
snR43snR43 SSO2P39926 295 aa1.9□□□□□ -2.11
snR43snR43 AGX1P43567 385 aa1.9□□□□□ -2.11
snR43snR43 DOC1P53068 250 aa1.9□□□□□ -2.11
snR43snR43 FMP48P53233 369 aa1.9□□□□□ -2.11
snR43snR43 BUD25P85052 153 aa1.9□□□□□ -2.11
snR43snR43 COX12Q01519 83 aa1.9□□□□□ -2.11
snR43snR43 CAB5Q03941 241 aa1.9□□□□□ -2.11
snR43snR43 ATX2Q12067 313 aa1.9□□□□□ -2.11
snR43snR43 TRM10Q12400 293 aa1.9□□□□□ -2.11
snR43snR43 YPR108W-AQ3E7B3 70 aa1.9□□□□□ -2.11
snR43snR43 GCN4P03069 281 aa1.89□□□□□ -2.11
snR43snR43 PET494P07390 489 aaPredicted RBP1.89□□□□□ -2.11
snR43snR43 YPS1P32329 569 aa1.89□□□□□ -2.11
snR43snR43 QDR3P38227 689 aa1.89□□□□□ -2.11
snR43snR43 GDT1P38301 280 aaPredicted RBP1.89□□□□□ -2.11
snR43snR43 POP2P39008 433 aa1.89□□□□□ -2.11
snR43snR43 YER137CP40083 148 aaKnown RBP1.89□□□□□ -2.11
snR43snR43 AIM20P40451 204 aa1.89□□□□□ -2.11
snR43snR43 YIL060WP40519 144 aa1.89□□□□□ -2.11
snR43snR43 YJL218WP40892 196 aaKnown RBP1.89□□□□□ -2.11
snR43snR43 LST8P41318 303 aa1.89□□□□□ -2.11
snR43snR43 YPI1P43587 155 aa1.89□□□□□ -2.11
snR43snR43 YAE1P47118 141 aaPredicted RBP1.89□□□□□ -2.11
snR43snR43 UBP8P50102 471 aa1.89□□□□□ -2.11
snR43snR43 ALG13P53178 202 aa1.89□□□□□ -2.11
snR43snR43 CAX4P53223 239 aa1.89□□□□□ -2.11
snR43snR43 SLX9P53251 210 aaPredicted RBP1.89□□□□□ -2.11
snR43snR43 CPD1P53314 239 aa1.89□□□□□ -2.11
snR43snR43 CWC25P53854 179 aaKnown RBP1.89□□□□□ -2.11
snR43snR43 CTF19Q02732 369 aa1.89□□□□□ -2.11
snR43snR43 YMR181CQ03231 154 aa1.89□□□□□ -2.11
snR43snR43 ATG39Q06159 398 aa1.89□□□□□ -2.11
snR43snR43 HRD1Q08109 551 aa1.89□□□□□ -2.11
snR43snR43 ERG27Q12452 347 aaKnown RBP1.89□□□□□ -2.11
snR43snR43 YLR099W-AQ3E798 87 aa1.89□□□□□ -2.11
snR43snR43 YEL009C-AA0A023PZF2 135 aa1.88□□□□□ -2.11
snR43snR43 SOD1P00445 154 aaKnown RBP1.88□□□□□ -2.11
snR43snR43 HIS3P06633 220 aa1.88□□□□□ -2.11
snR43snR43 NOP1P15646 327 aaKnown RBP1.88□□□□□ -2.11
snR43snR43 URA6P15700 204 aa1.88□□□□□ -2.11
snR43snR43 CDC23P16522 626 aa1.88□□□□□ -2.11
snR43snR43 RIB7P33312 244 aa1.88□□□□□ -2.11
snR43snR43 SHE2P36068 246 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
snR43snR43 YHR138CP38841 114 aaPredicted RBP1.88□□□□□ -2.11
snR43snR43 PCL7P40186 285 aa1.88□□□□□ -2.11
snR43snR43 GAT4P40569 121 aa1.88□□□□□ -2.11
snR43snR43 YJR011CP47086 261 aaPredicted RBP1.88□□□□□ -2.11
snR43snR43 TDA4P47153 279 aa1.88□□□□□ -2.11
snR43snR43 RCF1Q03713 159 aa1.88□□□□□ -2.11
snR43snR43 YMR130WQ04223 302 aa1.88□□□□□ -2.11
snR43snR43 POS5Q06892 414 aa1.88□□□□□ -2.11
snR43snR43 IRC23Q08416 157 aa1.88□□□□□ -2.11
snR43snR43 YNG1Q08465 219 aa1.88□□□□□ -2.11
snR43snR43 RAD28Q12021 506 aa1.88□□□□□ -2.11
snR43snR43 YPR013CQ12145 317 aa1.88□□□□□ -2.11
snR43snR43 DCP1Q12517 231 aaPredicted RBP1.88□□□□□ -2.11
snR43snR43 MED11Q99278 115 aa1.88□□□□□ -2.11
snR43snR43 ODC2Q99297 307 aa1.88□□□□□ -2.11
snR43snR43 CYC3P06182 269 aa1.87□□□□□ -2.11
snR43snR43 SEN2P16658 377 aa1.87□□□□□ -2.11
snR43snR43 ECM25P32525 599 aa1.87□□□□□ -2.11
snR43snR43 ATP3P38077 311 aaKnown RBP1.87□□□□□ -2.11
snR43snR43 YPT31P38555 223 aaKnown RBP1.87□□□□□ -2.11
snR43snR43 DOG2P38773 246 aa1.87□□□□□ -2.11
snR43snR43 DOG1P38774 246 aa1.87□□□□□ -2.11
snR43snR43 RTT105P40063 208 aa1.87□□□□□ -2.11
snR43snR43 MSS2P40990 351 aa1.87□□□□□ -2.11
snR43snR43 RPA34P47006 233 aaPredicted RBP1.87□□□□□ -2.11
snR43snR43 HAM1P47119 197 aaKnown RBP1.87□□□□□ -2.11
snR43snR43 VMA10P48836 114 aaKnown RBP1.87□□□□□ -2.11
snR43snR43 MIC26P50087 233 aa1.87□□□□□ -2.11
snR43snR43 VHT1P53241 593 aa1.87□□□□□ -2.11
snR43snR43 SWT21P53873 357 aaPredicted RBP1.87□□□□□ -2.11
snR43snR43 FYV6P53913 173 aa1.87□□□□□ -2.11
snR43snR43 ERV25P54837 211 aaKnown RBP1.87□□□□□ -2.11
snR43snR43 GRX3Q03835 250 aa1.87□□□□□ -2.11
snR43snR43 TSA2Q04120 196 aa1.87□□□□□ -2.11
snR43snR43 VBA1Q04301 562 aa1.87□□□□□ -2.11
snR43snR43 RRG8Q06109 277 aa1.87□□□□□ -2.11
snR43snR43 MRPL35Q06678 367 aa1.87□□□□□ -2.11
snR43snR43 TIR4Q12218 487 aaPredicted RBP1.87□□□□□ -2.11
snR43snR43 YJR112W-AQ3E743 109 aa1.87□□□□□ -2.11
snR43snR43 HUG1Q6Q5K6 68 aa1.87□□□□□ -2.11
snR43snR43 YBR085C-AO43137 85 aa1.86□□□□□ -2.11
snR43snR43 MIR1P23641 311 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms