RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W MRPS8Q03799 155 aa1.15□□□□□ -2.23
PKR1YMR123W CSN9Q03981 162 aa1.15□□□□□ -2.23
PKR1YMR123W HPT1Q04178 221 aaKnown RBP1.15□□□□□ -2.23
PKR1YMR123W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
PKR1YMR123W YOR032W-AQ8TGS1 66 aa1.15□□□□□ -2.23
PKR1YMR123W Q0297Q9ZZV8 51 aa1.15□□□□□ -2.23
PKR1YMR123W GPA2P10823 449 aa1.14□□□□□ -2.23
PKR1YMR123W TRX3P25372 127 aa1.14□□□□□ -2.23
PKR1YMR123W RAD51P25454 400 aa1.14□□□□□ -2.23
PKR1YMR123W MSN4P33749 630 aa1.14□□□□□ -2.23
PKR1YMR123W FZO1P38297 855 aa1.14□□□□□ -2.23
PKR1YMR123W AST2P39945 430 aaKnown RBP1.14□□□□□ -2.23
PKR1YMR123W YER034WP40022 185 aaKnown RBP1.14□□□□□ -2.23
PKR1YMR123W SOK1P40317 901 aa1.14□□□□□ -2.23
PKR1YMR123W BMT5P40493 336 aa1.14□□□□□ -2.23
PKR1YMR123W CAT5P41735 233 aa1.14□□□□□ -2.23
PKR1YMR123W PRM10P42946 383 aa1.14□□□□□ -2.23
PKR1YMR123W ALB1P47019 175 aaPredicted RBP1.14□□□□□ -2.23
PKR1YMR123W AIF1P52923 378 aa1.14□□□□□ -2.23
PKR1YMR123W EFM5P53200 248 aaKnown RBP1.14□□□□□ -2.23
PKR1YMR123W GTR2P53290 341 aa1.14□□□□□ -2.23
PKR1YMR123W MPA43P53583 542 aaPredicted RBP1.14□□□□□ -2.23
PKR1YMR123W YNL140CP53910 189 aa1.14□□□□□ -2.23
PKR1YMR123W MET31Q03081 177 aa1.14□□□□□ -2.23
PKR1YMR123W FAR8Q05040 523 aa1.14□□□□□ -2.23
PKR1YMR123W NIP7Q08962 181 aaKnown RBP1.14□□□□□ -2.23
PKR1YMR123W RUD3Q12234 484 aaKnown RBP1.14□□□□□ -2.23
PKR1YMR123W SNU23Q12368 194 aaPredicted RBP1.14□□□□□ -2.23
PKR1YMR123W YMR030W-AQ3E760 96 aa1.14□□□□□ -2.23
PKR1YMR123W YCL012CQ8J0M4 134 aa1.14□□□□□ -2.23
PKR1YMR123W STT4P37297 1900 aa1.14□□□□□ -2.23
PKR1YMR123W CCW14O13547 238 aa1.13□□□□□ -2.23
PKR1YMR123W RHO1P06780 209 aaKnown RBP1.13□□□□□ -2.23
PKR1YMR123W YOL162WP0CF19 215 aa1.13□□□□□ -2.23
PKR1YMR123W YHR214C-DP0CX93 97 aa1.13□□□□□ -2.23
PKR1YMR123W GCY1P14065 312 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
PKR1YMR123W CBF1P17106 351 aa1.13□□□□□ -2.23
PKR1YMR123W MDH2P22133 377 aa1.13□□□□□ -2.23
PKR1YMR123W YCR016WP25617 290 aaKnown RBP1.13□□□□□ -2.23
PKR1YMR123W YCR090CP25654 182 aaKnown RBP1.13□□□□□ -2.23
PKR1YMR123W HSP150P32478 413 aa1.13□□□□□ -2.23
PKR1YMR123W NTF2P33331 125 aaKnown RBP1.13□□□□□ -2.23
PKR1YMR123W SRY1P36007 326 aa1.13□□□□□ -2.23
PKR1YMR123W VPS21P36017 210 aaKnown RBP1.13□□□□□ -2.23
PKR1YMR123W PRS3P38689 320 aaKnown RBP1.13□□□□□ -2.23
PKR1YMR123W PEX17P40155 199 aa1.13□□□□□ -2.23
PKR1YMR123W YMR144WP40214 342 aaKnown RBP1.13□□□□□ -2.23
PKR1YMR123W YIL001WP40560 513 aa1.13□□□□□ -2.23
PKR1YMR123W FMP32P43557 207 aa1.13□□□□□ -2.23
PKR1YMR123W APS3P47064 194 aa1.13□□□□□ -2.23
PKR1YMR123W YLR460CP54007 376 aa1.13□□□□□ -2.23
PKR1YMR123W ATO3Q12359 275 aa1.13□□□□□ -2.23
PKR1YMR123W DCN1Q12395 269 aa1.13□□□□□ -2.23
PKR1YMR123W PSF1Q12488 208 aa1.13□□□□□ -2.23
PKR1YMR123W UBR1P19812 1950 aa1.13□□□□□ -2.23
PKR1YMR123W CDC36P06100 191 aaPredicted RBP1.12□□□□□ -2.23
PKR1YMR123W SPT3P06844 337 aa1.12□□□□□ -2.23
PKR1YMR123W NMT1P14743 455 aa1.12□□□□□ -2.23
PKR1YMR123W GRX2P17695 143 aaKnown RBP1.12□□□□□ -2.23
PKR1YMR123W SEC17P32602 292 aa1.12□□□□□ -2.23
PKR1YMR123W SSO1P32867 290 aa1.12□□□□□ -2.23
PKR1YMR123W RPS1AP33442 255 aaKnown RBP1.12□□□□□ -2.23
PKR1YMR123W YCR087C-AP37263 153 aa1.12□□□□□ -2.23
PKR1YMR123W ETR1P38071 380 aa1.12□□□□□ -2.23
PKR1YMR123W ECM33P38248 429 aaKnown RBP1.12□□□□□ -2.23
PKR1YMR123W YHR180WP38868 163 aa1.12□□□□□ -2.23
PKR1YMR123W AIM2P39721 246 aa1.12□□□□□ -2.23
PKR1YMR123W VTC1P40046 129 aaRIP-Chip data1.12□□□□□ -2.23not detected
PKR1YMR123W FMC1P40491 155 aa1.12□□□□□ -2.23
PKR1YMR123W YFL051CP43552 160 aa1.12□□□□□ -2.23
PKR1YMR123W ERG25P53045 309 aa1.12□□□□□ -2.23
PKR1YMR123W RPL22BP56628 122 aaKnown RBP1.12□□□□□ -2.23
PKR1YMR123W CYT2Q00873 224 aa1.12□□□□□ -2.23
PKR1YMR123W YET3Q07451 203 aa1.12□□□□□ -2.23
PKR1YMR123W GET4Q12125 312 aa1.12□□□□□ -2.23
PKR1YMR123W MED4Q12343 284 aa1.12□□□□□ -2.23
PKR1YMR123W ARG80P07249 177 aa1.11□□□□□ -2.23
PKR1YMR123W CDC10P25342 322 aaKnown RBP1.11□□□□□ -2.23
PKR1YMR123W BUB2P26448 306 aaPredicted RBP1.11□□□□□ -2.23
PKR1YMR123W YBR220CP38318 560 aa1.11□□□□□ -2.23
PKR1YMR123W MIC12P38341 106 aa1.11□□□□□ -2.23
PKR1YMR123W YHL037CP38733 133 aa1.11□□□□□ -2.23
PKR1YMR123W YHR022CP38763 256 aa1.11□□□□□ -2.23
PKR1YMR123W RPF1P38805 295 aaKnown RBP1.11□□□□□ -2.23
PKR1YMR123W DSE2P38844 325 aa1.11□□□□□ -2.23
PKR1YMR123W PRE6P40303 254 aaKnown RBP1.11□□□□□ -2.23
PKR1YMR123W RPS12P48589 143 aaKnown RBP1.11□□□□□ -2.23
PKR1YMR123W YGR219WP53307 113 aa1.11□□□□□ -2.23
PKR1YMR123W ERV29P53337 310 aa1.11□□□□□ -2.23
PKR1YMR123W MRPL50P53724 139 aa1.11□□□□□ -2.23
PKR1YMR123W SWP1Q02795 286 aa1.11□□□□□ -2.23
PKR1YMR123W NCE101Q02820 53 aa1.11□□□□□ -2.23
PKR1YMR123W YDR249CQ03787 373 aa1.11□□□□□ -2.23
PKR1YMR123W SML1Q04964 104 aa1.11□□□□□ -2.23
PKR1YMR123W YLR283WQ05867 314 aa1.11□□□□□ -2.23
PKR1YMR123W ATG39Q06159 398 aa1.11□□□□□ -2.23
PKR1YMR123W RAF1Q06891 181 aa1.11□□□□□ -2.23
PKR1YMR123W YLR036CQ07986 203 aa1.11□□□□□ -2.23
PKR1YMR123W YPL257WQ08974 193 aa1.11□□□□□ -2.23
PKR1YMR123W YLR053CQ12026 108 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 84.9 ms