RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C SPO24Q3E752 67 aa7.61□□□□□ -1.19
SEC61YLR378C FCY2P17064 533 aa7.61□□□□□ -1.19
SEC61YLR378C CNB1P25296 175 aa7.61□□□□□ -1.19
SEC61YLR378C CAF40P53829 373 aa7.61□□□□□ -1.19
SEC61YLR378C SNA4Q07549 140 aa7.61□□□□□ -1.19
SEC61YLR378C TRP4P07285 380 aaPredicted RBP7.6□□□□□ -1.19
SEC61YLR378C RPS25BP0C0T4 108 aaKnown RBP7.6□□□□□ -1.19
SEC61YLR378C ACP1P32463 125 aa7.6□□□□□ -1.19
SEC61YLR378C GNP1P48813 663 aa7.6□□□□□ -1.19
SEC61YLR378C TY1A-DR3Q12441 440 aa7.6□□□□□ -1.19
SEC61YLR378C RPS25AQ3E792 108 aaPredicted RBP7.6□□□□□ -1.19
SEC61YLR378C TDH1P00360 332 aaKnown RBP7.59□□□□□ -1.19
SEC61YLR378C SPO13P23624 291 aa7.59□□□□□ -1.19
SEC61YLR378C YBR184WP38299 523 aa7.59□□□□□ -1.19
SEC61YLR378C PSD1P39006 500 aa7.59□□□□□ -1.19
SEC61YLR378C POG1P40473 351 aa7.59□□□□□ -1.19
SEC61YLR378C YIL024CP40543 189 aa7.59□□□□□ -1.19
SEC61YLR378C SMD3P43321 101 aaKnown RBP7.59□□□□□ -1.19
SEC61YLR378C YFL015CP43578 164 aa7.59□□□□□ -1.19
SEC61YLR378C YAP1802P53309 568 aa7.59□□□□□ -1.19
SEC61YLR378C HCH1P53834 153 aa7.59□□□□□ -1.19
SEC61YLR378C YPS3Q12303 508 aa7.59□□□□□ -1.19
SEC61YLR378C TEL1P38110 2787 aa7.58□□□□□ -1.2
SEC61YLR378C RPL43AP0CX25 92 aaKnown RBP7.58□□□□□ -1.2
SEC61YLR378C RPL43BP0CX26 92 aa7.58□□□□□ -1.2
SEC61YLR378C ELO2P25358 347 aa7.58□□□□□ -1.2
SEC61YLR378C PMU1P36069 295 aa7.58□□□□□ -1.2
SEC61YLR378C ATP3P38077 311 aaKnown RBP7.58□□□□□ -1.2
SEC61YLR378C ADH5P38113 351 aaKnown RBP7.58□□□□□ -1.2
SEC61YLR378C FLO5P38894 1075 aa7.58□□□□□ -1.2
SEC61YLR378C NOP16P40007 231 aaKnown RBP7.58□□□□□ -1.2
SEC61YLR378C NSA2P40078 261 aaKnown RBP7.58□□□□□ -1.2
SEC61YLR378C SSU72P53538 206 aaPredicted RBP7.58□□□□□ -1.2
SEC61YLR378C TMC1Q08422 150 aaPredicted RBP7.58□□□□□ -1.2
SEC61YLR378C Q0142Q9ZZW4 58 aa7.58□□□□□ -1.2
SEC61YLR378C CUP1-1P0CX80 61 aa7.57□□□□□ -1.2
SEC61YLR378C CUP1-2P0CX81 61 aa7.57□□□□□ -1.2
SEC61YLR378C NOP1P15646 327 aaKnown RBP7.57□□□□□ -1.2
SEC61YLR378C QCR9P22289 66 aa7.57□□□□□ -1.2
SEC61YLR378C CDC50P25656 391 aa7.57□□□□□ -1.2
SEC61YLR378C AHT1P29589 182 aa7.57□□□□□ -1.2
SEC61YLR378C SHB17P36136 271 aaKnown RBP7.57□□□□□ -1.2
SEC61YLR378C YGR269WP40326 108 aa7.57□□□□□ -1.2
SEC61YLR378C DFG10P40526 253 aa7.57□□□□□ -1.2
SEC61YLR378C NCA3P46955 337 aa7.57□□□□□ -1.2
SEC61YLR378C YIP1P53039 248 aa7.57□□□□□ -1.2
SEC61YLR378C DYN2Q02647 92 aa7.57□□□□□ -1.2
SEC61YLR378C RAX2Q12465 1220 aa7.57□□□□□ -1.2
SEC61YLR378C RTS2P40962 232 aa7.56□□□□□ -1.2
SEC61YLR378C HXT14P42833 540 aa7.56□□□□□ -1.2
SEC61YLR378C RIB4P50861 169 aaPredicted RBP7.56□□□□□ -1.2
SEC61YLR378C YGR045CP53229 120 aa7.56□□□□□ -1.2
SEC61YLR378C FRQ1Q06389 190 aa7.56□□□□□ -1.2
SEC61YLR378C SME1Q12330 94 aaPredicted RBP7.56□□□□□ -1.2
SEC61YLR378C YPR071WQ12346 211 aa7.56□□□□□ -1.2
SEC61YLR378C YBL029C-AQ3E756 94 aa7.56□□□□□ -1.2
SEC61YLR378C HTB1P02293 131 aaKnown RBP7.55□□□□□ -1.2
SEC61YLR378C BGL2P15703 313 aaKnown RBP7.55□□□□□ -1.2
SEC61YLR378C ALG14P38242 237 aa7.55□□□□□ -1.2
SEC61YLR378C WSS1P38838 269 aa7.55□□□□□ -1.2
SEC61YLR378C PAU4P53427 120 aa7.55□□□□□ -1.2
SEC61YLR378C DAL4Q04895 635 aa7.55□□□□□ -1.2
SEC61YLR378C ZEO1Q08245 113 aa7.55□□□□□ -1.2
SEC61YLR378C USV1Q12132 391 aa7.55□□□□□ -1.2
SEC61YLR378C POC4Q12245 148 aaPredicted RBP7.55□□□□□ -1.2
SEC61YLR378C TOR1P35169 2470 aa7.55□□□□□ -1.2
SEC61YLR378C HEM13P11353 328 aaKnown RBP7.54□□□□□ -1.2
SEC61YLR378C RPL14AP36105 138 aaKnown RBP7.54□□□□□ -1.2
SEC61YLR378C RPL14BP38754 138 aaKnown RBP7.54□□□□□ -1.2
SEC61YLR378C PET100P38958 111 aa7.54□□□□□ -1.2
SEC61YLR378C PGD1P40356 397 aa7.54□□□□□ -1.2
SEC61YLR378C YIR020CP40575 100 aa7.54□□□□□ -1.2
SEC61YLR378C SNO1Q03144 224 aa7.54□□□□□ -1.2
SEC61YLR378C ADH6Q04894 360 aaKnown RBP7.54□□□□□ -1.2
SEC61YLR378C ARR3Q06598 404 aa7.54□□□□□ -1.2
SEC61YLR378C CSI2Q08054 341 aa7.54□□□□□ -1.2
SEC61YLR378C YIL012WP40551 113 aa7.53□□□□□ -1.2
SEC61YLR378C ABM1P47146 123 aa7.53□□□□□ -1.2
SEC61YLR378C MIX17Q03667 156 aa7.53□□□□□ -1.2
SEC61YLR378C YMR253CQ04835 414 aa7.53□□□□□ -1.2
SEC61YLR378C PAU1P0CE88 120 aa7.52□□□□□ -1.2
SEC61YLR378C PAU14P0CE89 120 aa7.52□□□□□ -1.2
SEC61YLR378C PAU6P0CE90 120 aa7.52□□□□□ -1.2
SEC61YLR378C PAU18P0CE91 120 aa7.52□□□□□ -1.2
SEC61YLR378C PAU8P0CE92 120 aa7.52□□□□□ -1.2
SEC61YLR378C PAU11P0CE93 120 aa7.52□□□□□ -1.2
SEC61YLR378C SEC59P20048 519 aa7.52□□□□□ -1.2
SEC61YLR378C RAD23P32628 398 aaKnown RBP7.52□□□□□ -1.2
SEC61YLR378C YBL059WP34224 193 aa7.52□□□□□ -1.2
SEC61YLR378C PAU13P38725 120 aa7.52□□□□□ -1.2
SEC61YLR378C YJR015WP47090 510 aa7.52□□□□□ -1.2
SEC61YLR378C MIC27P50945 234 aa7.52□□□□□ -1.2
SEC61YLR378C CRH1P53301 507 aa7.52□□□□□ -1.2
SEC61YLR378C BOR1P53838 576 aa7.52□□□□□ -1.2
SEC61YLR378C PAU10Q03050 120 aa7.52□□□□□ -1.2
SEC61YLR378C PAU20Q08322 120 aa7.52□□□□□ -1.2
SEC61YLR378C PAU9Q3E770 120 aa7.52□□□□□ -1.2
SEC61YLR378C TY1A-DR4O74302 440 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-AP0CX57 440 aa7.52□□□□□ -1.21
SEC61YLR378C TY1A-PR1P0CX58 440 aa7.52□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 81.6 ms