RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	TDA4	P47153	279 aa		3.2	□□□□□ -1.9
RSA3	YLR221C	YIP3	P53633	176 aa		3.2	□□□□□ -1.9
RSA3	YLR221C	RPL35A	P0CX84	120 aa	Known RBP	3.19	□□□□□ -1.9
RSA3	YLR221C	RPL35B	P0CX85	120 aa	Known RBP	3.19	□□□□□ -1.9
RSA3	YLR221C	POR1	P04840	283 aa	Known RBP	3.18	□□□□□ -1.9
RSA3	YLR221C	RPS24A	P0CX31	135 aa	Known RBP	3.18	□□□□□ -1.9
RSA3	YLR221C	RPS24B	P0CX32	135 aa	Known RBP	3.18	□□□□□ -1.9
RSA3	YLR221C	AHC2	P25649	128 aa		3.18	□□□□□ -1.9
RSA3	YLR221C	TFC1	P32367	649 aa		3.18	□□□□□ -1.9
RSA3	YLR221C	PGA1	P53896	198 aa		3.18	□□□□□ -1.9
RSA3	YLR221C	YLR460C	P54007	376 aa		3.18	□□□□□ -1.9
RSA3	YLR221C	YOL014W	Q08110	124 aa		3.18	□□□□□ -1.9
RSA3	YLR221C	YML100W-A	Q8TGT0	57 aa		3.18	□□□□□ -1.9
RSA3	YLR221C	YLR236C	A0A023PZG4	107 aa		3.17	□□□□□ -1.9
RSA3	YLR221C	YAR023C	D6VPM8	179 aa		3.17	□□□□□ -1.9
RSA3	YLR221C	SEC14	P24280	304 aa	Known RBP	3.17	□□□□□ -1.9
RSA3	YLR221C	YKR041W	P36134	250 aa		3.17	□□□□□ -1.9
RSA3	YLR221C	MTW1	P39731	289 aa		3.17	□□□□□ -1.9
RSA3	YLR221C	LSM4	P40070	187 aa	Known RBP	3.17	□□□□□ -1.9
RSA3	YLR221C	JAC1	P53193	184 aa		3.17	□□□□□ -1.9
RSA3	YLR221C	CUE4	Q04201	117 aa	Predicted RBP	3.17	□□□□□ -1.9
RSA3	YLR221C	SHH4	Q06236	168 aa		3.17	□□□□□ -1.9
RSA3	YLR221C	BRX1	Q08235	291 aa	Known RBP	3.17	□□□□□ -1.9
RSA3	YLR221C	MAK5	P38112	773 aa	Predicted RBP	3.16	□□□□□ -1.9
RSA3	YLR221C	YNL247W	P53852	767 aa	Known RBP	3.16	□□□□□ -1.9
RSA3	YLR221C	MPD1	Q12404	318 aa	Known RBP	3.16	□□□□□ -1.9
RSA3	YLR221C	CLG1	P35190	452 aa		3.15	□□□□□ -1.91
RSA3	YLR221C	NVJ1	P38881	321 aa		3.15	□□□□□ -1.91
RSA3	YLR221C	MPC3	P53311	146 aa		3.15	□□□□□ -1.91
RSA3	YLR221C	YMR295C	Q03559	197 aa		3.15	□□□□□ -1.91
RSA3	YLR221C	HPT1	Q04178	221 aa	Known RBP	3.15	□□□□□ -1.91
RSA3	YLR221C	ANT1	Q06497	328 aa		3.15	□□□□□ -1.91
RSA3	YLR221C	YOR342C	Q12182	319 aa		3.15	□□□□□ -1.91
RSA3	YLR221C	RAD51	P25454	400 aa		3.14	□□□□□ -1.91
RSA3	YLR221C	TMA19	P35691	167 aa	Known RBP	3.14	□□□□□ -1.91
RSA3	YLR221C	ERJ5	P43613	295 aa	Predicted RBP	3.14	□□□□□ -1.91
RSA3	YLR221C	POP3	P53833	195 aa	Predicted RBP	3.14	□□□□□ -1.91
RSA3	YLR221C	YMR099C	Q03161	297 aa	Known RBP	3.14	□□□□□ -1.91
RSA3	YLR221C	SPO13	P23624	291 aa		3.13	□□□□□ -1.91
RSA3	YLR221C	ARO7	P32178	256 aa		3.13	□□□□□ -1.91
RSA3	YLR221C	NSG1	P38837	291 aa		3.13	□□□□□ -1.91
RSA3	YLR221C	YER076C	P40049	302 aa		3.13	□□□□□ -1.91
RSA3	YLR221C	KNH1	P50112	268 aa		3.13	□□□□□ -1.91
RSA3	YLR221C	YNL140C	P53910	189 aa		3.13	□□□□□ -1.91
RSA3	YLR221C	GPI17	Q04080	534 aa		3.13	□□□□□ -1.91
RSA3	YLR221C	YKL102C	P34249	101 aa		3.12	□□□□□ -1.91
RSA3	YLR221C	ECM4	P36156	370 aa		3.12	□□□□□ -1.91
RSA3	YLR221C	TVP23	P38962	199 aa		3.12	□□□□□ -1.91
RSA3	YLR221C	YFR054C	P43622	192 aa		3.12	□□□□□ -1.91
RSA3	YLR221C	YLR050C	Q12155	161 aa	Known RBP	3.12	□□□□□ -1.91
RSA3	YLR221C	YLR412C-A	Q3E742	68 aa		3.12	□□□□□ -1.91
RSA3	YLR221C	YFL019C	P43576	117 aa		3.11	□□□□□ -1.91
RSA3	YLR221C	VPS71	Q03433	280 aa		3.11	□□□□□ -1.91
RSA3	YLR221C	NAT3	Q06504	195 aa		3.11	□□□□□ -1.91
RSA3	YLR221C	PEX11	Q12462	236 aa		3.11	□□□□□ -1.91
RSA3	YLR221C	FLO9	P39712	1322 aa		3.11	□□□□□ -1.91
RSA3	YLR221C	TVP38	P36164	337 aa		3.1	□□□□□ -1.91
RSA3	YLR221C	YBR219C	P38317	127 aa		3.1	□□□□□ -1.91
RSA3	YLR221C	PLP1	Q04004	230 aa		3.1	□□□□□ -1.91
RSA3	YLR221C	SHH3	Q04487	196 aa		3.1	□□□□□ -1.91
RSA3	YLR221C	RAD28	Q12021	506 aa		3.1	□□□□□ -1.91
RSA3	YLR221C	SEC11	P15367	167 aa		3.09	□□□□□ -1.91
RSA3	YLR221C	CUP9	P41817	306 aa		3.09	□□□□□ -1.91
RSA3	YLR221C	GPI14	P47088	403 aa	Known RBP	3.09	□□□□□ -1.91
RSA3	YLR221C	BAT2	P47176	376 aa	Known RBP	3.09	□□□□□ -1.91
RSA3	YLR221C	YER135C	P40082	130 aa		3.07	□□□□□ -1.92
RSA3	YLR221C	RFC2	P40348	353 aa		3.07	□□□□□ -1.92
RSA3	YLR221C	TIR1	P10863	254 aa		3.06	□□□□□ -1.92
RSA3	YLR221C	NSP1	P14907	823 aa	Known RBP	3.06	□□□□□ -1.92
RSA3	YLR221C	VMA22	P38784	181 aa		3.06	□□□□□ -1.92
RSA3	YLR221C	YLR162W	Q06235	118 aa		3.06	□□□□□ -1.92
RSA3	YLR221C	IRC23	Q08416	157 aa		3.06	□□□□□ -1.92
RSA3	YLR221C	YDL180W	Q12301	547 aa		3.06	□□□□□ -1.92
RSA3	YLR221C	DGK1	Q12382	290 aa		3.06	□□□□□ -1.92
RSA3	YLR221C	CMD1	P06787	147 aa	Known RBP	3.05	□□□□□ -1.92
RSA3	YLR221C	FES1	P38260	290 aa		3.05	□□□□□ -1.92
RSA3	YLR221C	YPR174C	Q06616	221 aa	Predicted RBP	3.05	□□□□□ -1.92
RSA3	YLR221C	SPC25	P40014	221 aa		3.04	□□□□□ -1.92
RSA3	YLR221C	YMR253C	Q04835	414 aa		3.04	□□□□□ -1.92
RSA3	YLR221C	YOL162W	P0CF19	215 aa		3.03	□□□□□ -1.92
RSA3	YLR221C	PHO85	P17157	305 aa		3.03	□□□□□ -1.92
RSA3	YLR221C	YER121W	P40076	114 aa		3.03	□□□□□ -1.92
RSA3	YLR221C	NSA2	P40078	261 aa	Known RBP	3.03	□□□□□ -1.92
RSA3	YLR221C	RPL13B	P40212	199 aa	Known RBP	3.03	□□□□□ -1.92
RSA3	YLR221C	CSI2	Q08054	341 aa		3.03	□□□□□ -1.92
RSA3	YLR221C	RPL13A	Q12690	199 aa	Predicted RBP	3.03	□□□□□ -1.92
RSA3	YLR221C	IDP1	P21954	428 aa	Known RBP	3.02	□□□□□ -1.93
RSA3	YLR221C	YKR045C	P36138	183 aa		3.02	□□□□□ -1.93
RSA3	YLR221C	PAM17	P36147	197 aa		3.02	□□□□□ -1.93
RSA3	YLR221C	YPL073C	P40323	161 aa		3.02	□□□□□ -1.93
RSA3	YLR221C	XPT1	P47165	209 aa		3.02	□□□□□ -1.93
RSA3	YLR221C	QCR2	P07257	368 aa		3.01	□□□□□ -1.93
RSA3	YLR221C	YGL010W	P25338	174 aa		3.01	□□□□□ -1.93
RSA3	YLR221C	RME1	P32338	300 aa	Known RBP	3.01	□□□□□ -1.93
RSA3	YLR221C	MPA43	P53583	542 aa	Predicted RBP	3.01	□□□□□ -1.93
RSA3	YLR221C	YNL033W	P53964	284 aa		3.01	□□□□□ -1.93
RSA3	YLR221C	YHR007C-A	Q07074	71 aa		3.01	□□□□□ -1.93
RSA3	YLR221C	QCR6	P00127	147 aa		3	□□□□□ -1.93
RSA3	YLR221C	TTI2	P47168	421 aa		3	□□□□□ -1.93
RSA3	YLR221C	DIG2	Q03373	323 aa	Known RBP	3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms