RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C GIS3Q12418 502 aa0.69□□□□□ -2.3
AFB1YLR040C RPB7P34087 171 aa0.68□□□□□ -2.3
AFB1YLR040C GCN20P43535 752 aaKnown RBP0.68□□□□□ -2.3
AFB1YLR040C YLR460CP54007 376 aa0.68□□□□□ -2.3
AFB1YLR040C DIG2Q03373 323 aaKnown RBP0.68□□□□□ -2.3
AFB1YLR040C LCL2Q08045 131 aa0.68□□□□□ -2.3
AFB1YLR040C YPR013CQ12145 317 aa0.68□□□□□ -2.3
AFB1YLR040C COA3Q3E7B2 85 aa0.68□□□□□ -2.3
AFB1YLR040C PHO85P17157 305 aa0.67□□□□□ -2.3
AFB1YLR040C ECM4P36156 370 aa0.67□□□□□ -2.3
AFB1YLR040C ARP3P47117 449 aaKnown RBP0.67□□□□□ -2.3
AFB1YLR040C THG1P53215 237 aaKnown RBP0.67□□□□□ -2.3
AFB1YLR040C YOL014WQ08110 124 aa0.67□□□□□ -2.3
AFB1YLR040C YAR023CD6VPM8 179 aa0.66□□□□□ -2.3
AFB1YLR040C MBF1O14467 151 aaKnown RBP0.66□□□□□ -2.3
AFB1YLR040C YJR111CP47148 283 aaKnown RBP0.66□□□□□ -2.3
AFB1YLR040C UBC12P52491 188 aa0.66□□□□□ -2.3
AFB1YLR040C MRS1P07266 363 aa0.65□□□□□ -2.31
AFB1YLR040C PAM17P36147 197 aa0.65□□□□□ -2.31
AFB1YLR040C AIM2P39721 246 aa0.65□□□□□ -2.31
AFB1YLR040C SKI6P46948 246 aaPredicted RBP0.65□□□□□ -2.31
AFB1YLR040C PGA2P53903 129 aa0.65□□□□□ -2.31
AFB1YLR040C SHH3Q04487 196 aa0.65□□□□□ -2.31
AFB1YLR040C DYN3Q04949 312 aa0.65□□□□□ -2.31
AFB1YLR040C NAT3Q06504 195 aa0.65□□□□□ -2.31
AFB1YLR040C YCL012CQ8J0M4 134 aa0.65□□□□□ -2.31
AFB1YLR040C HTB1P02293 131 aaKnown RBP0.64□□□□□ -2.31
AFB1YLR040C HTB2P02294 131 aa0.64□□□□□ -2.31
AFB1YLR040C CDC36P06100 191 aaPredicted RBP0.64□□□□□ -2.31
AFB1YLR040C TIR1P10863 254 aa0.64□□□□□ -2.31
AFB1YLR040C ASF2P32448 525 aaPredicted RBP0.64□□□□□ -2.31
AFB1YLR040C YER134CP40081 178 aa0.64□□□□□ -2.31
AFB1YLR040C YNL033WP53964 284 aa0.64□□□□□ -2.31
AFB1YLR040C YMR295CQ03559 197 aa0.64□□□□□ -2.31
AFB1YLR040C UPS3Q04006 179 aa0.64□□□□□ -2.31
AFB1YLR040C BNA7Q04066 261 aa0.64□□□□□ -2.31
AFB1YLR040C FUS2Q05670 677 aa0.64□□□□□ -2.31
AFB1YLR040C RUD3Q12234 484 aaKnown RBP0.64□□□□□ -2.31
AFB1YLR040C RFC4P40339 323 aaKnown RBP0.63□□□□□ -2.31
AFB1YLR040C MET31Q03081 177 aa0.63□□□□□ -2.31
AFB1YLR040C YDR391CQ04170 232 aa0.63□□□□□ -2.31
AFB1YLR040C YML100W-AQ8TGT0 57 aa0.63□□□□□ -2.31
AFB1YLR040C SEN2P16658 377 aa0.62□□□□□ -2.31
AFB1YLR040C YPK2P18961 677 aa0.62□□□□□ -2.31
AFB1YLR040C STP22P25604 385 aa0.62□□□□□ -2.31
AFB1YLR040C MGT1P26188 188 aa0.62□□□□□ -2.31
AFB1YLR040C ARO7P32178 256 aa0.62□□□□□ -2.31
AFB1YLR040C MRPL15P36523 253 aa0.62□□□□□ -2.31
AFB1YLR040C MTW1P39731 289 aa0.62□□□□□ -2.31
AFB1YLR040C RNH1Q04740 348 aa0.62□□□□□ -2.31
AFB1YLR040C CBF1P17106 351 aa0.61□□□□□ -2.31
AFB1YLR040C SFK1P35735 353 aa0.61□□□□□ -2.31
AFB1YLR040C ALB1P47019 175 aaPredicted RBP0.61□□□□□ -2.31
AFB1YLR040C YMR253CQ04835 414 aa0.61□□□□□ -2.31
AFB1YLR040C YPR203WQ08994 102 aa0.61□□□□□ -2.31
AFB1YLR040C GSP2P32836 220 aaKnown RBP0.6□□□□□ -2.31
AFB1YLR040C CUP9P41817 306 aa0.6□□□□□ -2.31
AFB1YLR040C MMS2P53152 137 aa0.6□□□□□ -2.31
AFB1YLR040C PST2Q12335 198 aaKnown RBP0.6□□□□□ -2.31
AFB1YLR040C MATALPHA2P0CY08 210 aa0.59□□□□□ -2.31
AFB1YLR040C HMLALPHA2P0CY09 210 aa0.59□□□□□ -2.31
AFB1YLR040C IDP1P21954 428 aaKnown RBP0.59□□□□□ -2.31
AFB1YLR040C YBR242WP38331 238 aa0.59□□□□□ -2.31
AFB1YLR040C YHL037CP38733 133 aa0.59□□□□□ -2.31
AFB1YLR040C SPC25P40014 221 aa0.59□□□□□ -2.31
AFB1YLR040C YFL019CP43576 117 aa0.59□□□□□ -2.31
AFB1YLR040C GPI14P47088 403 aaKnown RBP0.59□□□□□ -2.31
AFB1YLR040C TDA4P47153 279 aa0.59□□□□□ -2.31
AFB1YLR040C NOP19P53317 196 aaPredicted RBP0.59□□□□□ -2.31
AFB1YLR040C YNL184CP53876 108 aa0.59□□□□□ -2.31
AFB1YLR040C YMR315WQ04869 349 aaKnown RBP0.59□□□□□ -2.31
AFB1YLR040C TAR1Q8TGM6 124 aa0.59□□□□□ -2.31
AFB1YLR040C YLR422WQ06409 1932 aa0.59□□□□□ -2.32
AFB1YLR040C SNF4P12904 322 aa0.58□□□□□ -2.32
AFB1YLR040C PDS1P40316 373 aaPredicted RBP0.58□□□□□ -2.32
AFB1YLR040C ARO80Q04052 950 aa0.58□□□□□ -2.32
AFB1YLR040C YLR031WQ07978 186 aa0.58□□□□□ -2.32
AFB1YLR040C FYV12Q08559 129 aa0.58□□□□□ -2.32
AFB1YLR040C QCR7P00128 127 aa0.57□□□□□ -2.32
AFB1YLR040C UBC8P28263 218 aa0.57□□□□□ -2.32
AFB1YLR040C UGX2P32772 223 aa0.57□□□□□ -2.32
AFB1YLR040C FMP23P38231 175 aa0.57□□□□□ -2.32
AFB1YLR040C TIM11P81449 96 aaPredicted RBP0.57□□□□□ -2.32
AFB1YLR040C VPS71Q03433 280 aa0.57□□□□□ -2.32
AFB1YLR040C YMR226CQ05016 267 aaKnown RBP0.57□□□□□ -2.32
AFB1YLR040C YLR036CQ07986 203 aa0.57□□□□□ -2.32
AFB1YLR040C IGO2Q9P305 131 aa0.57□□□□□ -2.32
AFB1YLR040C YCR023CP25351 611 aa0.56□□□□□ -2.32
AFB1YLR040C AHT1P29589 182 aa0.56□□□□□ -2.32
AFB1YLR040C YFL051CP43552 160 aa0.56□□□□□ -2.32
AFB1YLR040C YGL235WP53071 178 aa0.56□□□□□ -2.32
AFB1YLR040C MRPS17Q03246 237 aaPredicted RBP0.56□□□□□ -2.32
AFB1YLR040C ABP140Q08641 628 aaKnown RBP0.56□□□□□ -2.32
AFB1YLR040C ADF1Q2V2Q1 113 aa0.56□□□□□ -2.32
AFB1YLR040C MPM1P40364 252 aa0.55□□□□□ -2.32
AFB1YLR040C RRP17Q04031 235 aaPredicted RBP0.55□□□□□ -2.32
AFB1YLR040C GET4Q12125 312 aa0.55□□□□□ -2.32
AFB1YLR040C RPB4P20433 221 aaPredicted RBP0.54□□□□□ -2.32
AFB1YLR040C MAK5P38112 773 aaPredicted RBP0.54□□□□□ -2.32
AFB1YLR040C ATP20Q12233 115 aa0.54□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 128 ms