RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W MRPL27P36526 146 aaPredicted RBP3.36□□□□□ -1.87
SOF1YLL011W BDH1P39714 382 aa3.36□□□□□ -1.87
SOF1YLL011W MDM34P53083 459 aa3.36□□□□□ -1.87
SOF1YLL011W DID2P69771 204 aa3.36□□□□□ -1.87
SOF1YLL011W TVP15Q03860 143 aa3.36□□□□□ -1.87
SOF1YLL011W HPT1Q04178 221 aaKnown RBP3.36□□□□□ -1.87
SOF1YLL011W LPP1Q04396 274 aa3.36□□□□□ -1.87
SOF1YLL011W YPL257WQ08974 193 aa3.36□□□□□ -1.87
SOF1YLL011W YPL162CQ12042 273 aa3.36□□□□□ -1.87
SOF1YLL011W YOR020W-AQ3E824 90 aa3.36□□□□□ -1.87
SOF1YLL011W PDR18P53756 1333 aa3.36□□□□□ -1.87
SOF1YLL011W YEL009C-AA0A023PZF2 135 aa3.35□□□□□ -1.87
SOF1YLL011W COX10P21592 462 aa3.35□□□□□ -1.87
SOF1YLL011W CNB1P25296 175 aa3.35□□□□□ -1.87
SOF1YLL011W SFC1P33303 322 aa3.35□□□□□ -1.87
SOF1YLL011W YGP1P38616 354 aaKnown RBP3.35□□□□□ -1.87
SOF1YLL011W ECM34P38728 170 aa3.35□□□□□ -1.87
SOF1YLL011W TVP23P38962 199 aa3.35□□□□□ -1.87
SOF1YLL011W RPA43P46669 326 aa3.35□□□□□ -1.87
SOF1YLL011W ARO8P53090 500 aaKnown RBP3.35□□□□□ -1.87
SOF1YLL011W PLP1Q04004 230 aa3.35□□□□□ -1.87
SOF1YLL011W GPI17Q04080 534 aa3.35□□□□□ -1.87
SOF1YLL011W BBP1Q12365 385 aa3.35□□□□□ -1.87
SOF1YLL011W YMR230W-AQ3E7B5 62 aa3.35□□□□□ -1.87
SOF1YLL011W TEL1P38110 2787 aa3.35□□□□□ -1.87
SOF1YLL011W ECM29P38737 1868 aa3.35□□□□□ -1.87
SOF1YLL011W IDP1P21954 428 aaKnown RBP3.35□□□□□ -1.87
SOF1YLL011W YKL102CP34249 101 aa3.35□□□□□ -1.87
SOF1YLL011W RPF1P38805 295 aaKnown RBP3.35□□□□□ -1.87
SOF1YLL011W ARP3P47117 449 aaKnown RBP3.35□□□□□ -1.87
SOF1YLL011W IMP4P53941 290 aaKnown RBP3.35□□□□□ -1.87
SOF1YLL011W SWP1Q02795 286 aa3.35□□□□□ -1.87
SOF1YLL011W YDR476CQ03362 224 aa3.35□□□□□ -1.87
SOF1YLL011W DGA1Q08650 418 aa3.35□□□□□ -1.87
SOF1YLL011W RIO1Q12196 484 aaKnown RBP3.35□□□□□ -1.87
SOF1YLL011W SMT3Q12306 101 aaKnown RBP3.35□□□□□ -1.87
SOF1YLL011W YFR032C-BQ8TGU2 87 aa3.35□□□□□ -1.87
SOF1YLL011W YOL085CQ99345 113 aa3.35□□□□□ -1.87
SOF1YLL011W UTP30P36144 274 aaKnown RBP3.34□□□□□ -1.88
SOF1YLL011W YBR063CP38083 404 aa3.34□□□□□ -1.88
SOF1YLL011W YGL260WP53056 76 aa3.34□□□□□ -1.88
SOF1YLL011W MRPS16Q02608 121 aa3.34□□□□□ -1.88
SOF1YLL011W YPR202WQ08993 238 aa3.34□□□□□ -1.88
SOF1YLL011W ISD11Q6Q560 94 aa3.34□□□□□ -1.88
SOF1YLL011W UBR2Q07963 1872 aa3.33□□□□□ -1.88
SOF1YLL011W FAB1P34756 2278 aa3.33□□□□□ -1.88
SOF1YLL011W RNP1P32385 249 aa3.33□□□□□ -1.88
SOF1YLL011W UFE1P41834 346 aa3.33□□□□□ -1.88
SOF1YLL011W PET9P18239 318 aaKnown RBP3.32□□□□□ -1.88
SOF1YLL011W TVP38P36164 337 aa3.32□□□□□ -1.88
SOF1YLL011W TRM7P38238 310 aaKnown RBP3.32□□□□□ -1.88
SOF1YLL011W YAR068WP39564 161 aa3.32□□□□□ -1.88
SOF1YLL011W SNM1P40993 198 aa3.32□□□□□ -1.88
SOF1YLL011W YGR201CP42936 225 aa3.32□□□□□ -1.88
SOF1YLL011W YJR111CP47148 283 aaKnown RBP3.32□□□□□ -1.88
SOF1YLL011W TMA20P89886 181 aaPredicted RBP3.32□□□□□ -1.88
SOF1YLL011W IES4Q08561 116 aa3.32□□□□□ -1.88
SOF1YLL011W GEP5Q12393 293 aa3.32□□□□□ -1.88
SOF1YLL011W IRA2P19158 3079 aa3.32□□□□□ -1.88
SOF1YLL011W CKS1P20486 150 aaKnown RBP3.31□□□□□ -1.88
SOF1YLL011W RCN1P36054 211 aa3.31□□□□□ -1.88
SOF1YLL011W FMP23P38231 175 aa3.31□□□□□ -1.88
SOF1YLL011W POP4P38336 279 aa3.31□□□□□ -1.88
SOF1YLL011W IPI1P38803 334 aaPredicted RBP3.31□□□□□ -1.88
SOF1YLL011W SOL1P50278 321 aa3.31□□□□□ -1.88
SOF1YLL011W PGA1P53896 198 aa3.31□□□□□ -1.88
SOF1YLL011W PKR1Q03880 122 aaKnown RBP3.31□□□□□ -1.88
SOF1YLL011W YLR046CQ12253 270 aa3.31□□□□□ -1.88
SOF1YLL011W MPD1Q12404 318 aaKnown RBP3.31□□□□□ -1.88
SOF1YLL011W YPR014CQ6B0W2 109 aa3.31□□□□□ -1.88
SOF1YLL011W RPL2AP0CX45 254 aaKnown RBP3.3□□□□□ -1.88
SOF1YLL011W RPL2BP0CX46 254 aaKnown RBP3.3□□□□□ -1.88
SOF1YLL011W PEX34P25584 144 aa3.3□□□□□ -1.88
SOF1YLL011W LDB16P25587 256 aa3.3□□□□□ -1.88
SOF1YLL011W SEC17P32602 292 aa3.3□□□□□ -1.88
SOF1YLL011W SFK1P35735 353 aa3.3□□□□□ -1.88
SOF1YLL011W FIS1P40515 155 aa3.3□□□□□ -1.88
SOF1YLL011W RSM27P53305 110 aa3.3□□□□□ -1.88
SOF1YLL011W YDR249CQ03787 373 aa3.3□□□□□ -1.88
SOF1YLL011W MCH1Q07376 486 aa3.3□□□□□ -1.88
SOF1YLL011W RFU1Q08003 200 aa3.3□□□□□ -1.88
SOF1YLL011W PRR2Q12310 699 aa3.3□□□□□ -1.88
SOF1YLL011W TSC3Q3E790 80 aa3.3□□□□□ -1.88
SOF1YLL011W YLR156WP0CE96 114 aa3.29□□□□□ -1.88
SOF1YLL011W YLR159WP0CE97 114 aa3.29□□□□□ -1.88
SOF1YLL011W YLR161WP0CE98 114 aa3.29□□□□□ -1.88
SOF1YLL011W UBI4P0CG63 381 aaKnown RBP3.29□□□□□ -1.88
SOF1YLL011W CUP1-1P0CX80 61 aa3.29□□□□□ -1.88
SOF1YLL011W CUP1-2P0CX81 61 aa3.29□□□□□ -1.88
SOF1YLL011W MAK31P23059 88 aa3.29□□□□□ -1.88
SOF1YLL011W TOM40P23644 387 aaKnown RBP3.29□□□□□ -1.88
SOF1YLL011W SKG1P36169 355 aa3.29□□□□□ -1.88
SOF1YLL011W VMA22P38784 181 aa3.29□□□□□ -1.88
SOF1YLL011W YPI1P43587 155 aa3.29□□□□□ -1.88
SOF1YLL011W YGL101WP53144 215 aa3.29□□□□□ -1.88
SOF1YLL011W ATG39Q06159 398 aa3.29□□□□□ -1.88
SOF1YLL011W SGA1P08019 549 aa3.28□□□□□ -1.88
SOF1YLL011W SEN2P16658 377 aa3.28□□□□□ -1.88
SOF1YLL011W CSH1P38287 376 aa3.28□□□□□ -1.88
SOF1YLL011W COS8P38723 381 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms