RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C SHE2P36068 246 aaKnown RBP RIP-Chip data0.9□□□□□ -2.27not detected
RPL40BYKR094C NRG2P38082 220 aa0.9□□□□□ -2.27
RPL40BYKR094C OPY1P38271 328 aa0.9□□□□□ -2.27
RPL40BYKR094C SVP26P38869 228 aa0.9□□□□□ -2.27
RPL40BYKR094C NVJ1P38881 321 aa0.9□□□□□ -2.27
RPL40BYKR094C MTW1P39731 289 aa0.9□□□□□ -2.27
RPL40BYKR094C YER076CP40049 302 aa0.9□□□□□ -2.27
RPL40BYKR094C PEP8P40335 379 aa0.9□□□□□ -2.27
RPL40BYKR094C SER2P42941 309 aa0.9□□□□□ -2.27
RPL40BYKR094C YJL027CP47063 138 aaPredicted RBP0.9□□□□□ -2.27
RPL40BYKR094C YJR111CP47148 283 aaKnown RBP0.9□□□□□ -2.27
RPL40BYKR094C BAT2P47176 376 aaKnown RBP0.9□□□□□ -2.27
RPL40BYKR094C UBC12P52491 188 aa0.9□□□□□ -2.27
RPL40BYKR094C DOC1P53068 250 aa0.9□□□□□ -2.27
RPL40BYKR094C BUD25P85052 153 aa0.9□□□□□ -2.27
RPL40BYKR094C YDR476CQ03362 224 aa0.9□□□□□ -2.27
RPL40BYKR094C HPT1Q04178 221 aaKnown RBP0.9□□□□□ -2.27
RPL40BYKR094C CUE4Q04201 117 aaPredicted RBP0.9□□□□□ -2.27
RPL40BYKR094C FSF1Q12029 327 aaKnown RBP0.9□□□□□ -2.27
RPL40BYKR094C YLR050CQ12155 161 aaKnown RBP0.9□□□□□ -2.27
RPL40BYKR094C MPD1Q12404 318 aaKnown RBP0.9□□□□□ -2.27
RPL40BYKR094C YHR086W-AQ3E746 53 aa0.9□□□□□ -2.27
RPL40BYKR094C ATG40Q99325 256 aa0.9□□□□□ -2.27
RPL40BYKR094C YAR023CD6VPM8 179 aa0.89□□□□□ -2.27
RPL40BYKR094C RAS2P01120 322 aaKnown RBP0.89□□□□□ -2.27
RPL40BYKR094C POR1P04840 283 aaKnown RBP0.89□□□□□ -2.27
RPL40BYKR094C RPS28BP0C0X0 67 aaKnown RBP0.89□□□□□ -2.27
RPL40BYKR094C RPL35AP0CX84 120 aaKnown RBP0.89□□□□□ -2.27
RPL40BYKR094C RPL35BP0CX85 120 aaKnown RBP0.89□□□□□ -2.27
RPL40BYKR094C KDX1P36005 433 aa0.89□□□□□ -2.27
RPL40BYKR094C TVP38P36164 337 aa0.89□□□□□ -2.27
RPL40BYKR094C NSG1P38837 291 aa0.89□□□□□ -2.27
RPL40BYKR094C CUP9P41817 306 aa0.89□□□□□ -2.27
RPL40BYKR094C GPI14P47088 403 aaKnown RBP0.89□□□□□ -2.27
RPL40BYKR094C TDA4P47153 279 aa0.89□□□□□ -2.27
RPL40BYKR094C BOL2P53082 120 aa0.89□□□□□ -2.27
RPL40BYKR094C TIM13P53299 105 aa0.89□□□□□ -2.27
RPL40BYKR094C YNR077CP53758 84 aa0.89□□□□□ -2.27
RPL40BYKR094C YNL247WP53852 767 aaKnown RBP0.89□□□□□ -2.27
RPL40BYKR094C PGA1P53896 198 aa0.89□□□□□ -2.27
RPL40BYKR094C TMA20P89886 181 aaPredicted RBP0.89□□□□□ -2.27
RPL40BYKR094C YMR099CQ03161 297 aaKnown RBP0.89□□□□□ -2.27
RPL40BYKR094C VPS71Q03433 280 aa0.89□□□□□ -2.27
RPL40BYKR094C SHH3Q04487 196 aa0.89□□□□□ -2.27
RPL40BYKR094C YMR315WQ04869 349 aaKnown RBP0.89□□□□□ -2.27
RPL40BYKR094C RPS28AQ3E7X9 67 aaPredicted RBP0.89□□□□□ -2.27
RPL40BYKR094C FLO9P39712 1322 aa0.89□□□□□ -2.27
RPL40BYKR094C YLR236CA0A023PZG4 107 aa0.88□□□□□ -2.27
RPL40BYKR094C DDI2P0CH63 225 aa0.88□□□□□ -2.27
RPL40BYKR094C DDI3P0CH64 225 aa0.88□□□□□ -2.27
RPL40BYKR094C RME1P32338 300 aaKnown RBP0.88□□□□□ -2.27
RPL40BYKR094C ARC19P33204 171 aaKnown RBP0.88□□□□□ -2.27
RPL40BYKR094C YKL102CP34249 101 aa0.88□□□□□ -2.27
RPL40BYKR094C YKR041WP36134 250 aa0.88□□□□□ -2.27
RPL40BYKR094C MAK5P38112 773 aaPredicted RBP0.88□□□□□ -2.27
RPL40BYKR094C FES1P38260 290 aa0.88□□□□□ -2.27
RPL40BYKR094C AME1P38313 324 aa0.88□□□□□ -2.27
RPL40BYKR094C RFC2P40348 353 aa0.88□□□□□ -2.27
RPL40BYKR094C YFH7P43591 353 aa0.88□□□□□ -2.27
RPL40BYKR094C ERJ5P43613 295 aaPredicted RBP0.88□□□□□ -2.27
RPL40BYKR094C SBH1P52870 82 aa0.88□□□□□ -2.27
RPL40BYKR094C YGL235WP53071 178 aa0.88□□□□□ -2.27
RPL40BYKR094C EFM5P53200 248 aaKnown RBP0.88□□□□□ -2.27
RPL40BYKR094C YNL140CP53910 189 aa0.88□□□□□ -2.27
RPL40BYKR094C VPS28Q02767 242 aa0.88□□□□□ -2.27
RPL40BYKR094C GPI17Q04080 534 aa0.88□□□□□ -2.27
RPL40BYKR094C SML1Q04964 104 aa0.88□□□□□ -2.27
RPL40BYKR094C YPR174CQ06616 221 aaPredicted RBP0.88□□□□□ -2.27
RPL40BYKR094C RAD28Q12021 506 aa0.88□□□□□ -2.27
RPL40BYKR094C YLR412C-AQ3E742 68 aa0.88□□□□□ -2.27
RPL40BYKR094C PDR18P53756 1333 aa0.88□□□□□ -2.27
RPL40BYKR094C CLG1P35190 452 aa0.87□□□□□ -2.27
RPL40BYKR094C TMA19P35691 167 aaKnown RBP0.87□□□□□ -2.27
RPL40BYKR094C GAA1P39012 614 aa0.87□□□□□ -2.27
RPL40BYKR094C AYR1P40471 297 aa0.87□□□□□ -2.27
RPL40BYKR094C XPT1P47165 209 aa0.87□□□□□ -2.27
RPL40BYKR094C ANT1Q06497 328 aa0.87□□□□□ -2.27
RPL40BYKR094C YHR007C-AQ07074 71 aa0.87□□□□□ -2.27
RPL40BYKR094C YLR053CQ12026 108 aa0.87□□□□□ -2.27
RPL40BYKR094C YDL180WQ12301 547 aa0.87□□□□□ -2.27
RPL40BYKR094C SPO13P23624 291 aa0.86□□□□□ -2.27
RPL40BYKR094C STP22P25604 385 aa0.86□□□□□ -2.27
RPL40BYKR094C ARO7P32178 256 aa0.86□□□□□ -2.27
RPL40BYKR094C UBC6P33296 250 aaPredicted RBP0.86□□□□□ -2.27
RPL40BYKR094C PAM17P36147 197 aa0.86□□□□□ -2.27
RPL40BYKR094C SPC25P40014 221 aa0.86□□□□□ -2.27
RPL40BYKR094C YER121WP40076 114 aa0.86□□□□□ -2.27
RPL40BYKR094C NSA2P40078 261 aaKnown RBP0.86□□□□□ -2.27
RPL40BYKR094C RIO2P40160 425 aaKnown RBP0.86□□□□□ -2.27
RPL40BYKR094C GLR1P41921 483 aaKnown RBP0.86□□□□□ -2.27
RPL40BYKR094C YFL019CP43576 117 aa0.86□□□□□ -2.27
RPL40BYKR094C YFR054CP43622 192 aa0.86□□□□□ -2.27
RPL40BYKR094C KNH1P50112 268 aa0.86□□□□□ -2.27
RPL40BYKR094C MPA43P53583 542 aaPredicted RBP0.86□□□□□ -2.27
RPL40BYKR094C DIG2Q03373 323 aaKnown RBP0.86□□□□□ -2.27
RPL40BYKR094C YMR253CQ04835 414 aa0.86□□□□□ -2.27
RPL40BYKR094C HRD1Q08109 551 aa0.86□□□□□ -2.27
RPL40BYKR094C IRC23Q08416 157 aa0.86□□□□□ -2.27
RPL40BYKR094C YOR214CQ12282 236 aa0.86□□□□□ -2.27
RPL40BYKR094C DGK1Q12382 290 aa0.86□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 277 ms