RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W HST4P53688 370 aa0.6□□□□□ -2.31
PRP16YKR086W YMR321CQ04898 105 aa0.6□□□□□ -2.31
PRP16YKR086W SWC7Q06707 132 aa0.6□□□□□ -2.31
PRP16YKR086W ADK1P07170 222 aaKnown RBP0.6□□□□□ -2.31
PRP16YKR086W POF1P25576 258 aa0.6□□□□□ -2.31
PRP16YKR086W SRP102P36057 244 aaPredicted RBP0.6□□□□□ -2.31
PRP16YKR086W ECM31P38122 312 aa0.6□□□□□ -2.31
PRP16YKR086W ASP1P38986 381 aaPredicted RBP0.6□□□□□ -2.31
PRP16YKR086W LCP5P40079 357 aaPredicted RBP0.6□□□□□ -2.31
PRP16YKR086W YJR054WP47114 497 aa0.6□□□□□ -2.31
PRP16YKR086W CTF19Q02732 369 aa0.6□□□□□ -2.31
PRP16YKR086W YMR099CQ03161 297 aaKnown RBP0.6□□□□□ -2.31
PRP16YKR086W RRT7Q07829 113 aa0.6□□□□□ -2.31
PRP16YKR086W YOR072WQ08486 104 aa0.6□□□□□ -2.31
PRP16YKR086W TAF10Q12030 206 aa0.6□□□□□ -2.31
PRP16YKR086W YDL157CQ12082 118 aa0.6□□□□□ -2.31
PRP16YKR086W MET2P08465 486 aa0.6□□□□□ -2.31
PRP16YKR086W YJL197C-AP0C5P0 93 aa0.6□□□□□ -2.31
PRP16YKR086W DBP3P20447 523 aaKnown RBP0.6□□□□□ -2.31
PRP16YKR086W IMP3P32899 183 aaPredicted RBP0.6□□□□□ -2.31
PRP16YKR086W TIP20P33891 701 aa0.6□□□□□ -2.31
PRP16YKR086W EFM1P38732 585 aa0.6□□□□□ -2.31
PRP16YKR086W PMT4P46971 762 aa0.6□□□□□ -2.31
PRP16YKR086W MNN5P46982 586 aa0.6□□□□□ -2.31
PRP16YKR086W CCC1P47818 322 aa0.6□□□□□ -2.31
PRP16YKR086W VPS20Q04272 221 aa0.6□□□□□ -2.31
PRP16YKR086W LOA1Q06508 300 aa0.6□□□□□ -2.31
PRP16YKR086W NDL1Q06568 189 aa0.6□□□□□ -2.31
PRP16YKR086W RAF1Q06891 181 aa0.6□□□□□ -2.31
PRP16YKR086W YHR007C-AQ07074 71 aa0.6□□□□□ -2.31
PRP16YKR086W RRT8Q08219 342 aa0.6□□□□□ -2.31
PRP16YKR086W AIM45Q12480 344 aaKnown RBP0.6□□□□□ -2.31
PRP16YKR086W RAD10P06838 210 aa0.59□□□□□ -2.31
PRP16YKR086W YER034WP40022 185 aaKnown RBP0.59□□□□□ -2.31
PRP16YKR086W MOG1P47123 218 aa0.59□□□□□ -2.31
PRP16YKR086W YNL040WP53960 456 aaPredicted RBP0.59□□□□□ -2.31
PRP16YKR086W YDR366CP87287 132 aa0.59□□□□□ -2.31
PRP16YKR086W SPG4Q04438 115 aa0.59□□□□□ -2.31
PRP16YKR086W RPN6Q12377 434 aa0.59□□□□□ -2.31
PRP16YKR086W HFA1P32874 2273 aa0.59□□□□□ -2.31
PRP16YKR086W YAR023CD6VPM8 179 aa0.59□□□□□ -2.32
PRP16YKR086W CPT1P17898 393 aa0.59□□□□□ -2.32
PRP16YKR086W CCA1P21269 546 aa0.59□□□□□ -2.32
PRP16YKR086W RPB9P27999 122 aa0.59□□□□□ -2.32
PRP16YKR086W MEI4P29467 408 aa0.59□□□□□ -2.32
PRP16YKR086W MAK5P38112 773 aaPredicted RBP0.59□□□□□ -2.32
PRP16YKR086W ARC15P40518 154 aaRIP-Chip data0.59□□□□□ -2.32not detected
PRP16YKR086W GPI14P47088 403 aaKnown RBP0.59□□□□□ -2.32
PRP16YKR086W YJR149WP47177 404 aa0.59□□□□□ -2.32
PRP16YKR086W RMR1P53060 241 aa0.59□□□□□ -2.32
PRP16YKR086W ALG13P53178 202 aa0.59□□□□□ -2.32
PRP16YKR086W YGR219WP53307 113 aa0.59□□□□□ -2.32
PRP16YKR086W DIG2Q03373 323 aaKnown RBP0.59□□□□□ -2.32
PRP16YKR086W ECM18Q04623 453 aa0.59□□□□□ -2.32
PRP16YKR086W NOC4Q06512 552 aaPredicted RBP0.59□□□□□ -2.32
PRP16YKR086W SAS5Q99314 248 aa0.59□□□□□ -2.32
PRP16YKR086W PHO85P17157 305 aa0.59□□□□□ -2.32
PRP16YKR086W DOG2P38773 246 aa0.59□□□□□ -2.32
PRP16YKR086W DOG1P38774 246 aa0.59□□□□□ -2.32
PRP16YKR086W YER085CP40058 173 aa0.59□□□□□ -2.32
PRP16YKR086W YNL200CP40165 246 aaKnown RBP0.59□□□□□ -2.32
PRP16YKR086W ERG10P41338 398 aaKnown RBP0.59□□□□□ -2.32
PRP16YKR086W MIC19P43594 170 aa0.59□□□□□ -2.32
PRP16YKR086W YJL009WP47078 108 aa0.59□□□□□ -2.32
PRP16YKR086W MRPS8Q03799 155 aa0.59□□□□□ -2.32
PRP16YKR086W GRH1Q04410 372 aaKnown RBP0.59□□□□□ -2.32
PRP16YKR086W DXO1Q06349 442 aa0.59□□□□□ -2.32
PRP16YKR086W YLR012CQ07927 99 aa0.59□□□□□ -2.32
PRP16YKR086W PAA1Q12447 191 aaKnown RBP0.59□□□□□ -2.32
PRP16YKR086W SKS1Q12505 502 aa0.59□□□□□ -2.32
PRP16YKR086W YIR021W-AQ3E739 70 aa0.59□□□□□ -2.32
PRP16YKR086W YML100W-AQ8TGT0 57 aa0.59□□□□□ -2.32
PRP16YKR086W SLH1P53327 1967 aaKnown RBP0.58□□□□□ -2.32
PRP16YKR086W SEC16P48415 2195 aaKnown RBP0.58□□□□□ -2.32
PRP16YKR086W YPK2P18961 677 aa0.58□□□□□ -2.32
PRP16YKR086W COX10P21592 462 aa0.58□□□□□ -2.32
PRP16YKR086W OCH1P31755 480 aa0.58□□□□□ -2.32
PRP16YKR086W POP8P38208 133 aa0.58□□□□□ -2.32
PRP16YKR086W MED8P38304 223 aa0.58□□□□□ -2.32
PRP16YKR086W PRS2P38620 318 aaKnown RBP0.58□□□□□ -2.32
PRP16YKR086W YJL028WP47062 111 aa0.58□□□□□ -2.32
PRP16YKR086W ECM19Q06011 112 aa0.58□□□□□ -2.32
PRP16YKR086W DGA1Q08650 418 aa0.58□□□□□ -2.32
PRP16YKR086W YPL162CQ12042 273 aa0.58□□□□□ -2.32
PRP16YKR086W YHR032W-AP0C5N6 59 aa0.58□□□□□ -2.32
PRP16YKR086W OAC1P32332 324 aa0.58□□□□□ -2.32
PRP16YKR086W AGE2P40529 298 aa0.58□□□□□ -2.32
PRP16YKR086W CIN5P40917 295 aa0.58□□□□□ -2.32
PRP16YKR086W UFE1P41834 346 aa0.58□□□□□ -2.32
PRP16YKR086W YCH1P42937 148 aa0.58□□□□□ -2.32
PRP16YKR086W YJL144WP47009 104 aa0.58□□□□□ -2.32
PRP16YKR086W ICS3P47034 131 aa0.58□□□□□ -2.32
PRP16YKR086W SDH7Q04401 133 aa0.58□□□□□ -2.32
PRP16YKR086W VPS68Q12016 184 aa0.58□□□□□ -2.32
PRP16YKR086W YCT1Q12235 531 aa0.58□□□□□ -2.32
PRP16YKR086W PET20Q99373 253 aa0.58□□□□□ -2.32
PRP16YKR086W UBR1P19812 1950 aa0.57□□□□□ -2.32
PRP16YKR086W YHR139C-AO13536 103 aa0.57□□□□□ -2.32
PRP16YKR086W CPA1P07258 411 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W RPL31AP0C2H8 113 aaKnown RBP0.57□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms