RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C TOS8P53147 276 aa7.99□□□□□ -1.13
YSR3YKR053C VPS28Q02767 242 aa7.99□□□□□ -1.13
YSR3YKR053C PBP4Q07362 185 aaKnown RBP7.99□□□□□ -1.13
YSR3YKR053C PRM4Q12498 284 aa7.99□□□□□ -1.13
YSR3YKR053C YHR212W-AP0CX91 67 aa7.98□□□□□ -1.13
YSR3YKR053C MRPL38P35996 138 aaPredicted RBP7.98□□□□□ -1.13
YSR3YKR053C YBR184WP38299 523 aa7.98□□□□□ -1.13
YSR3YKR053C RPL13BP40212 199 aaKnown RBP7.98□□□□□ -1.13
YSR3YKR053C DFG10P40526 253 aa7.98□□□□□ -1.13
YSR3YKR053C VPS71Q03433 280 aa7.98□□□□□ -1.13
YSR3YKR053C RPL13AQ12690 199 aaPredicted RBP7.98□□□□□ -1.13
YSR3YKR053C YBR144CP34215 104 aa7.97□□□□□ -1.13
YSR3YKR053C YPT31P38555 223 aaKnown RBP7.97□□□□□ -1.13
YSR3YKR053C YGR050CP53231 118 aa7.97□□□□□ -1.13
YSR3YKR053C MSO1P53604 210 aaKnown RBP7.97□□□□□ -1.13
YSR3YKR053C YHP1Q04116 353 aa7.97□□□□□ -1.13
YSR3YKR053C SOD1P00445 154 aaKnown RBP7.96□□□□□ -1.14
YSR3YKR053C YGR219WP53307 113 aa7.96□□□□□ -1.14
YSR3YKR053C EST3Q03096 181 aa7.96□□□□□ -1.14
YSR3YKR053C FEX1Q08913 375 aa7.96□□□□□ -1.14
YSR3YKR053C ELO2P25358 347 aa7.95□□□□□ -1.14
YSR3YKR053C ERV1P27882 189 aa7.95□□□□□ -1.14
YSR3YKR053C UTR5P32630 166 aa7.95□□□□□ -1.14
YSR3YKR053C RTC3P38804 111 aaPredicted RBP7.95□□□□□ -1.14
YSR3YKR053C YNL194CP40169 301 aa7.95□□□□□ -1.14
YSR3YKR053C YGR210CP42942 411 aa7.95□□□□□ -1.14
YSR3YKR053C CAB4P53332 305 aa7.95□□□□□ -1.14
YSR3YKR053C TDH1P00360 332 aaKnown RBP7.94□□□□□ -1.14
YSR3YKR053C YPS1P32329 569 aa7.94□□□□□ -1.14
YSR3YKR053C YKL162CP36052 402 aa7.94□□□□□ -1.14
YSR3YKR053C YIR035CP40579 254 aa7.94□□□□□ -1.14
YSR3YKR053C YPS3Q12303 508 aa7.94□□□□□ -1.14
YSR3YKR053C MRS4P23500 304 aa7.93□□□□□ -1.14
YSR3YKR053C NPL6P32832 435 aa7.93□□□□□ -1.14
YSR3YKR053C MIC12P38341 106 aa7.93□□□□□ -1.14
YSR3YKR053C YIF1P53845 314 aaKnown RBP7.93□□□□□ -1.14
YSR3YKR053C YLR224WQ05947 369 aa7.93□□□□□ -1.14
YSR3YKR053C IRC23Q08416 157 aa7.93□□□□□ -1.14
YSR3YKR053C NSA2P40078 261 aaKnown RBP7.92□□□□□ -1.14
YSR3YKR053C CPD1P53314 239 aa7.92□□□□□ -1.14
YSR3YKR053C DYN2Q02647 92 aa7.92□□□□□ -1.14
YSR3YKR053C AIM45Q12480 344 aaKnown RBP7.92□□□□□ -1.14
YSR3YKR053C ISN1Q99312 450 aa7.92□□□□□ -1.14
YSR3YKR053C URA5P13298 226 aaKnown RBP7.91□□□□□ -1.14
YSR3YKR053C DOG2P38773 246 aa7.91□□□□□ -1.14
YSR3YKR053C DOG1P38774 246 aa7.91□□□□□ -1.14
YSR3YKR053C YAR068WP39564 161 aa7.91□□□□□ -1.14
YSR3YKR053C GPI15P53961 229 aa7.91□□□□□ -1.14
YSR3YKR053C YPL264CQ08980 353 aa7.91□□□□□ -1.14
YSR3YKR053C PET494P07390 489 aaPredicted RBP7.9□□□□□ -1.14
YSR3YKR053C SYG1P40528 902 aa7.9□□□□□ -1.14
YSR3YKR053C HCH1P53834 153 aa7.9□□□□□ -1.14
YSR3YKR053C LRS4Q04087 347 aaKnown RBP7.9□□□□□ -1.14
YSR3YKR053C YMR090WQ04304 227 aaKnown RBP7.9□□□□□ -1.14
YSR3YKR053C YLR122CQ12312 125 aa7.9□□□□□ -1.14
YSR3YKR053C SCM3Q12334 223 aa7.9□□□□□ -1.14
YSR3YKR053C SEC22P22214 214 aa7.89□□□□□ -1.15
YSR3YKR053C RTG1P32607 177 aa7.89□□□□□ -1.15
YSR3YKR053C YBL071CP38185 102 aa7.89□□□□□ -1.15
YSR3YKR053C CDS1P38221 457 aa7.89□□□□□ -1.15
YSR3YKR053C WSS1P38838 269 aa7.89□□□□□ -1.15
YSR3YKR053C YMR181CQ03231 154 aa7.89□□□□□ -1.15
YSR3YKR053C FRQ1Q06389 190 aa7.89□□□□□ -1.15
YSR3YKR053C GRX2P17695 143 aaKnown RBP7.88□□□□□ -1.15
YSR3YKR053C HXT14P42833 540 aa7.88□□□□□ -1.15
YSR3YKR053C SWT21P53873 357 aaPredicted RBP7.88□□□□□ -1.15
YSR3YKR053C DCS1Q06151 350 aa7.88□□□□□ -1.15
YSR3YKR053C RRT7Q07829 113 aa7.88□□□□□ -1.15
YSR3YKR053C COA2Q3E823 68 aa7.88□□□□□ -1.15
YSR3YKR053C COX2P00410 251 aa7.87□□□□□ -1.15
YSR3YKR053C TIP1P27654 210 aaPredicted RBP7.87□□□□□ -1.15
YSR3YKR053C RRT1P38192 103 aa7.87□□□□□ -1.15
YSR3YKR053C SLM6P38343 150 aa7.87□□□□□ -1.15
YSR3YKR053C RRF1P38771 230 aa7.87□□□□□ -1.15
YSR3YKR053C MRPL49P40858 161 aaPredicted RBP7.87□□□□□ -1.15
YSR3YKR053C YPI1P43587 155 aa7.87□□□□□ -1.15
YSR3YKR053C PDR17P53844 350 aa7.87□□□□□ -1.15
YSR3YKR053C ACT1P60010 375 aaKnown RBP7.87□□□□□ -1.15
YSR3YKR053C YLR146W-AQ2V2P1 62 aa7.87□□□□□ -1.15
YSR3YKR053C MRS3P10566 314 aa7.86□□□□□ -1.15
YSR3YKR053C FPR2P32472 135 aa7.86□□□□□ -1.15
YSR3YKR053C PPQ1P32945 549 aa7.86□□□□□ -1.15
YSR3YKR053C ECM27P47144 725 aa7.86□□□□□ -1.15
YSR3YKR053C PKP2P53170 491 aa7.86□□□□□ -1.15
YSR3YKR053C YAP1802P53309 568 aa7.86□□□□□ -1.15
YSR3YKR053C NCE103P53615 221 aa7.86□□□□□ -1.15
YSR3YKR053C ERP1Q05359 219 aaKnown RBP7.86□□□□□ -1.15
YSR3YKR053C YOR352WQ08816 343 aa7.86□□□□□ -1.15
YSR3YKR053C PAA1Q12447 191 aaKnown RBP7.86□□□□□ -1.15
YSR3YKR053C CYC3P06182 269 aa7.85□□□□□ -1.15
YSR3YKR053C FCY2P17064 533 aa7.85□□□□□ -1.15
YSR3YKR053C PDC2P32896 925 aa7.85□□□□□ -1.15
YSR3YKR053C SDH4P37298 181 aa7.85□□□□□ -1.15
YSR3YKR053C YEA6P39953 335 aa7.85□□□□□ -1.15
YSR3YKR053C RPA14P50106 137 aa7.85□□□□□ -1.15
YSR3YKR053C RXT3Q07458 294 aa7.85□□□□□ -1.15
YSR3YKR053C POC4Q12245 148 aaPredicted RBP7.85□□□□□ -1.15
YSR3YKR053C CKS1P20486 150 aaKnown RBP7.84□□□□□ -1.15
YSR3YKR053C ACB1P31787 87 aa7.84□□□□□ -1.15
YSR3YKR053C ALK2P32789 676 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms