RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W YHR022CP38763 256 aa2.8□□□□□ -1.96
YJR028WYJR028W MPC3P53311 146 aa2.8□□□□□ -1.96
YJR028WYJR028W CYT2Q00873 224 aa2.8□□□□□ -1.96
YJR028WYJR028W GPI17Q04080 534 aa2.8□□□□□ -1.96
YJR028WYJR028W DYN3Q04949 312 aa2.8□□□□□ -1.96
YJR028WYJR028W MPD1Q12404 318 aaKnown RBP2.8□□□□□ -1.96
YJR028WYJR028W YKL102CP34249 101 aa2.79□□□□□ -1.96
YJR028WYJR028W AIM2P39721 246 aa2.79□□□□□ -1.96
YJR028WYJR028W NUP49Q02199 472 aa2.79□□□□□ -1.96
YJR028WYJR028W HPT1Q04178 221 aaKnown RBP2.79□□□□□ -1.96
YJR028WYJR028W SHH4Q06236 168 aa2.79□□□□□ -1.96
YJR028WYJR028W YOL014WQ08110 124 aa2.79□□□□□ -1.96
YJR028WYJR028W YAR023CD6VPM8 179 aa2.78□□□□□ -1.96
YJR028WYJR028W VTC1P40046 129 aaRIP-Chip data2.78□□□□□ -1.96not detected
YJR028WYJR028W YER134CP40081 178 aa2.78□□□□□ -1.96
YJR028WYJR028W YNL217WP40152 326 aa2.78□□□□□ -1.96
YJR028WYJR028W EAF6P47128 113 aa2.78□□□□□ -1.96
YJR028WYJR028W ERG25P53045 309 aa2.78□□□□□ -1.96
YJR028WYJR028W ATG40Q99325 256 aa2.78□□□□□ -1.96
YJR028WYJR028W POR1P04840 283 aaKnown RBP2.77□□□□□ -1.97
YJR028WYJR028W NRG2P38082 220 aa2.77□□□□□ -1.97
YJR028WYJR028W AGE2P40529 298 aa2.77□□□□□ -1.97
YJR028WYJR028W YFL019CP43576 117 aa2.76□□□□□ -1.97
YJR028WYJR028W YFR054CP43622 192 aa2.76□□□□□ -1.97
YJR028WYJR028W HSK3P69852 69 aa2.76□□□□□ -1.97
YJR028WYJR028W YPR014CQ6B0W2 109 aa2.76□□□□□ -1.97
YJR028WYJR028W YML100W-AQ8TGT0 57 aa2.76□□□□□ -1.97
YJR028WYJR028W SEC14P24280 304 aaKnown RBP2.75□□□□□ -1.97
YJR028WYJR028W FZF1P32805 299 aa2.75□□□□□ -1.97
YJR028WYJR028W TVP38P36164 337 aa2.75□□□□□ -1.97
YJR028WYJR028W TMA22P47089 198 aaPredicted RBP2.75□□□□□ -1.97
YJR028WYJR028W IGO1P53897 168 aa2.75□□□□□ -1.97
YJR028WYJR028W YMR099CQ03161 297 aaKnown RBP2.75□□□□□ -1.97
YJR028WYJR028W PEX11Q12462 236 aa2.75□□□□□ -1.97
YJR028WYJR028W SPO13P23624 291 aa2.74□□□□□ -1.97
YJR028WYJR028W UBC6P33296 250 aaPredicted RBP2.74□□□□□ -1.97
YJR028WYJR028W AME1P38313 324 aa2.74□□□□□ -1.97
YJR028WYJR028W VMA22P38784 181 aa2.74□□□□□ -1.97
YJR028WYJR028W GAA1P39012 614 aa2.74□□□□□ -1.97
YJR028WYJR028W SOL1P50278 321 aa2.74□□□□□ -1.97
YJR028WYJR028W DGK1Q12382 290 aa2.74□□□□□ -1.97
YJR028WYJR028W YLR412C-AQ3E742 68 aa2.74□□□□□ -1.97
YJR028WYJR028W YLR236CA0A023PZG4 107 aa2.73□□□□□ -1.97
YJR028WYJR028W NSG1P38837 291 aa2.73□□□□□ -1.97
YJR028WYJR028W DSE2P38844 325 aa2.73□□□□□ -1.97
YJR028WYJR028W MTW1P39731 289 aa2.73□□□□□ -1.97
YJR028WYJR028W AVT2P39981 480 aa2.73□□□□□ -1.97
YJR028WYJR028W AYR1P40471 297 aa2.73□□□□□ -1.97
YJR028WYJR028W GPI14P47088 403 aaKnown RBP2.73□□□□□ -1.97
YJR028WYJR028W YOR342CQ12182 319 aa2.73□□□□□ -1.97
YJR028WYJR028W QCR2P07257 368 aa2.72□□□□□ -1.97
YJR028WYJR028W PHO85P17157 305 aa2.72□□□□□ -1.97
YJR028WYJR028W YBR209WP38311 105 aa2.72□□□□□ -1.97
YJR028WYJR028W POP3P53833 195 aaPredicted RBP2.72□□□□□ -1.97
YJR028WYJR028W SML1Q04964 104 aa2.72□□□□□ -1.97
YJR028WYJR028W YHR086W-AQ3E746 53 aa2.72□□□□□ -1.97
YJR028WYJR028W CMD1P06787 147 aaKnown RBP2.71□□□□□ -1.98
YJR028WYJR028W TIR1P10863 254 aa2.71□□□□□ -1.98
YJR028WYJR028W YNL200CP40165 246 aaKnown RBP2.71□□□□□ -1.98
YJR028WYJR028W RFC2P40348 353 aa2.71□□□□□ -1.98
YJR028WYJR028W EFM5P53200 248 aaKnown RBP2.71□□□□□ -1.98
YJR028WYJR028W VPS71Q03433 280 aa2.71□□□□□ -1.98
YJR028WYJR028W YLR053CQ12026 108 aa2.71□□□□□ -1.98
YJR028WYJR028W YDL180WQ12301 547 aa2.71□□□□□ -1.98
YJR028WYJR028W RDI1Q12434 202 aa2.71□□□□□ -1.98
YJR028WYJR028W MDH2P22133 377 aa2.7□□□□□ -1.98
YJR028WYJR028W EDC3P39998 551 aaKnown RBP2.7□□□□□ -1.98
YJR028WYJR028W TTI2P47168 421 aa2.7□□□□□ -1.98
YJR028WYJR028W NSL1Q12143 216 aa2.7□□□□□ -1.98
YJR028WYJR028W BOL1Q3E793 110 aa2.7□□□□□ -1.98
YJR028WYJR028W PLP1Q04004 230 aa2.69□□□□□ -1.98
YJR028WYJR028W ERJ5P43613 295 aaPredicted RBP2.68□□□□□ -1.98
YJR028WYJR028W KNH1P50112 268 aa2.68□□□□□ -1.98
YJR028WYJR028W DAS2Q12084 232 aa2.68□□□□□ -1.98
YJR028WYJR028W SEC11P15367 167 aa2.68□□□□□ -1.98
YJR028WYJR028W TFC1P32367 649 aa2.68□□□□□ -1.98
YJR028WYJR028W CPR5P35176 225 aa2.68□□□□□ -1.98
YJR028WYJR028W CSH1P38287 376 aa2.68□□□□□ -1.98
YJR028WYJR028W DER1P38307 211 aa2.68□□□□□ -1.98
YJR028WYJR028W SPC25P40014 221 aa2.68□□□□□ -1.98
YJR028WYJR028W PEP8P40335 379 aa2.68□□□□□ -1.98
YJR028WYJR028W MPA43P53583 542 aaPredicted RBP2.68□□□□□ -1.98
YJR028WYJR028W BUD25P85052 153 aa2.68□□□□□ -1.98
YJR028WYJR028W CUE4Q04201 117 aaPredicted RBP2.68□□□□□ -1.98
YJR028WYJR028W SHH3Q04487 196 aa2.68□□□□□ -1.98
YJR028WYJR028W ANT1Q06497 328 aa2.68□□□□□ -1.98
YJR028WYJR028W FYV12Q08559 129 aa2.68□□□□□ -1.98
YJR028WYJR028W YCR023CP25351 611 aa2.67□□□□□ -1.98
YJR028WYJR028W FYV4P38783 130 aaPredicted RBP2.67□□□□□ -1.98
YJR028WYJR028W YMR295CQ03559 197 aa2.67□□□□□ -1.98
YJR028WYJR028W IRC23Q08416 157 aa2.67□□□□□ -1.98
YJR028WYJR028W ATP20Q12233 115 aa2.67□□□□□ -1.98
YJR028WYJR028W IDP1P21954 428 aaKnown RBP2.66□□□□□ -1.98
YJR028WYJR028W NSA2P40078 261 aaKnown RBP2.66□□□□□ -1.98
YJR028WYJR028W XPT1P47165 209 aa2.66□□□□□ -1.98
YJR028WYJR028W YGL235WP53071 178 aa2.66□□□□□ -1.98
YJR028WYJR028W SAY1P53324 424 aa2.66□□□□□ -1.98
YJR028WYJR028W YMR253CQ04835 414 aa2.66□□□□□ -1.98
YJR028WYJR028W RNH202Q05635 350 aa2.66□□□□□ -1.98
YJR028WYJR028W RAD28Q12021 506 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 141.4 ms