RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C RAD10P06838 210 aa1.53□□□□□ -2.16
TRL1YJL087C ADH3P07246 375 aaKnown RBP1.53□□□□□ -2.16
TRL1YJL087C RPL30P14120 105 aaKnown RBP1.53□□□□□ -2.16
TRL1YJL087C CCA1P21269 546 aa1.53□□□□□ -2.16
TRL1YJL087C SUA7P29055 345 aaPredicted RBP1.53□□□□□ -2.16
TRL1YJL087C NSG1P38837 291 aa1.53□□□□□ -2.16
TRL1YJL087C YAR068WP39564 161 aa1.53□□□□□ -2.16
TRL1YJL087C VTC1P40046 129 aaRIP-Chip data1.53□□□□□ -2.16not detected
TRL1YJL087C GLC8P41818 229 aa1.53□□□□□ -2.16
TRL1YJL087C YFR054CP43622 192 aa1.53□□□□□ -2.16
TRL1YJL087C ALG9P53868 555 aaKnown RBP1.53□□□□□ -2.16
TRL1YJL087C HHT1P61830 136 aa1.53□□□□□ -2.16
TRL1YJL087C YOL014WQ08110 124 aa1.53□□□□□ -2.16
TRL1YJL087C YOR268CQ08734 132 aa1.53□□□□□ -2.16
TRL1YJL087C TIM9O74700 87 aa1.52□□□□□ -2.17
TRL1YJL087C CDC8P00572 216 aa1.52□□□□□ -2.17
TRL1YJL087C YPL073CP40323 161 aa1.52□□□□□ -2.17
TRL1YJL087C ARC15P40518 154 aaRIP-Chip data1.52□□□□□ -2.17not detected
TRL1YJL087C CCC1P47818 322 aa1.52□□□□□ -2.17
TRL1YJL087C YLR412C-AQ3E742 68 aa1.52□□□□□ -2.17
TRL1YJL087C SWR1Q05471 1514 aa1.52□□□□□ -2.17
TRL1YJL087C NUP157P40064 1391 aaKnown RBP1.52□□□□□ -2.17
TRL1YJL087C YOR1P53049 1477 aa1.52□□□□□ -2.17
TRL1YJL087C HSP26P15992 214 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
TRL1YJL087C RPS1AP33442 255 aaKnown RBP1.52□□□□□ -2.17
TRL1YJL087C MRPL17P36528 281 aa1.52□□□□□ -2.17
TRL1YJL087C YBR285WP38354 144 aa1.52□□□□□ -2.17
TRL1YJL087C AIM2P39721 246 aa1.52□□□□□ -2.17
TRL1YJL087C TIF34P40217 347 aaKnown RBP1.52□□□□□ -2.17
TRL1YJL087C PHB1P40961 287 aa1.52□□□□□ -2.17
TRL1YJL087C FIP1P45976 327 aa1.52□□□□□ -2.17
TRL1YJL087C YDR274CP87283 123 aa1.52□□□□□ -2.17
TRL1YJL087C COF1Q03048 143 aaKnown RBP1.52□□□□□ -2.17
TRL1YJL087C DIG2Q03373 323 aaKnown RBP1.52□□□□□ -2.17
TRL1YJL087C FYV4P38783 130 aaPredicted RBP1.51□□□□□ -2.17
TRL1YJL087C GON7P46984 123 aa1.51□□□□□ -2.17
TRL1YJL087C ODC2Q99297 307 aa1.51□□□□□ -2.17
TRL1YJL087C YAR023CD6VPM8 179 aa1.51□□□□□ -2.17
TRL1YJL087C RPC19P28000 142 aaKnown RBP1.51□□□□□ -2.17
TRL1YJL087C YEL045CP32616 141 aa1.51□□□□□ -2.17
TRL1YJL087C UGX2P32772 223 aa1.51□□□□□ -2.17
TRL1YJL087C SHE2P36068 246 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
TRL1YJL087C AVT2P39981 480 aa1.51□□□□□ -2.17
TRL1YJL087C YER134CP40081 178 aa1.51□□□□□ -2.17
TRL1YJL087C YER188WP40103 239 aa1.51□□□□□ -2.17
TRL1YJL087C GVP36P40531 326 aaKnown RBP1.51□□□□□ -2.17
TRL1YJL087C GLR1P41921 483 aaKnown RBP1.51□□□□□ -2.17
TRL1YJL087C YDR366CP87287 132 aa1.51□□□□□ -2.17
TRL1YJL087C YDR278CQ05612 105 aa1.51□□□□□ -2.17
TRL1YJL087C YTH1Q06102 208 aaPredicted RBP1.51□□□□□ -2.17
TRL1YJL087C NEJ1Q06148 342 aa1.51□□□□□ -2.17
TRL1YJL087C YPD1Q07688 167 aa1.51□□□□□ -2.17
TRL1YJL087C TMC1Q08422 150 aaPredicted RBP1.51□□□□□ -2.17
TRL1YJL087C FYV12Q08559 129 aa1.51□□□□□ -2.17
TRL1YJL087C Q0144Q9ZZW2 109 aa1.51□□□□□ -2.17
TRL1YJL087C KOG1P38873 1557 aa1.51□□□□□ -2.17
TRL1YJL087C RPS19AP07280 144 aaKnown RBP1.5□□□□□ -2.17
TRL1YJL087C RPS19BP07281 144 aaPredicted RBP1.5□□□□□ -2.17
TRL1YJL087C ATP5P09457 212 aa1.5□□□□□ -2.17
TRL1YJL087C RSA4P25382 515 aaKnown RBP1.5□□□□□ -2.17
TRL1YJL087C MID2P36027 376 aa1.5□□□□□ -2.17
TRL1YJL087C TRS20P38334 175 aa1.5□□□□□ -2.17
TRL1YJL087C MEP2P41948 499 aa1.5□□□□□ -2.17
TRL1YJL087C VPS71Q03433 280 aa1.5□□□□□ -2.17
TRL1YJL087C FMN1Q03778 218 aa1.5□□□□□ -2.17
TRL1YJL087C SPG3Q04398 127 aaPredicted RBP1.5□□□□□ -2.17
TRL1YJL087C NKP2Q06162 153 aa1.5□□□□□ -2.17
TRL1YJL087C YOR214CQ12282 236 aa1.5□□□□□ -2.17
TRL1YJL087C ATP14Q12349 124 aa1.5□□□□□ -2.17
TRL1YJL087C CCH1P50077 2039 aa1.5□□□□□ -2.17
TRL1YJL087C YHR032W-AP0C5N6 59 aa1.5□□□□□ -2.17
TRL1YJL087C TIR1P10863 254 aa1.5□□□□□ -2.17
TRL1YJL087C PCL1P24867 279 aa1.5□□□□□ -2.17
TRL1YJL087C VMA11P32842 164 aa1.5□□□□□ -2.17
TRL1YJL087C YRA2P36036 203 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
TRL1YJL087C FCY21P40039 528 aa1.5□□□□□ -2.17
TRL1YJL087C YER137CP40083 148 aaKnown RBP1.5□□□□□ -2.17
TRL1YJL087C YER181CP40097 107 aa1.5□□□□□ -2.17
TRL1YJL087C ECO1P43605 281 aa1.5□□□□□ -2.17
TRL1YJL087C DSK2P48510 373 aa1.5□□□□□ -2.17
TRL1YJL087C HAL1Q01766 294 aa1.5□□□□□ -2.17
TRL1YJL087C FRQ1Q06389 190 aa1.5□□□□□ -2.17
TRL1YJL087C SAS5Q99314 248 aa1.5□□□□□ -2.17
TRL1YJL087C TAF2P23255 1407 aa1.5□□□□□ -2.17
TRL1YJL087C RPS1BP23248 255 aaKnown RBP1.49□□□□□ -2.17
TRL1YJL087C PTC1P35182 281 aa1.49□□□□□ -2.17
TRL1YJL087C UMP1P38293 148 aa1.49□□□□□ -2.17
TRL1YJL087C PRE5P40302 234 aaKnown RBP1.49□□□□□ -2.17
TRL1YJL087C PIR5P46999 287 aa1.49□□□□□ -2.17
TRL1YJL087C YGR026WP53217 278 aa1.49□□□□□ -2.17
TRL1YJL087C YGR039WP53225 103 aa1.49□□□□□ -2.17
TRL1YJL087C SLM2P53955 656 aa1.49□□□□□ -2.17
TRL1YJL087C YMR099CQ03161 297 aaKnown RBP1.49□□□□□ -2.17
TRL1YJL087C MCH1Q07376 486 aa1.49□□□□□ -2.17
TRL1YJL087C YPR063CQ12160 140 aa1.49□□□□□ -2.17
TRL1YJL087C ATP20Q12233 115 aa1.49□□□□□ -2.17
TRL1YJL087C YBR056W-AI2HB52 66 aa1.49□□□□□ -2.17
TRL1YJL087C POR1P04840 283 aaKnown RBP1.49□□□□□ -2.17
TRL1YJL087C CPA1P07258 411 aaKnown RBP1.49□□□□□ -2.17
TRL1YJL087C SPT14P32363 452 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms