RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C TY2B-DR1Q12472 1770 aa2.82□□□□□ -1.96
YIR040CYIR040C TY2B-BQ12491 1770 aa2.82□□□□□ -1.96
YIR040CYIR040C TY2B-OR2Q12501 1770 aa2.82□□□□□ -1.96
YIR040CYIR040C TY1B-DR3Q99231 1755 aa2.82□□□□□ -1.96
YIR040CYIR040C YEL009C-AA0A023PZF2 135 aa2.81□□□□□ -1.96
YIR040CYIR040C RIP1P08067 215 aa2.81□□□□□ -1.96
YIR040CYIR040C ARF1P11076 181 aaKnown RBP2.81□□□□□ -1.96
YIR040CYIR040C COX10P21592 462 aa2.81□□□□□ -1.96
YIR040CYIR040C LRE1P25579 583 aaKnown RBP2.81□□□□□ -1.96
YIR040CYIR040C ATG15P25641 520 aa2.81□□□□□ -1.96
YIR040CYIR040C SRP21P32342 167 aa2.81□□□□□ -1.96
YIR040CYIR040C QRI5P32344 111 aa2.81□□□□□ -1.96
YIR040CYIR040C YKL187CP34231 750 aa2.81□□□□□ -1.96
YIR040CYIR040C TMA19P35691 167 aaKnown RBP2.81□□□□□ -1.96
YIR040CYIR040C ATG8P38182 117 aaRIP-Chip data2.81□□□□□ -1.96not detected
YIR040CYIR040C ATG12P38316 186 aa2.81□□□□□ -1.96
YIR040CYIR040C YHR177WP38867 453 aa2.81□□□□□ -1.96
YIR040CYIR040C MET30P39014 640 aa2.81□□□□□ -1.96
YIR040CYIR040C YER079WP40052 210 aaKnown RBP2.81□□□□□ -1.96
YIR040CYIR040C DLS1P40366 167 aa2.81□□□□□ -1.96
YIR040CYIR040C PAM16P42949 149 aa2.81□□□□□ -1.96
YIR040CYIR040C RRT5P43607 289 aa2.81□□□□□ -1.96
YIR040CYIR040C ATG27P46989 271 aa2.81□□□□□ -1.96
YIR040CYIR040C BXI1P48558 297 aa2.81□□□□□ -1.96
YIR040CYIR040C ERG26P53199 349 aaKnown RBP2.81□□□□□ -1.96
YIR040CYIR040C SAY1P53324 424 aa2.81□□□□□ -1.96
YIR040CYIR040C YIF1P53845 314 aaKnown RBP2.81□□□□□ -1.96
YIR040CYIR040C DUG3P53871 357 aa2.81□□□□□ -1.96
YIR040CYIR040C LSM3P57743 89 aaKnown RBP2.81□□□□□ -1.96
YIR040CYIR040C GAS3Q03655 524 aa2.81□□□□□ -1.96
YIR040CYIR040C YPR098CQ06089 161 aa2.81□□□□□ -1.96
YIR040CYIR040C BSP1Q06604 576 aa2.81□□□□□ -1.96
YIR040CYIR040C YPR174CQ06616 221 aaPredicted RBP2.81□□□□□ -1.96
YIR040CYIR040C GPI11Q06636 219 aa2.81□□□□□ -1.96
YIR040CYIR040C TEN1Q07921 160 aa2.81□□□□□ -1.96
YIR040CYIR040C SNX3Q08826 162 aaKnown RBP2.81□□□□□ -1.96
YIR040CYIR040C YGK3Q12222 375 aaPredicted RBP2.81□□□□□ -1.96
YIR040CYIR040C YOR097CQ12274 175 aaPredicted RBP2.81□□□□□ -1.96
YIR040CYIR040C YNR034W-AQ3E841 98 aa2.81□□□□□ -1.96
YIR040CYIR040C TY3B-GQ99315 1547 aa2.81□□□□□ -1.96
YIR040CYIR040C ULS1Q08562 1619 aa2.8□□□□□ -1.96
YIR040CYIR040C SNQ2P32568 1501 aaKnown RBP2.8□□□□□ -1.96
YIR040CYIR040C PDR5P33302 1511 aaKnown RBP2.8□□□□□ -1.96
YIR040CYIR040C INO4P13902 151 aa2.8□□□□□ -1.96
YIR040CYIR040C VMA11P32842 164 aa2.8□□□□□ -1.96
YIR040CYIR040C YBR063CP38083 404 aa2.8□□□□□ -1.96
YIR040CYIR040C ISC1P40015 477 aaKnown RBP2.8□□□□□ -1.96
YIR040CYIR040C YER188WP40103 239 aa2.8□□□□□ -1.96
YIR040CYIR040C PRM5P40476 318 aa2.8□□□□□ -1.96
YIR040CYIR040C OST1P41543 476 aaKnown RBP2.8□□□□□ -1.96
YIR040CYIR040C SFT1P43682 97 aa2.8□□□□□ -1.96
YIR040CYIR040C PRM8P53174 237 aa2.8□□□□□ -1.96
YIR040CYIR040C CLD1P53264 445 aa2.8□□□□□ -1.96
YIR040CYIR040C CAB4P53332 305 aa2.8□□□□□ -1.96
YIR040CYIR040C SMM1P53720 384 aaKnown RBP2.8□□□□□ -1.96
YIR040CYIR040C AAH1P53909 347 aa2.8□□□□□ -1.96
YIR040CYIR040C CYT2Q00873 224 aa2.8□□□□□ -1.96
YIR040CYIR040C VPS71Q03433 280 aa2.8□□□□□ -1.96
YIR040CYIR040C YMR103CQ04436 120 aa2.8□□□□□ -1.96
YIR040CYIR040C ASA1Q06822 443 aa2.8□□□□□ -1.96
YIR040CYIR040C YLR042CQ07990 161 aa2.8□□□□□ -1.96
YIR040CYIR040C YOL131WQ08270 108 aa2.8□□□□□ -1.96
YIR040CYIR040C YPL245WQ12179 454 aaKnown RBP2.8□□□□□ -1.96
YIR040CYIR040C YLR126CQ12288 251 aa2.8□□□□□ -1.96
YIR040CYIR040C VMA9Q3E7B6 73 aa2.8□□□□□ -1.96
YIR040CYIR040C RKR1Q04781 1562 aa2.79□□□□□ -1.96
YIR040CYIR040C PAN1P32521 1480 aa2.79□□□□□ -1.96
YIR040CYIR040C ECM12O13529 151 aa2.79□□□□□ -1.96
YIR040CYIR040C MRPL20P22354 195 aaPredicted RBP2.79□□□□□ -1.96
YIR040CYIR040C PUP3P25451 205 aaKnown RBP2.79□□□□□ -1.96
YIR040CYIR040C ERG24P32462 438 aaKnown RBP2.79□□□□□ -1.96
YIR040CYIR040C UTR5P32630 166 aa2.79□□□□□ -1.96
YIR040CYIR040C COX13P32799 129 aa2.79□□□□□ -1.96
YIR040CYIR040C MSN2P33748 704 aa2.79□□□□□ -1.96
YIR040CYIR040C MRPS5P33759 307 aa2.79□□□□□ -1.96
YIR040CYIR040C MCR1P36060 302 aaKnown RBP2.79□□□□□ -1.96
YIR040CYIR040C FMP46P36141 133 aaKnown RBP2.79□□□□□ -1.96
YIR040CYIR040C MRP21P38175 177 aa2.79□□□□□ -1.96
YIR040CYIR040C TEM1P38987 245 aa2.79□□□□□ -1.96
YIR040CYIR040C MST28P39552 234 aa2.79□□□□□ -1.96
YIR040CYIR040C YJL213WP40896 331 aa2.79□□□□□ -1.96
YIR040CYIR040C ATG18P43601 500 aa2.79□□□□□ -1.96
YIR040CYIR040C ARP3P47117 449 aaKnown RBP2.79□□□□□ -1.96
YIR040CYIR040C HMS2P47175 358 aa2.79□□□□□ -1.96
YIR040CYIR040C YGR219WP53307 113 aa2.79□□□□□ -1.96
YIR040CYIR040C INP1Q03694 420 aa2.79□□□□□ -1.96
YIR040CYIR040C STP3Q05937 343 aa2.79□□□□□ -1.96
YIR040CYIR040C THP1Q08231 455 aa2.79□□□□□ -1.96
YIR040CYIR040C RPS10AQ08745 105 aaPredicted RBP2.79□□□□□ -1.96
YIR040CYIR040C FIT3Q08907 204 aa2.79□□□□□ -1.96
YIR040CYIR040C RFM1Q12192 310 aa2.79□□□□□ -1.96
YIR040CYIR040C MPD1Q12404 318 aaKnown RBP2.79□□□□□ -1.96
YIR040CYIR040C YIL134C-AQ45U18 67 aa2.79□□□□□ -1.96
YIR040CYIR040C YOR338WQ99326 363 aa2.79□□□□□ -1.96
YIR040CYIR040C ESP1Q03018 1630 aa2.79□□□□□ -1.96
YIR040CYIR040C ARO1P08566 1588 aaKnown RBP2.78□□□□□ -1.96
YIR040CYIR040C MBF1O14467 151 aaKnown RBP2.78□□□□□ -1.96
YIR040CYIR040C CPA1P07258 411 aaKnown RBP2.78□□□□□ -1.96
YIR040CYIR040C MRS3P10566 314 aa2.78□□□□□ -1.96
YIR040CYIR040C NOP1P15646 327 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms