RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	LSM3	P57743	89 aa	Known RBP	2.87	□□□□□ -1.95
TMA108	YIL137C	SAE3	P89114	91 aa		2.87	□□□□□ -1.95
TMA108	YIL137C	YPL113C	Q02961	396 aa		2.87	□□□□□ -1.95
TMA108	YIL137C	HRI1	Q05905	244 aa	Known RBP	2.87	□□□□□ -1.95
TMA108	YIL137C	YLR177W	Q06251	628 aa		2.87	□□□□□ -1.95
TMA108	YIL137C	SLO1	Q3E784	85 aa		2.87	□□□□□ -1.95
TMA108	YIL137C	MSI1	P13712	422 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	PTM1	P32857	523 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	PTC1	P35182	281 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	FIP1	P45976	327 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	AVT1	P47082	602 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	TTI2	P47168	421 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	YGR219W	P53307	113 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	BOR1	P53838	576 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	CNL1	Q06333	122 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	FSF1	Q12029	327 aa	Known RBP	2.86	□□□□□ -1.95
TMA108	YIL137C	PSF1	Q12488	208 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	RPS18A	P0CX55	146 aa	Known RBP	2.86	□□□□□ -1.95
TMA108	YIL137C	RPS18B	P0CX56	146 aa	Predicted RBP	2.86	□□□□□ -1.95
TMA108	YIL137C	NSP1	P14907	823 aa	Known RBP	2.86	□□□□□ -1.95
TMA108	YIL137C	TRS65	P32893	560 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	PAN3	P36102	679 aa	Predicted RBP	2.86	□□□□□ -1.95
TMA108	YIL137C	RPL14A	P36105	138 aa	Known RBP	2.86	□□□□□ -1.95
TMA108	YIL137C	POP8	P38208	133 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	RPS20	P38701	121 aa	Known RBP	2.86	□□□□□ -1.95
TMA108	YIL137C	RPL14B	P38754	138 aa	Known RBP	2.86	□□□□□ -1.95
TMA108	YIL137C	SER2	P42941	309 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	YGL088W	P53151	121 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	HHO1	P53551	258 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	TMA23	Q03525	211 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	YLR042C	Q07990	161 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	ATP16	Q12165	160 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	YOR214C	Q12282	236 aa		2.86	□□□□□ -1.95
TMA108	YIL137C	RPL30	P14120	105 aa	Known RBP	2.85	□□□□□ -1.95
TMA108	YIL137C	HRR25	P29295	494 aa	Known RBP	2.85	□□□□□ -1.95
TMA108	YIL137C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	2.85	□□□□□ -1.95	not detected
TMA108	YIL137C	UTP30	P36144	274 aa	Known RBP	2.85	□□□□□ -1.95
TMA108	YIL137C	DLS1	P40366	167 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	GRH1	Q04410	372 aa	Known RBP	2.85	□□□□□ -1.95
TMA108	YIL137C	TFC7	Q12415	435 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	RPL15A	P05748	204 aa	Known RBP	2.85	□□□□□ -1.95
TMA108	YIL137C	STE7	P06784	515 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	YER190C-B	P0CX94	160 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	YEL077W-A	P0CX95	160 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	YGR296C-B	P0CX96	160 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	YPL283W-B	P0CX97	160 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	YPR204C-A	P0CX98	160 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	SNF4	P12904	322 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	RPC19	P28000	142 aa	Known RBP	2.85	□□□□□ -1.95
TMA108	YIL137C	YFR054C	P43622	192 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	MNN5	P46982	586 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	RPL15B	P54780	204 aa	Predicted RBP	2.85	□□□□□ -1.95
TMA108	YIL137C	APS2	Q00381	147 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	VPS71	Q03433	280 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	YET2	Q04210	160 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	TIM22	Q12328	207 aa		2.85	□□□□□ -1.95
TMA108	YIL137C	YFL068W	P0CX99	160 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	YLL066W-A	P0CY00	160 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	YLL067W-A	P0CY01	160 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	MRPL24	P36525	258 aa	Predicted RBP	2.84	□□□□□ -1.95
TMA108	YIL137C	RFS1	P38234	210 aa	Known RBP	2.84	□□□□□ -1.95
TMA108	YIL137C	MAK3	Q03503	176 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	RAV2	Q03956	351 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	YPL245W	Q12179	454 aa	Known RBP	2.84	□□□□□ -1.95
TMA108	YIL137C	VAR1	P02381	398 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	Q0255	P03881	472 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	DDI2	P0CH63	225 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	DDI3	P0CH64	225 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	PHO85	P17157	305 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	OST1	P41543	476 aa	Known RBP	2.84	□□□□□ -1.95
TMA108	YIL137C	YJR085C	P47131	105 aa	Known RBP	2.84	□□□□□ -1.95
TMA108	YIL137C	SNX3	Q08826	162 aa	Known RBP	2.84	□□□□□ -1.95
TMA108	YIL137C	YFR032C-B	Q8TGU2	87 aa		2.84	□□□□□ -1.95
TMA108	YIL137C	MBF1	O14467	151 aa	Known RBP	2.83	□□□□□ -1.96
TMA108	YIL137C	SPS2	P08459	502 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	SPT14	P32363	452 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	SHB17	P36136	271 aa	Known RBP	2.83	□□□□□ -1.96
TMA108	YIL137C	EDC2	P40023	145 aa	Predicted RBP	2.83	□□□□□ -1.96
TMA108	YIL137C	CAT5	P41735	233 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	YDR124W	Q04608	324 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	YLR179C	Q06252	201 aa	Known RBP	2.83	□□□□□ -1.96
TMA108	YIL137C	NAT3	Q06504	195 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	YGL194C-A	Q2V2P6	80 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	HAP2	P06774	265 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	PEX34	P25584	144 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.83	□□□□□ -1.96	not detected
TMA108	YIL137C	PRY2	P36110	329 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	ETR1	P38071	380 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	SHE1	P38200	338 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	RPS12	P48589	143 aa	Known RBP	2.83	□□□□□ -1.96
TMA108	YIL137C	DIE2	P50076	525 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	TDA7	P53882	636 aa	Predicted RBP	2.83	□□□□□ -1.96
TMA108	YIL137C	EMI1	Q04406	187 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	TVP18	Q04767	167 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	ERP1	Q05359	219 aa	Known RBP	2.83	□□□□□ -1.96
TMA108	YIL137C	YDR278C	Q05612	105 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	PCL9	Q12477	304 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	SEC14	P24280	304 aa	Known RBP	2.83	□□□□□ -1.96
TMA108	YIL137C	FYV4	P38783	130 aa	Predicted RBP	2.83	□□□□□ -1.96
TMA108	YIL137C	YER181C	P40097	107 aa		2.83	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms