RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W TEX1P53851 422 aaKnown RBP9.36□□□□□ -0.91
SIM1YIL123W YPS3Q12303 508 aa9.36□□□□□ -0.91
SIM1YIL123W RTC3P38804 111 aaPredicted RBP9.35□□□□□ -0.91
SIM1YIL123W ECM14P38836 430 aa9.35□□□□□ -0.91
SIM1YIL123W YGR269WP40326 108 aa9.35□□□□□ -0.91
SIM1YIL123W YGL258W-AQ3E740 77 aa9.35□□□□□ -0.91
SIM1YIL123W TOR1P35169 2470 aa9.35□□□□□ -0.91
SIM1YIL123W PRP8P33334 2413 aaKnown RBP9.34□□□□□ -0.91
SIM1YIL123W URA5P13298 226 aaKnown RBP9.34□□□□□ -0.91
SIM1YIL123W FCY2P17064 533 aa9.34□□□□□ -0.91
SIM1YIL123W ELO2P25358 347 aa9.34□□□□□ -0.91
SIM1YIL123W SOR1P35497 357 aaKnown RBP9.34□□□□□ -0.91
SIM1YIL123W SGN1P40561 250 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
SIM1YIL123W RPL9BP51401 191 aaKnown RBP9.34□□□□□ -0.91
SIM1YIL123W SOR2Q07786 357 aa9.34□□□□□ -0.91
SIM1YIL123W TY1A-LR4P0C2I8 440 aaKnown RBP9.33□□□□□ -0.92
SIM1YIL123W TY1A-DR6P0CX70 440 aa9.33□□□□□ -0.92
SIM1YIL123W TY1A-ER1P0CX71 440 aa9.33□□□□□ -0.92
SIM1YIL123W TY1A-LR2P0CX72 440 aa9.33□□□□□ -0.92
SIM1YIL123W TY1A-PLP0CX73 440 aa9.33□□□□□ -0.92
SIM1YIL123W TY1A-JR1P0CX74 440 aa9.33□□□□□ -0.92
SIM1YIL123W TY1A-LR3P0CX75 440 aa9.33□□□□□ -0.92
SIM1YIL123W TY1A-ML2P0CX76 440 aa9.33□□□□□ -0.92
SIM1YIL123W SPO13P23624 291 aa9.33□□□□□ -0.92
SIM1YIL123W CDC50P25656 391 aa9.33□□□□□ -0.92
SIM1YIL123W SHB17P36136 271 aaKnown RBP9.33□□□□□ -0.92
SIM1YIL123W HXT14P42833 540 aa9.33□□□□□ -0.92
SIM1YIL123W TY1A-GR1Q12085 440 aa9.33□□□□□ -0.92
SIM1YIL123W USV1Q12132 391 aa9.33□□□□□ -0.92
SIM1YIL123W YPR145C-AQ2V2P0 78 aa9.33□□□□□ -0.92
SIM1YIL123W YOS1Q3E834 85 aa9.33□□□□□ -0.92
SIM1YIL123W TY1A-PR3Q6Q5H1 440 aaKnown RBP9.33□□□□□ -0.92
SIM1YIL123W TY1A-OLQ92392 440 aaKnown RBP9.33□□□□□ -0.92
SIM1YIL123W QCR9P22289 66 aa9.32□□□□□ -0.92
SIM1YIL123W CTR2P38865 189 aa9.32□□□□□ -0.92
SIM1YIL123W YER121WP40076 114 aa9.32□□□□□ -0.92
SIM1YIL123W YFL015CP43578 164 aa9.32□□□□□ -0.92
SIM1YIL123W PAU4P53427 120 aa9.32□□□□□ -0.92
SIM1YIL123W ZEO1Q08245 113 aa9.32□□□□□ -0.92
SIM1YIL123W RPS25BP0C0T4 108 aaKnown RBP9.31□□□□□ -0.92
SIM1YIL123W RPL14AP36105 138 aaKnown RBP9.31□□□□□ -0.92
SIM1YIL123W ATG8P38182 117 aaRIP-Chip data9.31□□□□□ -0.92not detected
SIM1YIL123W RPL14BP38754 138 aaKnown RBP9.31□□□□□ -0.92
SIM1YIL123W DFG10P40526 253 aa9.31□□□□□ -0.92
SIM1YIL123W RIB4P50861 169 aaPredicted RBP9.31□□□□□ -0.92
SIM1YIL123W TIM21P53220 239 aa9.31□□□□□ -0.92
SIM1YIL123W SME1Q12330 94 aaPredicted RBP9.31□□□□□ -0.92
SIM1YIL123W RPS25AQ3E792 108 aaPredicted RBP9.31□□□□□ -0.92
SIM1YIL123W DAL3P32459 195 aa9.31□□□□□ -0.92
SIM1YIL123W SPC29P33419 253 aa9.31□□□□□ -0.92
SIM1YIL123W MTR2P34232 184 aaKnown RBP9.31□□□□□ -0.92
SIM1YIL123W LRS4Q04087 347 aaKnown RBP9.31□□□□□ -0.92
SIM1YIL123W WSC3Q12215 556 aa9.31□□□□□ -0.92
SIM1YIL123W ADH3P07246 375 aaKnown RBP9.3□□□□□ -0.92
SIM1YIL123W ACP1P32463 125 aa9.3□□□□□ -0.92
SIM1YIL123W MRPL4P36517 319 aa9.3□□□□□ -0.92
SIM1YIL123W PHS1P40857 217 aa9.3□□□□□ -0.92
SIM1YIL123W FRQ1Q06389 190 aa9.3□□□□□ -0.92
SIM1YIL123W SNA4Q07549 140 aa9.3□□□□□ -0.92
SIM1YIL123W PAU1P0CE88 120 aa9.29□□□□□ -0.92
SIM1YIL123W PAU14P0CE89 120 aa9.29□□□□□ -0.92
SIM1YIL123W PAU6P0CE90 120 aa9.29□□□□□ -0.92
SIM1YIL123W PAU18P0CE91 120 aa9.29□□□□□ -0.92
SIM1YIL123W PAU8P0CE92 120 aa9.29□□□□□ -0.92
SIM1YIL123W PAU11P0CE93 120 aa9.29□□□□□ -0.92
SIM1YIL123W SPS100P13130 326 aa9.29□□□□□ -0.92
SIM1YIL123W SEC59P20048 519 aa9.29□□□□□ -0.92
SIM1YIL123W YBL059WP34224 193 aa9.29□□□□□ -0.92
SIM1YIL123W ATP3P38077 311 aaKnown RBP9.29□□□□□ -0.92
SIM1YIL123W PAU13P38725 120 aa9.29□□□□□ -0.92
SIM1YIL123W NSA2P40078 261 aaKnown RBP9.29□□□□□ -0.92
SIM1YIL123W MOG1P47123 218 aa9.29□□□□□ -0.92
SIM1YIL123W DYN2Q02647 92 aa9.29□□□□□ -0.92
SIM1YIL123W PAU10Q03050 120 aa9.29□□□□□ -0.92
SIM1YIL123W PML1Q07930 204 aaPredicted RBP9.29□□□□□ -0.92
SIM1YIL123W PAU20Q08322 120 aa9.29□□□□□ -0.92
SIM1YIL123W POC4Q12245 148 aaPredicted RBP9.29□□□□□ -0.92
SIM1YIL123W PAU9Q3E770 120 aa9.29□□□□□ -0.92
SIM1YIL123W APA2P22108 325 aa9.28□□□□□ -0.92
SIM1YIL123W LAC1P28496 418 aa9.28□□□□□ -0.92
SIM1YIL123W YKL187CP34231 750 aa9.28□□□□□ -0.92
SIM1YIL123W WSS1P38838 269 aa9.28□□□□□ -0.92
SIM1YIL123W VMA21P41806 77 aa9.28□□□□□ -0.92
SIM1YIL123W YNR064CP53750 290 aa9.28□□□□□ -0.92
SIM1YIL123W AVO2Q04749 426 aa9.28□□□□□ -0.92
SIM1YIL123W DAL4Q04895 635 aa9.28□□□□□ -0.92
SIM1YIL123W RAX2Q12465 1220 aa9.28□□□□□ -0.92
SIM1YIL123W TRP4P07285 380 aaPredicted RBP9.27□□□□□ -0.93
SIM1YIL123W GTT1P40582 234 aa9.27□□□□□ -0.93
SIM1YIL123W BNS1P50084 137 aa9.27□□□□□ -0.93
SIM1YIL123W YAP1802P53309 568 aa9.27□□□□□ -0.93
SIM1YIL123W SSU72P53538 206 aaPredicted RBP9.27□□□□□ -0.93
SIM1YIL123W SMM1P53720 384 aaKnown RBP9.27□□□□□ -0.93
SIM1YIL123W BOR1P53838 576 aa9.27□□□□□ -0.93
SIM1YIL123W ARR3Q06598 404 aa9.27□□□□□ -0.93
SIM1YIL123W YDL009CQ12210 107 aa9.27□□□□□ -0.93
SIM1YIL123W ERV2Q12284 196 aa9.27□□□□□ -0.93
SIM1YIL123W MRPL33P20084 86 aa9.26□□□□□ -0.93
SIM1YIL123W TCA17P32613 152 aa9.26□□□□□ -0.93
SIM1YIL123W NTF2P33331 125 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms