RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W YGR210CP42942 411 aa8.04□□□□□ -1.12
UBA4YHR111W SSU72P53538 206 aaPredicted RBP8.04□□□□□ -1.12
UBA4YHR111W YGL258W-AQ3E740 77 aa8.04□□□□□ -1.12
UBA4YHR111W ARG80P07249 177 aa8.03□□□□□ -1.12
UBA4YHR111W YHR212W-AP0CX91 67 aa8.03□□□□□ -1.12
UBA4YHR111W MSN1P22148 382 aa8.03□□□□□ -1.12
UBA4YHR111W COX15P40086 486 aa8.03□□□□□ -1.12
UBA4YHR111W TOS8P53147 276 aa8.03□□□□□ -1.12
UBA4YHR111W VPS71Q03433 280 aa8.03□□□□□ -1.12
UBA4YHR111W HED1Q03937 162 aa8.03□□□□□ -1.12
UBA4YHR111W YPS1P32329 569 aa8.03□□□□□ -1.12
UBA4YHR111W NPL6P32832 435 aa8.03□□□□□ -1.12
UBA4YHR111W YPC1P38298 316 aa8.03□□□□□ -1.12
UBA4YHR111W ERG25P53045 309 aa8.03□□□□□ -1.12
UBA4YHR111W EST3Q03096 181 aa8.03□□□□□ -1.12
UBA4YHR111W PRM3Q08931 133 aa8.03□□□□□ -1.12
UBA4YHR111W SOD1P00445 154 aaKnown RBP8.02□□□□□ -1.13
UBA4YHR111W TRP4P07285 380 aaPredicted RBP8.02□□□□□ -1.13
UBA4YHR111W YIR035CP40579 254 aa8.02□□□□□ -1.13
UBA4YHR111W YGR050CP53231 118 aa8.02□□□□□ -1.13
UBA4YHR111W MSO1P53604 210 aaKnown RBP8.02□□□□□ -1.13
UBA4YHR111W IRC23Q08416 157 aa8.02□□□□□ -1.13
UBA4YHR111W URA5P13298 226 aaKnown RBP8.01□□□□□ -1.13
UBA4YHR111W ERV1P27882 189 aa8.01□□□□□ -1.13
UBA4YHR111W RAD28Q12021 506 aa8.01□□□□□ -1.13
UBA4YHR111W YKL162CP36052 402 aa8□□□□□ -1.13
UBA4YHR111W RPL13BP40212 199 aaKnown RBP8□□□□□ -1.13
UBA4YHR111W DYN2Q02647 92 aa8□□□□□ -1.13
UBA4YHR111W YHP1Q04116 353 aa8□□□□□ -1.13
UBA4YHR111W YLR224WQ05947 369 aa8□□□□□ -1.13
UBA4YHR111W RPL13AQ12690 199 aaPredicted RBP8□□□□□ -1.13
UBA4YHR111W YBR144CP34215 104 aa7.99□□□□□ -1.13
UBA4YHR111W COX18P53239 316 aa7.99□□□□□ -1.13
UBA4YHR111W YGR219WP53307 113 aa7.99□□□□□ -1.13
UBA4YHR111W YIF1P53845 314 aaKnown RBP7.99□□□□□ -1.13
UBA4YHR111W YMR181CQ03231 154 aa7.99□□□□□ -1.13
UBA4YHR111W TDH1P00360 332 aaKnown RBP7.98□□□□□ -1.13
UBA4YHR111W RTC3P38804 111 aaPredicted RBP7.98□□□□□ -1.13
UBA4YHR111W NSA2P40078 261 aaKnown RBP7.98□□□□□ -1.13
UBA4YHR111W CPD1P53314 239 aa7.98□□□□□ -1.13
UBA4YHR111W CAB4P53332 305 aa7.98□□□□□ -1.13
UBA4YHR111W AIM45Q12480 344 aaKnown RBP7.98□□□□□ -1.13
UBA4YHR111W ELO2P25358 347 aa7.97□□□□□ -1.13
UBA4YHR111W YAR068WP39564 161 aa7.97□□□□□ -1.13
UBA4YHR111W SYG1P40528 902 aa7.97□□□□□ -1.13
UBA4YHR111W RRT7Q07829 113 aa7.97□□□□□ -1.13
UBA4YHR111W PET494P07390 489 aaPredicted RBP7.96□□□□□ -1.14
UBA4YHR111W SEC22P22214 214 aa7.96□□□□□ -1.14
UBA4YHR111W TIP1P27654 210 aaPredicted RBP7.96□□□□□ -1.14
UBA4YHR111W MIC12P38341 106 aa7.96□□□□□ -1.14
UBA4YHR111W YNL194CP40169 301 aa7.96□□□□□ -1.14
UBA4YHR111W GPI15P53961 229 aa7.96□□□□□ -1.14
UBA4YHR111W YMR090WQ04304 227 aaKnown RBP7.96□□□□□ -1.14
UBA4YHR111W YPL264CQ08980 353 aa7.96□□□□□ -1.14
UBA4YHR111W YPS3Q12303 508 aa7.96□□□□□ -1.14
UBA4YHR111W YLR122CQ12312 125 aa7.96□□□□□ -1.14
UBA4YHR111W SCM3Q12334 223 aa7.96□□□□□ -1.14
UBA4YHR111W COA2Q3E823 68 aa7.96□□□□□ -1.14
UBA4YHR111W UTR5P32630 166 aa7.95□□□□□ -1.14
UBA4YHR111W DOG2P38773 246 aa7.95□□□□□ -1.14
UBA4YHR111W DOG1P38774 246 aa7.95□□□□□ -1.14
UBA4YHR111W WSS1P38838 269 aa7.95□□□□□ -1.14
UBA4YHR111W HCH1P53834 153 aa7.95□□□□□ -1.14
UBA4YHR111W SWT21P53873 357 aaPredicted RBP7.95□□□□□ -1.14
UBA4YHR111W FRQ1Q06389 190 aa7.95□□□□□ -1.14
UBA4YHR111W MRS3P10566 314 aa7.94□□□□□ -1.14
UBA4YHR111W PPQ1P32945 549 aa7.94□□□□□ -1.14
UBA4YHR111W RRF1P38771 230 aa7.94□□□□□ -1.14
UBA4YHR111W NUP42P49686 430 aaKnown RBP7.94□□□□□ -1.14
UBA4YHR111W RPA14P50106 137 aa7.94□□□□□ -1.14
UBA4YHR111W YLR146W-AQ2V2P1 62 aa7.94□□□□□ -1.14
UBA4YHR111W ISN1Q99312 450 aa7.94□□□□□ -1.14
UBA4YHR111W PDC2P32896 925 aa7.93□□□□□ -1.14
UBA4YHR111W YBL071CP38185 102 aa7.93□□□□□ -1.14
UBA4YHR111W CDS1P38221 457 aa7.93□□□□□ -1.14
UBA4YHR111W MRPL49P40858 161 aaPredicted RBP7.93□□□□□ -1.14
UBA4YHR111W PKP2P53170 491 aa7.93□□□□□ -1.14
UBA4YHR111W DCS1Q06151 350 aa7.93□□□□□ -1.14
UBA4YHR111W RXT3Q07458 294 aa7.93□□□□□ -1.14
UBA4YHR111W POC4Q12245 148 aaPredicted RBP7.93□□□□□ -1.14
UBA4YHR111W PAA1Q12447 191 aaKnown RBP7.93□□□□□ -1.14
UBA4YHR111W FCY2P17064 533 aa7.92□□□□□ -1.14
UBA4YHR111W SLM6P38343 150 aa7.92□□□□□ -1.14
UBA4YHR111W IMD2P38697 523 aaKnown RBP7.92□□□□□ -1.14
UBA4YHR111W YEA6P39953 335 aa7.92□□□□□ -1.14
UBA4YHR111W HXT14P42833 540 aa7.92□□□□□ -1.14
UBA4YHR111W PDR17P53844 350 aa7.92□□□□□ -1.14
UBA4YHR111W ACT1P60010 375 aaKnown RBP7.92□□□□□ -1.14
UBA4YHR111W ERP1Q05359 219 aaKnown RBP7.92□□□□□ -1.14
UBA4YHR111W YOR352WQ08816 343 aa7.92□□□□□ -1.14
UBA4YHR111W RRT1P38192 103 aa7.91□□□□□ -1.14
UBA4YHR111W NCE103P53615 221 aa7.91□□□□□ -1.14
UBA4YHR111W GRX2P17695 143 aaKnown RBP7.9□□□□□ -1.14
UBA4YHR111W CKS1P20486 150 aaKnown RBP7.9□□□□□ -1.14
UBA4YHR111W SAR1P20606 190 aaKnown RBP7.9□□□□□ -1.14
UBA4YHR111W ACB1P31787 87 aa7.9□□□□□ -1.14
UBA4YHR111W YPI1P43587 155 aa7.9□□□□□ -1.14
UBA4YHR111W YAP1802P53309 568 aa7.9□□□□□ -1.14
UBA4YHR111W TIM44Q01852 431 aa7.9□□□□□ -1.14
UBA4YHR111W LRS4Q04087 347 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms