RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W YPK2P18961 677 aa0.32□□□□□ -2.36
RPF1YHR088W TRM5P38793 499 aa0.32□□□□□ -2.36
RPF1YHR088W SKI6P46948 246 aaPredicted RBP0.32□□□□□ -2.36
RPF1YHR088W ADO1P47143 340 aaKnown RBP0.32□□□□□ -2.36
RPF1YHR088W YMR295CQ03559 197 aa0.32□□□□□ -2.36
RPF1YHR088W YAR023CD6VPM8 179 aa0.31□□□□□ -2.36
RPF1YHR088W AHT1P29589 182 aa0.31□□□□□ -2.36
RPF1YHR088W MAK5P38112 773 aaPredicted RBP0.31□□□□□ -2.36
RPF1YHR088W YHL037CP38733 133 aa0.31□□□□□ -2.36
RPF1YHR088W GGA1Q06336 557 aa0.31□□□□□ -2.36
RPF1YHR088W ABP140Q08641 628 aaKnown RBP0.31□□□□□ -2.36
RPF1YHR088W YPR013CQ12145 317 aa0.31□□□□□ -2.36
RPF1YHR088W MDM32Q12171 622 aa0.31□□□□□ -2.36
RPF1YHR088W NCB2Q92317 146 aa0.31□□□□□ -2.36
RPF1YHR088W MER1P16523 270 aa0.3□□□□□ -2.36
RPF1YHR088W CNB1P25296 175 aa0.3□□□□□ -2.36
RPF1YHR088W BMH2P34730 273 aaKnown RBP0.3□□□□□ -2.36
RPF1YHR088W MET31Q03081 177 aa0.3□□□□□ -2.36
RPF1YHR088W FYV12Q08559 129 aa0.3□□□□□ -2.36
RPF1YHR088W TAR1Q8TGM6 124 aa0.3□□□□□ -2.36
RPF1YHR088W PPA2P28239 310 aa0.29□□□□□ -2.36
RPF1YHR088W ERG28P40030 148 aa0.29□□□□□ -2.36
RPF1YHR088W YFL051CP43552 160 aa0.29□□□□□ -2.36
RPF1YHR088W DCV1P43595 202 aa0.29□□□□□ -2.36
RPF1YHR088W SHH3Q04487 196 aa0.29□□□□□ -2.36
RPF1YHR088W GET4Q12125 312 aa0.29□□□□□ -2.36
RPF1YHR088W GSP2P32836 220 aaKnown RBP0.28□□□□□ -2.36
RPF1YHR088W YAR064WP39563 99 aa0.28□□□□□ -2.36
RPF1YHR088W AIM2P39721 246 aa0.28□□□□□ -2.36
RPF1YHR088W MTW1P39731 289 aa0.28□□□□□ -2.36
RPF1YHR088W SER2P42941 309 aa0.28□□□□□ -2.36
RPF1YHR088W YNL033WP53964 284 aa0.28□□□□□ -2.36
RPF1YHR088W YCR087C-AP37263 153 aa0.27□□□□□ -2.37
RPF1YHR088W GCN20P43535 752 aaKnown RBP0.27□□□□□ -2.37
RPF1YHR088W OTU1P43558 301 aa0.27□□□□□ -2.37
RPF1YHR088W VPS71Q03433 280 aa0.27□□□□□ -2.37
RPF1YHR088W FIT1Q04433 528 aa0.27□□□□□ -2.37
RPF1YHR088W ARP3P47117 449 aaKnown RBP0.26□□□□□ -2.37
RPF1YHR088W SED1Q01589 338 aa0.26□□□□□ -2.37
RPF1YHR088W YMR099CQ03161 297 aaKnown RBP0.26□□□□□ -2.37
RPF1YHR088W FUS2Q05670 677 aa0.26□□□□□ -2.37
RPF1YHR088W PST2Q12335 198 aaKnown RBP0.26□□□□□ -2.37
RPF1YHR088W NHP6BP11633 99 aaKnown RBP0.25□□□□□ -2.37
RPF1YHR088W SNF4P12904 322 aa0.25□□□□□ -2.37
RPF1YHR088W YCR023CP25351 611 aa0.25□□□□□ -2.37
RPF1YHR088W MGT1P26188 188 aa0.25□□□□□ -2.37
RPF1YHR088W TAF14P35189 244 aa0.25□□□□□ -2.37
RPF1YHR088W PAM17P36147 197 aa0.25□□□□□ -2.37
RPF1YHR088W YNL194CP40169 301 aa0.25□□□□□ -2.37
RPF1YHR088W YJR015WP47090 510 aa0.25□□□□□ -2.37
RPF1YHR088W RRP17Q04031 235 aaPredicted RBP0.25□□□□□ -2.37
RPF1YHR088W YDR157WA0A023PZE8 133 aa0.24□□□□□ -2.37
RPF1YHR088W SPS18P32572 300 aa0.24□□□□□ -2.37
RPF1YHR088W YBL010CP32788 280 aa0.24□□□□□ -2.37
RPF1YHR088W ETR1P38071 380 aa0.24□□□□□ -2.37
RPF1YHR088W RTR1P40084 226 aaPredicted RBP0.24□□□□□ -2.37
RPF1YHR088W PDS1P40316 373 aaPredicted RBP0.24□□□□□ -2.37
RPF1YHR088W CUP9P41817 306 aa0.24□□□□□ -2.37
RPF1YHR088W CWC23P52868 283 aaPredicted RBP0.24□□□□□ -2.37
RPF1YHR088W MBF1O14467 151 aaKnown RBP0.23□□□□□ -2.37
RPF1YHR088W TIR1P10863 254 aa0.23□□□□□ -2.37
RPF1YHR088W STF2P16965 84 aa0.23□□□□□ -2.37
RPF1YHR088W STE18P18852 110 aa0.23□□□□□ -2.37
RPF1YHR088W ASF2P32448 525 aaPredicted RBP0.23□□□□□ -2.37
RPF1YHR088W YJR111CP47148 283 aaKnown RBP0.23□□□□□ -2.37
RPF1YHR088W YMR315WQ04869 349 aaKnown RBP0.23□□□□□ -2.37
RPF1YHR088W YLR036CQ07986 203 aa0.23□□□□□ -2.37
RPF1YHR088W YOR015WQ12169 119 aa0.23□□□□□ -2.37
RPF1YHR088W IDP1P21954 428 aaKnown RBP0.22□□□□□ -2.37
RPF1YHR088W PRP18P33411 251 aaPredicted RBP0.22□□□□□ -2.37
RPF1YHR088W MPM1P40364 252 aa0.22□□□□□ -2.37
RPF1YHR088W RAD17P48581 401 aa0.22□□□□□ -2.37
RPF1YHR088W SBH2P52871 88 aa0.22□□□□□ -2.37
RPF1YHR088W TMA23Q03525 211 aa0.22□□□□□ -2.37
RPF1YHR088W YMR253CQ04835 414 aa0.22□□□□□ -2.37
RPF1YHR088W NAT3Q06504 195 aa0.22□□□□□ -2.37
RPF1YHR088W PRM3Q08931 133 aa0.22□□□□□ -2.37
RPF1YHR088W ADF1Q2V2Q1 113 aa0.22□□□□□ -2.37
RPF1YHR088W CDC33P07260 213 aaKnown RBP0.21□□□□□ -2.38
RPF1YHR088W CBT1P36038 271 aaPredicted RBP0.21□□□□□ -2.38
RPF1YHR088W FMP23P38231 175 aa0.21□□□□□ -2.38
RPF1YHR088W IKI1P38874 309 aa0.21□□□□□ -2.38
RPF1YHR088W SPC25P40014 221 aa0.21□□□□□ -2.38
RPF1YHR088W YLR031WQ07978 186 aa0.21□□□□□ -2.38
RPF1YHR088W RFC4P40339 323 aaKnown RBP0.2□□□□□ -2.38
RPF1YHR088W TDA4P47153 279 aa0.2□□□□□ -2.38
RPF1YHR088W YGL235WP53071 178 aa0.2□□□□□ -2.38
RPF1YHR088W ELP6Q04868 273 aa0.2□□□□□ -2.38
RPF1YHR088W YOL014WQ08110 124 aa0.2□□□□□ -2.38
RPF1YHR088W YMR030W-AQ3E760 96 aa0.2□□□□□ -2.38
RPF1YHR088W COQ1P18900 473 aa0.19□□□□□ -2.38
RPF1YHR088W YKR070WP36151 352 aaKnown RBP0.19□□□□□ -2.38
RPF1YHR088W TMA22P47089 198 aaPredicted RBP0.19□□□□□ -2.38
RPF1YHR088W DGK1Q12382 290 aa0.19□□□□□ -2.38
RPF1YHR088W MAK31P23059 88 aa0.18□□□□□ -2.38
RPF1YHR088W NSE4P43124 402 aa0.18□□□□□ -2.38
RPF1YHR088W YHP1Q04116 353 aa0.18□□□□□ -2.38
RPF1YHR088W KEI1Q06346 221 aa0.18□□□□□ -2.38
RPF1YHR088W YML100W-AQ8TGT0 57 aa0.18□□□□□ -2.38
RPF1YHR088W MRS1P07266 363 aa0.17□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms