RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W YMR090WQ04304 227 aaKnown RBP5.09□□□□□ -1.59
RPN11YFR004W YDL242WQ07746 117 aa5.09□□□□□ -1.59
RPN11YFR004W PML1Q07930 204 aaPredicted RBP5.09□□□□□ -1.59
RPN11YFR004W RFU1Q08003 200 aa5.09□□□□□ -1.59
RPN11YFR004W YOL118CQ08259 102 aa5.09□□□□□ -1.59
RPN11YFR004W SWT1Q12104 458 aa5.09□□□□□ -1.59
RPN11YFR004W FRE8Q12209 686 aa5.09□□□□□ -1.59
RPN11YFR004W AGC1Q12482 902 aa5.09□□□□□ -1.59
RPN11YFR004W YPR108W-AQ3E7B3 70 aa5.09□□□□□ -1.59
RPN11YFR004W URA2P07259 2214 aaKnown RBP5.08□□□□□ -1.6
RPN11YFR004W YLR302CO13544 120 aa5.08□□□□□ -1.6
RPN11YFR004W MSI1P13712 422 aa5.08□□□□□ -1.6
RPN11YFR004W APA2P22108 325 aa5.08□□□□□ -1.6
RPN11YFR004W YCR101CP25607 182 aa5.08□□□□□ -1.6
RPN11YFR004W NTF2P33331 125 aaKnown RBP5.08□□□□□ -1.6
RPN11YFR004W MRPS5P33759 307 aa5.08□□□□□ -1.6
RPN11YFR004W SLM6P38343 150 aa5.08□□□□□ -1.6
RPN11YFR004W FLX1P40464 311 aa5.08□□□□□ -1.6
RPN11YFR004W YFL051CP43552 160 aa5.08□□□□□ -1.6
RPN11YFR004W YNR066CP53752 436 aa5.08□□□□□ -1.6
RPN11YFR004W RAF1Q06891 181 aa5.08□□□□□ -1.6
RPN11YFR004W YPD1Q07688 167 aa5.08□□□□□ -1.6
RPN11YFR004W RAD28Q12021 506 aa5.08□□□□□ -1.6
RPN11YFR004W YDL180WQ12301 547 aa5.08□□□□□ -1.6
RPN11YFR004W ATG5Q12380 294 aa5.08□□□□□ -1.6
RPN11YFR004W MPD1Q12404 318 aaKnown RBP5.08□□□□□ -1.6
RPN11YFR004W IZH2Q12442 317 aa5.08□□□□□ -1.6
RPN11YFR004W SPS4P09937 338 aa5.07□□□□□ -1.6
RPN11YFR004W YCR025CP25352 136 aa5.07□□□□□ -1.6
RPN11YFR004W IMP1P28627 190 aa5.07□□□□□ -1.6
RPN11YFR004W YKL187CP34231 750 aa5.07□□□□□ -1.6
RPN11YFR004W MRPL4P36517 319 aa5.07□□□□□ -1.6
RPN11YFR004W YBR096WP38256 230 aa5.07□□□□□ -1.6
RPN11YFR004W YIL029CP40538 142 aa5.07□□□□□ -1.6
RPN11YFR004W DAN1P47178 298 aa5.07□□□□□ -1.6
RPN11YFR004W TIM21P53220 239 aa5.07□□□□□ -1.6
RPN11YFR004W YPL108WQ02872 168 aaPredicted RBP5.07□□□□□ -1.6
RPN11YFR004W YAP6Q03935 383 aa5.07□□□□□ -1.6
RPN11YFR004W FSH2Q05015 223 aa5.07□□□□□ -1.6
RPN11YFR004W TMC1Q08422 150 aaPredicted RBP5.07□□□□□ -1.6
RPN11YFR004W DGK1Q12382 290 aa5.07□□□□□ -1.6
RPN11YFR004W SPO24Q3E752 67 aa5.07□□□□□ -1.6
RPN11YFR004W ATG40Q99325 256 aa5.07□□□□□ -1.6
RPN11YFR004W ADH3P07246 375 aaKnown RBP5.06□□□□□ -1.6
RPN11YFR004W SPO13P23624 291 aa5.06□□□□□ -1.6
RPN11YFR004W ERV1P27882 189 aa5.06□□□□□ -1.6
RPN11YFR004W LAC1P28496 418 aa5.06□□□□□ -1.6
RPN11YFR004W CLB6P32943 380 aa5.06□□□□□ -1.6
RPN11YFR004W UPS2P35200 230 aa5.06□□□□□ -1.6
RPN11YFR004W YNK1P36010 153 aaKnown RBP5.06□□□□□ -1.6
RPN11YFR004W RPL14AP36105 138 aaKnown RBP5.06□□□□□ -1.6
RPN11YFR004W MRPL39P36533 70 aa5.06□□□□□ -1.6
RPN11YFR004W SDH4P37298 181 aa5.06□□□□□ -1.6
RPN11YFR004W YBR292CP38357 123 aa5.06□□□□□ -1.6
RPN11YFR004W PRS2P38620 318 aaKnown RBP5.06□□□□□ -1.6
RPN11YFR004W RPL14BP38754 138 aaKnown RBP5.06□□□□□ -1.6
RPN11YFR004W MTC6P38849 526 aa5.06□□□□□ -1.6
RPN11YFR004W YIL012WP40551 113 aa5.06□□□□□ -1.6
RPN11YFR004W OST1P41543 476 aaKnown RBP5.06□□□□□ -1.6
RPN11YFR004W TAX4P47030 604 aa5.06□□□□□ -1.6
RPN11YFR004W YFH1Q07540 174 aa5.06□□□□□ -1.6
RPN11YFR004W FCY22Q12119 530 aa5.06□□□□□ -1.6
RPN11YFR004W PRR2Q12310 699 aa5.06□□□□□ -1.6
RPN11YFR004W LAS17Q12446 633 aa5.06□□□□□ -1.6
RPN11YFR004W POF1P25576 258 aa5.05□□□□□ -1.6
RPN11YFR004W CDC50P25656 391 aa5.05□□□□□ -1.6
RPN11YFR004W YBR013CP38215 129 aa5.05□□□□□ -1.6
RPN11YFR004W PCL7P40186 285 aa5.05□□□□□ -1.6
RPN11YFR004W CCS1P40202 249 aaKnown RBP5.05□□□□□ -1.6
RPN11YFR004W RTS2P40962 232 aa5.05□□□□□ -1.6
RPN11YFR004W HXT14P42833 540 aa5.05□□□□□ -1.6
RPN11YFR004W YGL262WP53054 175 aa5.05□□□□□ -1.6
RPN11YFR004W CGR1P53188 120 aa5.05□□□□□ -1.6
RPN11YFR004W FYV6P53913 173 aa5.05□□□□□ -1.6
RPN11YFR004W YPL077CQ02831 240 aa5.05□□□□□ -1.6
RPN11YFR004W DPB4Q04603 196 aaKnown RBP5.05□□□□□ -1.6
RPN11YFR004W RIM9Q04734 239 aa5.05□□□□□ -1.6
RPN11YFR004W YMR254CQ04838 102 aa5.05□□□□□ -1.6
RPN11YFR004W PIN3Q06449 215 aa5.05□□□□□ -1.6
RPN11YFR004W SME1Q12330 94 aaPredicted RBP5.05□□□□□ -1.6
RPN11YFR004W GEP5Q12393 293 aa5.05□□□□□ -1.6
RPN11YFR004W YBR255C-AQ3E776 120 aa5.05□□□□□ -1.6
RPN11YFR004W POP5P28005 173 aa5.04□□□□□ -1.6
RPN11YFR004W YUH1P35127 236 aa5.04□□□□□ -1.6
RPN11YFR004W NTC20P38302 140 aaPredicted RBP5.04□□□□□ -1.6
RPN11YFR004W SLM1P40485 686 aa5.04□□□□□ -1.6
RPN11YFR004W XPT1P47165 209 aa5.04□□□□□ -1.6
RPN11YFR004W BNS1P50084 137 aa5.04□□□□□ -1.6
RPN11YFR004W ERG25P53045 309 aa5.04□□□□□ -1.6
RPN11YFR004W GEP7P53171 287 aa5.04□□□□□ -1.6
RPN11YFR004W SMM1P53720 384 aaKnown RBP5.04□□□□□ -1.6
RPN11YFR004W RCE1Q03530 315 aa5.04□□□□□ -1.6
RPN11YFR004W YPR098CQ06089 161 aa5.04□□□□□ -1.6
RPN11YFR004W RXT3Q07458 294 aa5.04□□□□□ -1.6
RPN11YFR004W PAM18Q07914 168 aa5.04□□□□□ -1.6
RPN11YFR004W IZH3Q07959 543 aa5.04□□□□□ -1.6
RPN11YFR004W YOL029CQ08187 201 aa5.04□□□□□ -1.6
RPN11YFR004W YOR292CQ08743 309 aa5.04□□□□□ -1.6
RPN11YFR004W YPL264CQ08980 353 aa5.04□□□□□ -1.6
RPN11YFR004W USV1Q12132 391 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms