RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C HMLALPHA2P0CY09 210 aa2.72□□□□□ -1.97
RTN1YDR233C CBF1P17106 351 aa2.72□□□□□ -1.97
RTN1YDR233C DSE2P38844 325 aa2.72□□□□□ -1.97
RTN1YDR233C RMD6P39975 231 aa2.72□□□□□ -1.97
RTN1YDR233C LSM4P40070 187 aaKnown RBP2.72□□□□□ -1.97
RTN1YDR233C MRPS17Q03246 237 aaPredicted RBP2.72□□□□□ -1.97
RTN1YDR233C TSC3Q3E790 80 aa2.72□□□□□ -1.97
RTN1YDR233C YFR032C-BQ8TGU2 87 aa2.72□□□□□ -1.97
RTN1YDR233C KRE5P22023 1365 aa2.72□□□□□ -1.97
RTN1YDR233C CYR1P08678 2026 aaKnown RBP2.71□□□□□ -1.98
RTN1YDR233C PDR18P53756 1333 aa2.71□□□□□ -1.98
RTN1YDR233C TIM9O74700 87 aa2.71□□□□□ -1.98
RTN1YDR233C MRPS28P21771 286 aa2.71□□□□□ -1.98
RTN1YDR233C YNR077CP53758 84 aa2.71□□□□□ -1.98
RTN1YDR233C COG5P53951 403 aa2.71□□□□□ -1.98
RTN1YDR233C YMR226CQ05016 267 aaKnown RBP2.71□□□□□ -1.98
RTN1YDR233C GGA1Q06336 557 aa2.71□□□□□ -1.98
RTN1YDR233C GET4Q12125 312 aa2.71□□□□□ -1.98
RTN1YDR233C BCK1Q01389 1478 aa2.71□□□□□ -1.98
RTN1YDR233C RAD9P14737 1309 aa2.7□□□□□ -1.98
RTN1YDR233C KSS1P14681 368 aa2.7□□□□□ -1.98
RTN1YDR233C MDH2P22133 377 aa2.7□□□□□ -1.98
RTN1YDR233C NOP19P53317 196 aaPredicted RBP2.7□□□□□ -1.98
RTN1YDR233C YOL160WQ08321 113 aa2.7□□□□□ -1.98
RTN1YDR233C ABP140Q08641 628 aaKnown RBP2.7□□□□□ -1.98
RTN1YDR233C SKG1P36169 355 aa2.69□□□□□ -1.98
RTN1YDR233C UMP1P38293 148 aa2.69□□□□□ -1.98
RTN1YDR233C AST2P39945 430 aaKnown RBP2.69□□□□□ -1.98
RTN1YDR233C QCR7P00128 127 aa2.68□□□□□ -1.98
RTN1YDR233C AVT2P39981 480 aa2.68□□□□□ -1.98
RTN1YDR233C GVP36P40531 326 aaKnown RBP2.68□□□□□ -1.98
RTN1YDR233C YFR054CP43622 192 aa2.68□□□□□ -1.98
RTN1YDR233C CGR1P53188 120 aa2.68□□□□□ -1.98
RTN1YDR233C SML1Q04964 104 aa2.68□□□□□ -1.98
RTN1YDR233C YLR419WQ06698 1435 aaKnown RBP2.68□□□□□ -1.98
RTN1YDR233C TY3B-IQ7LHG5 1498 aaKnown RBP2.67□□□□□ -1.98
RTN1YDR233C RPL25P04456 142 aaKnown RBP2.67□□□□□ -1.98
RTN1YDR233C RPB3P16370 318 aaKnown RBP2.67□□□□□ -1.98
RTN1YDR233C MAG1P22134 296 aaKnown RBP2.67□□□□□ -1.98
RTN1YDR233C TRM5P38793 499 aa2.67□□□□□ -1.98
RTN1YDR233C YNL217WP40152 326 aa2.67□□□□□ -1.98
RTN1YDR233C TY1B-NL2Q99337 1749 aaKnown RBP2.66□□□□□ -1.98
RTN1YDR233C URA5P13298 226 aaKnown RBP2.66□□□□□ -1.98
RTN1YDR233C ATP15P21306 62 aa2.66□□□□□ -1.98
RTN1YDR233C BET1P22804 142 aa2.66□□□□□ -1.98
RTN1YDR233C FZF1P32805 299 aa2.66□□□□□ -1.98
RTN1YDR233C AIM25P47140 327 aa2.66□□□□□ -1.98
RTN1YDR233C GET1P53192 235 aa2.66□□□□□ -1.98
RTN1YDR233C YET1P35723 206 aa2.65□□□□□ -1.99
RTN1YDR233C VTC1P40046 129 aaRIP-Chip data2.65□□□□□ -1.99not detected
RTN1YDR233C MDM32Q12171 622 aa2.65□□□□□ -1.99
RTN1YDR233C NUP192P47054 1683 aa2.65□□□□□ -1.99
RTN1YDR233C SNC2P33328 115 aa2.64□□□□□ -1.99
RTN1YDR233C HMF1P40037 129 aaKnown RBP2.64□□□□□ -1.99
RTN1YDR233C ERG10P41338 398 aaKnown RBP2.64□□□□□ -1.99
RTN1YDR233C EAF6P47128 113 aa2.64□□□□□ -1.99
RTN1YDR233C GPM2Q12008 311 aa2.64□□□□□ -1.99
RTN1YDR233C FSF1Q12029 327 aaKnown RBP2.64□□□□□ -1.99
RTN1YDR233C YPK2P18961 677 aa2.63□□□□□ -1.99
RTN1YDR233C YBR219CP38317 127 aa2.63□□□□□ -1.99
RTN1YDR233C YER135CP40082 130 aa2.63□□□□□ -1.99
RTN1YDR233C MMS2P53152 137 aa2.63□□□□□ -1.99
RTN1YDR233C BUD25P85052 153 aa2.63□□□□□ -1.99
RTN1YDR233C ADE6P38972 1358 aaKnown RBP2.62□□□□□ -1.99
RTN1YDR233C APA2P22108 325 aa2.62□□□□□ -1.99
RTN1YDR233C GAA1P39012 614 aa2.62□□□□□ -1.99
RTN1YDR233C YDR274CP87283 123 aa2.62□□□□□ -1.99
RTN1YDR233C CPA1P07258 411 aaKnown RBP2.61□□□□□ -1.99
RTN1YDR233C MRS1P07266 363 aa2.61□□□□□ -1.99
RTN1YDR233C YBR285WP38354 144 aa2.6□□□□□ -1.99
RTN1YDR233C YLR162WQ06235 118 aa2.6□□□□□ -1.99
RTN1YDR233C FLO9P39712 1322 aa2.6□□□□□ -1.99
RTN1YDR233C SIR2P06700 562 aa2.59□□□□□ -1.99
RTN1YDR233C RPL27AP0C2H6 136 aaKnown RBP2.59□□□□□ -1.99
RTN1YDR233C RPS24AP0CX31 135 aaKnown RBP2.59□□□□□ -1.99
RTN1YDR233C RPS24BP0CX32 135 aaKnown RBP2.59□□□□□ -1.99
RTN1YDR233C CNB1P25296 175 aa2.59□□□□□ -1.99
RTN1YDR233C ADE1P27616 306 aa2.59□□□□□ -1.99
RTN1YDR233C ASF2P32448 525 aaPredicted RBP2.59□□□□□ -1.99
RTN1YDR233C UBR2Q07963 1872 aa2.58□□□□□ -2
RTN1YDR233C OCH1P31755 480 aa2.58□□□□□ -2
RTN1YDR233C HNT1Q04344 158 aaKnown RBP2.58□□□□□ -2
RTN1YDR233C CSI2Q08054 341 aa2.58□□□□□ -2
RTN1YDR233C ATG40Q99325 256 aa2.58□□□□□ -2
RTN1YDR233C USO1P25386 1790 aa2.57□□□□□ -2
RTN1YDR233C YKR045CP36138 183 aa2.57□□□□□ -2
RTN1YDR233C OPY1P38271 328 aa2.57□□□□□ -2
RTN1YDR233C RSF2P46974 1380 aa2.57□□□□□ -2
RTN1YDR233C FAS1P07149 2051 aaKnown RBP2.57□□□□□ -2
RTN1YDR233C CKS1P20486 150 aaKnown RBP2.56□□□□□ -2
RTN1YDR233C SHE2P36068 246 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
RTN1YDR233C GLE2P40066 365 aa2.56□□□□□ -2
RTN1YDR233C MPC3P53311 146 aa2.56□□□□□ -2
RTN1YDR233C POP3P53833 195 aaPredicted RBP2.56□□□□□ -2
RTN1YDR233C RPO41P13433 1351 aaKnown RBP2.56□□□□□ -2
RTN1YDR233C MBF1O14467 151 aaKnown RBP2.55□□□□□ -2
RTN1YDR233C ARP3P47117 449 aaKnown RBP2.55□□□□□ -2
RTN1YDR233C ROM2P51862 1356 aaKnown RBP2.55□□□□□ -2
RTN1YDR233C YNL184CP53876 108 aa2.55□□□□□ -2
RTN1YDR233C ARO80Q04052 950 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms