RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C YFL051CP43552 160 aa0.1□□□□□ -2.39
PCF11YDR228C YKL183C-AQ3E765 70 aa0.1□□□□□ -2.39
PCF11YDR228C CFT1Q06632 1357 aaKnown RBP0.1□□□□□ -2.39
PCF11YDR228C YAR023CD6VPM8 179 aa0.1□□□□□ -2.39
PCF11YDR228C RPL24BP24000 155 aaKnown RBP0.1□□□□□ -2.39
PCF11YDR228C YCR090CP25654 182 aaKnown RBP0.1□□□□□ -2.39
PCF11YDR228C YER085CP40058 173 aa0.1□□□□□ -2.39
PCF11YDR228C PST2Q12335 198 aaKnown RBP0.1□□□□□ -2.39
PCF11YDR228C CNB1P25296 175 aa0.09□□□□□ -2.4
PCF11YDR228C BMH2P34730 273 aaKnown RBP0.09□□□□□ -2.4
PCF11YDR228C DCV1P43595 202 aa0.09□□□□□ -2.4
PCF11YDR228C SKI6P46948 246 aaPredicted RBP0.09□□□□□ -2.4
PCF11YDR228C SED1Q01589 338 aa0.09□□□□□ -2.4
PCF11YDR228C JLP1Q12358 412 aa0.09□□□□□ -2.4
PCF11YDR228C YBR121C-AP0C5L4 52 aa0.08□□□□□ -2.4
PCF11YDR228C MER1P16523 270 aa0.08□□□□□ -2.4
PCF11YDR228C GCN20P43535 752 aaKnown RBP0.08□□□□□ -2.4
PCF11YDR228C ADO1P47143 340 aaKnown RBP0.08□□□□□ -2.4
PCF11YDR228C SHH3Q04487 196 aa0.08□□□□□ -2.4
PCF11YDR228C YAR064WP39563 99 aa0.07□□□□□ -2.4
PCF11YDR228C YER134CP40081 178 aa0.07□□□□□ -2.4
PCF11YDR228C SER2P42941 309 aa0.07□□□□□ -2.4
PCF11YDR228C YNL033WP53964 284 aa0.07□□□□□ -2.4
PCF11YDR228C VPS71Q03433 280 aa0.07□□□□□ -2.4
PCF11YDR228C FIT1Q04433 528 aa0.07□□□□□ -2.4
PCF11YDR228C FYV12Q08559 129 aa0.07□□□□□ -2.4
PCF11YDR228C YPK2P18961 677 aa0.07□□□□□ -2.4
PCF11YDR228C GSP2P32836 220 aaKnown RBP0.07□□□□□ -2.4
PCF11YDR228C YRB1P41920 201 aaKnown RBP0.07□□□□□ -2.4
PCF11YDR228C YMR099CQ03161 297 aaKnown RBP0.07□□□□□ -2.4
PCF11YDR228C TIR1P10863 254 aa0.06□□□□□ -2.4
PCF11YDR228C TAF14P35189 244 aa0.06□□□□□ -2.4
PCF11YDR228C PAM17P36147 197 aa0.06□□□□□ -2.4
PCF11YDR228C ETR1P38071 380 aa0.06□□□□□ -2.4
PCF11YDR228C TRM5P38793 499 aa0.06□□□□□ -2.4
PCF11YDR228C ERG28P40030 148 aa0.06□□□□□ -2.4
PCF11YDR228C ABP140Q08641 628 aaKnown RBP0.06□□□□□ -2.4
PCF11YDR228C HFA1P32874 2273 aa0.06□□□□□ -2.4
PCF11YDR228C PDS1P40316 373 aaPredicted RBP0.05□□□□□ -2.4
PCF11YDR228C MPM1P40364 252 aa0.05□□□□□ -2.4
PCF11YDR228C GET4Q12125 312 aa0.05□□□□□ -2.4
PCF11YDR228C MDM32Q12171 622 aa0.05□□□□□ -2.4
PCF11YDR228C NCB2Q92317 146 aa0.05□□□□□ -2.4
PCF11YDR228C YDR157WA0A023PZE8 133 aa0.05□□□□□ -2.4
PCF11YDR228C PPA2P28239 310 aa0.05□□□□□ -2.4
PCF11YDR228C ARP3P47117 449 aaKnown RBP0.05□□□□□ -2.4
PCF11YDR228C NAT3Q06504 195 aa0.05□□□□□ -2.4
PCF11YDR228C IDP1P21954 428 aaKnown RBP0.04□□□□□ -2.4
PCF11YDR228C YCR023CP25351 611 aa0.04□□□□□ -2.4
PCF11YDR228C MGT1P26188 188 aa0.04□□□□□ -2.4
PCF11YDR228C YCR087C-AP37263 153 aa0.04□□□□□ -2.4
PCF11YDR228C MTW1P39731 289 aa0.04□□□□□ -2.4
PCF11YDR228C YJR111CP47148 283 aaKnown RBP0.04□□□□□ -2.4
PCF11YDR228C RRP17Q04031 235 aaPredicted RBP0.04□□□□□ -2.4
PCF11YDR228C SNF4P12904 322 aa0.03□□□□□ -2.4
PCF11YDR228C YBL010CP32788 280 aa0.03□□□□□ -2.4
PCF11YDR228C YNL194CP40169 301 aa0.03□□□□□ -2.4
PCF11YDR228C OTU1P43558 301 aa0.03□□□□□ -2.4
PCF11YDR228C YJR015WP47090 510 aa0.03□□□□□ -2.4
PCF11YDR228C YGL235WP53071 178 aa0.03□□□□□ -2.4
PCF11YDR228C YMR253CQ04835 414 aa0.03□□□□□ -2.4
PCF11YDR228C PRM3Q08931 133 aa0.03□□□□□ -2.4
PCF11YDR228C AIM2P39721 246 aa0.03□□□□□ -2.41
PCF11YDR228C YMR315WQ04869 349 aaKnown RBP0.03□□□□□ -2.41
PCF11YDR228C SPS18P32572 300 aa0.02□□□□□ -2.41
PCF11YDR228C SPC25P40014 221 aa0.02□□□□□ -2.41
PCF11YDR228C CWC23P52868 283 aaPredicted RBP0.02□□□□□ -2.41
PCF11YDR228C TMA23Q03525 211 aa0.02□□□□□ -2.41
PCF11YDR228C MBF1O14467 151 aaKnown RBP0.01□□□□□ -2.41
PCF11YDR228C STF2P16965 84 aa0.01□□□□□ -2.41
PCF11YDR228C ASF2P32448 525 aaPredicted RBP0.01□□□□□ -2.41
PCF11YDR228C CUP9P41817 306 aa0.01□□□□□ -2.41
PCF11YDR228C RAD17P48581 401 aa0.01□□□□□ -2.41
PCF11YDR228C YDC1Q02896 317 aa0.01□□□□□ -2.41
PCF11YDR228C FUS2Q05670 677 aa0.01□□□□□ -2.41
PCF11YDR228C YOL014WQ08110 124 aa0.01□□□□□ -2.41
PCF11YDR228C YOR015WQ12169 119 aa0.01□□□□□ -2.41
PCF11YDR228C CBT1P36038 271 aaPredicted RBP0.01□□□□□ -2.41
PCF11YDR228C YKR070WP36151 352 aaKnown RBP0.01□□□□□ -2.41
PCF11YDR228C FMP23P38231 175 aa0.01□□□□□ -2.41
PCF11YDR228C HHY1P39982 102 aa0.01□□□□□ -2.41
PCF11YDR228C ELP6Q04868 273 aa0.01□□□□□ -2.41
PCF11YDR228C KEI1Q06346 221 aa0.01□□□□□ -2.41
PCF11YDR228C ADF1Q2V2Q1 113 aa0.01□□□□□ -2.41
PCF11YDR228C YOL013W-AP0C272 63 aaPredicted RBP0□□□□□ -2.41
PCF11YDR228C RTR1P40084 226 aaPredicted RBP0□□□□□ -2.41
PCF11YDR228C TDA4P47153 279 aa0□□□□□ -2.41
PCF11YDR228C YHP1Q04116 353 aa0□□□□□ -2.41
PCF11YDR228C YML100W-AQ8TGT0 57 aa0□□□□□ -2.41
PCF11YDR228C NHP6BP11633 99 aaKnown RBP-0.01□□□□□ -2.41
PCF11YDR228C STE18P18852 110 aa-0.01□□□□□ -2.41
PCF11YDR228C PRP18P33411 251 aaPredicted RBP-0.01□□□□□ -2.41
PCF11YDR228C IKI1P38874 309 aa-0.01□□□□□ -2.41
PCF11YDR228C CDC33P07260 213 aaKnown RBP-0.01□□□□□ -2.41
PCF11YDR228C MAK31P23059 88 aa-0.01□□□□□ -2.41
PCF11YDR228C YCR001WP25347 104 aa-0.01□□□□□ -2.41
PCF11YDR228C SHB17P36136 271 aaKnown RBP-0.01□□□□□ -2.41
PCF11YDR228C SBH2P52871 88 aa-0.01□□□□□ -2.41
PCF11YDR228C DUR1,2P32528 1835 aaKnown RBP-0.01□□□□□ -2.41
PCF11YDR228C NSE4P43124 402 aa-0.02□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 101.8 ms