RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	YKL063C	P35725	167 aa		3.59	□□□□□ -1.83
RPC53	YDL150W	PRS3	P38689	320 aa	Known RBP	3.59	□□□□□ -1.83
RPC53	YDL150W	YHL037C	P38733	133 aa		3.59	□□□□□ -1.83
RPC53	YDL150W	SYS1	P41544	203 aa		3.59	□□□□□ -1.83
RPC53	YDL150W	OTU1	P43558	301 aa		3.59	□□□□□ -1.83
RPC53	YDL150W	AIM25	P47140	327 aa		3.59	□□□□□ -1.83
RPC53	YDL150W	ARO8	P53090	500 aa	Known RBP	3.59	□□□□□ -1.83
RPC53	YDL150W	TPN1	P53099	579 aa		3.59	□□□□□ -1.83
RPC53	YDL150W	UTP15	Q04305	513 aa	Known RBP	3.59	□□□□□ -1.83
RPC53	YDL150W	HNT1	Q04344	158 aa	Known RBP	3.59	□□□□□ -1.83
RPC53	YDL150W	API2	Q04413	109 aa		3.59	□□□□□ -1.83
RPC53	YDL150W	MRX9	Q07349	420 aa	Known RBP	3.59	□□□□□ -1.83
RPC53	YDL150W	YLR031W	Q07978	186 aa		3.59	□□□□□ -1.83
RPC53	YDL150W	RRS1	Q08746	203 aa	Known RBP	3.59	□□□□□ -1.83
RPC53	YDL150W	HUT1	Q12520	339 aa		3.59	□□□□□ -1.83
RPC53	YDL150W	DYN1	P36022	4092 aa		3.59	□□□□□ -1.83
RPC53	YDL150W	TDH2	P00358	332 aa	Known RBP	3.58	□□□□□ -1.84
RPC53	YDL150W	SPS2	P08459	502 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	PET54	P10834	293 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	URA6	P15700	204 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	CDC50	P25656	391 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	VMA5	P31412	392 aa	Known RBP	3.58	□□□□□ -1.84
RPC53	YDL150W	AIM20	P40451	204 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	YKE4	P40544	346 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	GNA1	P43577	159 aa	Predicted RBP	3.58	□□□□□ -1.84
RPC53	YDL150W	KEG1	P43614	200 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	YHC3	P47040	408 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	UFD1	P53044	361 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	NSA1	P53136	463 aa	Predicted RBP	3.58	□□□□□ -1.84
RPC53	YDL150W	GIM3	P53900	129 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	YDC1	Q02896	317 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	YPR098C	Q06089	161 aa		3.58	□□□□□ -1.84
RPC53	YDL150W	CDC28	P00546	298 aa	Known RBP	3.57	□□□□□ -1.84
RPC53	YDL150W	RPL25	P04456	142 aa	Known RBP	3.57	□□□□□ -1.84
RPC53	YDL150W	RPS23A	P0CX29	145 aa	Known RBP	3.57	□□□□□ -1.84
RPC53	YDL150W	RPS23B	P0CX30	145 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	RFA3	P26755	122 aa	Known RBP	3.57	□□□□□ -1.84
RPC53	YDL150W	FIG1	P38224	298 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	YBR242W	P38331	238 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	YER121W	P40076	114 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	LST7	P53237	242 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	RSM27	P53305	110 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
RPC53	YDL150W	SED1	Q01589	338 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	YMR279C	Q03263	540 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	YDR248C	Q03786	193 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	LIP2	Q06005	328 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	YOR186W	Q08560	144 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	RDI1	Q12434	202 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	SPO24	Q3E752	67 aa		3.57	□□□□□ -1.84
RPC53	YDL150W	YLL053C	P0CD98	152 aa		3.56	□□□□□ -1.84
RPC53	YDL150W	LDS1	P31379	325 aa		3.56	□□□□□ -1.84
RPC53	YDL150W	MRPL3	P36516	390 aa		3.56	□□□□□ -1.84
RPC53	YDL150W	ECM14	P38836	430 aa		3.56	□□□□□ -1.84
RPC53	YDL150W	DIE2	P50076	525 aa		3.56	□□□□□ -1.84
RPC53	YDL150W	YDR114C	Q04597	100 aa		3.56	□□□□□ -1.84
RPC53	YDL150W	MSC3	Q05812	728 aa		3.56	□□□□□ -1.84
RPC53	YDL150W	PIN3	Q06449	215 aa		3.56	□□□□□ -1.84
RPC53	YDL150W	GEP5	Q12393	293 aa		3.56	□□□□□ -1.84
RPC53	YDL150W	UBA3	Q99344	299 aa		3.56	□□□□□ -1.84
RPC53	YDL150W	ZRC1	P20107	442 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	ATG22	P25568	528 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	DAL80	P26343	269 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	IMP1	P28627	190 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	PEX4	P29340	183 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	AGA2	P32781	87 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	FMT1	P32785	401 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	YKL187C	P34231	750 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	PAN3	P36102	679 aa	Predicted RBP	3.55	□□□□□ -1.84
RPC53	YDL150W	MRPL27	P36526	146 aa	Predicted RBP	3.55	□□□□□ -1.84
RPC53	YDL150W	ALG9	P53868	555 aa	Known RBP	3.55	□□□□□ -1.84
RPC53	YDL150W	YPL067C	Q02754	198 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	PRM15	Q03262	622 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	YML018C	Q03730	393 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	MPD1	Q12404	318 aa	Known RBP	3.55	□□□□□ -1.84
RPC53	YDL150W	PET20	Q99373	253 aa		3.55	□□□□□ -1.84
RPC53	YDL150W	RPL39	P04650	51 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	GCN3	P14741	305 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	GRX2	P17695	143 aa	Known RBP	3.54	□□□□□ -1.84
RPC53	YDL150W	SAR1	P20606	190 aa	Known RBP	3.54	□□□□□ -1.84
RPC53	YDL150W	IFM1	P25038	676 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	YCR101C	P25607	182 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	BUD23	P25627	275 aa	Predicted RBP	3.54	□□□□□ -1.84
RPC53	YDL150W	PRS2	P38620	318 aa	Known RBP	3.54	□□□□□ -1.84
RPC53	YDL150W	COS8	P38723	381 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	RMD6	P39975	231 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	MRX5	P47007	382 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	LSM1	P47017	172 aa	Known RBP	3.54	□□□□□ -1.84
RPC53	YDL150W	YGL114W	P53134	725 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	HAL1	Q01766	294 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	CAB5	Q03941	241 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	VBA1	Q04301	562 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	FSH2	Q05015	223 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	UPS1	Q05776	175 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	YOR385W	Q08909	290 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	MED4	Q12343	284 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	ATG40	Q99325	256 aa		3.54	□□□□□ -1.84
RPC53	YDL150W	CCW14	O13547	238 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	STF1	P01098	86 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	RPL23A	P0CX41	137 aa	Known RBP	3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms