RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	IRC23	Q08416	157 aa		1.19	□□□□□ -2.22
UBS1	YBR165W	COA3	Q3E7B2	85 aa		1.19	□□□□□ -2.22
UBS1	YBR165W	COX8	P04039	78 aa		1.18	□□□□□ -2.22
UBS1	YBR165W	SKI6	P46948	246 aa	Predicted RBP	1.18	□□□□□ -2.22
UBS1	YBR165W	YLR460C	P54007	376 aa		1.18	□□□□□ -2.22
UBS1	YBR165W	CDC36	P06100	191 aa	Predicted RBP	1.17	□□□□□ -2.22
UBS1	YBR165W	FIT2	Q08906	153 aa		1.17	□□□□□ -2.22
UBS1	YBR165W	YAR023C	D6VPM8	179 aa		1.16	□□□□□ -2.22
UBS1	YBR165W	YER134C	P40081	178 aa		1.16	□□□□□ -2.22
UBS1	YBR165W	SER2	P42941	309 aa		1.16	□□□□□ -2.22
UBS1	YBR165W	THG1	P53215	237 aa	Known RBP	1.16	□□□□□ -2.22
UBS1	YBR165W	RFA3	P26755	122 aa	Known RBP	1.15	□□□□□ -2.23
UBS1	YBR165W	YPK2	P18961	677 aa		1.14	□□□□□ -2.23
UBS1	YBR165W	YMR099C	Q03161	297 aa	Known RBP	1.14	□□□□□ -2.23
UBS1	YBR165W	YMR295C	Q03559	197 aa		1.14	□□□□□ -2.23
UBS1	YBR165W	YDR391C	Q04170	232 aa		1.14	□□□□□ -2.23
UBS1	YBR165W	FUS2	Q05670	677 aa		1.14	□□□□□ -2.23
UBS1	YBR165W	YPR013C	Q12145	317 aa		1.14	□□□□□ -2.23
UBS1	YBR165W	ASF2	P32448	525 aa	Predicted RBP	1.13	□□□□□ -2.23
UBS1	YBR165W	AIM2	P39721	246 aa		1.13	□□□□□ -2.23
UBS1	YBR165W	ARP3	P47117	449 aa	Known RBP	1.13	□□□□□ -2.23
UBS1	YBR165W	NOP19	P53317	196 aa	Predicted RBP	1.13	□□□□□ -2.23
UBS1	YBR165W	UPS3	Q04006	179 aa		1.13	□□□□□ -2.23
UBS1	YBR165W	MBF1	O14467	151 aa	Known RBP	1.12	□□□□□ -2.23
UBS1	YBR165W	STP22	P25604	385 aa		1.12	□□□□□ -2.23
UBS1	YBR165W	DIG2	Q03373	323 aa	Known RBP	1.12	□□□□□ -2.23
UBS1	YBR165W	BNA7	Q04066	261 aa		1.12	□□□□□ -2.23
UBS1	YBR165W	SHH3	Q04487	196 aa		1.12	□□□□□ -2.23
UBS1	YBR165W	MRPL15	P36523	253 aa		1.11	□□□□□ -2.23
UBS1	YBR165W	ALB1	P47019	175 aa	Predicted RBP	1.11	□□□□□ -2.23
UBS1	YBR165W	RUD3	Q12234	484 aa	Known RBP	1.11	□□□□□ -2.23
UBS1	YBR165W	ARG80	P07249	177 aa		1.1	□□□□□ -2.23
UBS1	YBR165W	UBC8	P28263	218 aa		1.1	□□□□□ -2.23
UBS1	YBR165W	ARO7	P32178	256 aa		1.1	□□□□□ -2.23
UBS1	YBR165W	SFK1	P35735	353 aa		1.1	□□□□□ -2.23
UBS1	YBR165W	PGA2	P53903	129 aa		1.1	□□□□□ -2.23
UBS1	YBR165W	YPR203W	Q08994	102 aa		1.1	□□□□□ -2.23
UBS1	YBR165W	MTW1	P39731	289 aa		1.09	□□□□□ -2.23
UBS1	YBR165W	YNL033W	P53964	284 aa		1.09	□□□□□ -2.23
UBS1	YBR165W	MRS1	P07266	363 aa		1.08	□□□□□ -2.24
UBS1	YBR165W	TIR1	P10863	254 aa		1.08	□□□□□ -2.24
UBS1	YBR165W	SEN2	P16658	377 aa		1.08	□□□□□ -2.24
UBS1	YBR165W	MGT1	P26188	188 aa		1.08	□□□□□ -2.24
UBS1	YBR165W	UGX2	P32772	223 aa		1.08	□□□□□ -2.24
UBS1	YBR165W	YBR242W	P38331	238 aa		1.08	□□□□□ -2.24
UBS1	YBR165W	YMR315W	Q04869	349 aa	Known RBP	1.08	□□□□□ -2.24
UBS1	YBR165W	NAT3	Q06504	195 aa		1.08	□□□□□ -2.24
UBS1	YBR165W	PAM17	P36147	197 aa		1.07	□□□□□ -2.24
UBS1	YBR165W	YOL014W	Q08110	124 aa		1.07	□□□□□ -2.24
UBS1	YBR165W	GSP2	P32836	220 aa	Known RBP	1.06	□□□□□ -2.24
UBS1	YBR165W	RFC4	P40339	323 aa	Known RBP	1.06	□□□□□ -2.24
UBS1	YBR165W	YMR226C	Q05016	267 aa	Known RBP	1.06	□□□□□ -2.24
UBS1	YBR165W	YLR031W	Q07978	186 aa		1.06	□□□□□ -2.24
UBS1	YBR165W	HTB1	P02293	131 aa	Known RBP	1.05	□□□□□ -2.24
UBS1	YBR165W	HTB2	P02294	131 aa		1.05	□□□□□ -2.24
UBS1	YBR165W	TDA4	P47153	279 aa		1.05	□□□□□ -2.24
UBS1	YBR165W	YML100W-A	Q8TGT0	57 aa		1.05	□□□□□ -2.24
UBS1	YBR165W	SNF4	P12904	322 aa		1.04	□□□□□ -2.24
UBS1	YBR165W	IDP1	P21954	428 aa	Known RBP	1.04	□□□□□ -2.24
UBS1	YBR165W	FMP23	P38231	175 aa		1.04	□□□□□ -2.24
UBS1	YBR165W	PDS1	P40316	373 aa	Predicted RBP	1.04	□□□□□ -2.24
UBS1	YBR165W	CUP9	P41817	306 aa		1.04	□□□□□ -2.24
UBS1	YBR165W	YJR111C	P47148	283 aa	Known RBP	1.04	□□□□□ -2.24
UBS1	YBR165W	MET31	Q03081	177 aa		1.04	□□□□□ -2.24
UBS1	YBR165W	YMR253C	Q04835	414 aa		1.04	□□□□□ -2.24
UBS1	YBR165W	YLR036C	Q07986	203 aa		1.04	□□□□□ -2.24
UBS1	YBR165W	GIS3	Q12418	502 aa		1.03	□□□□□ -2.24
UBS1	YBR165W	YCL012C	Q8J0M4	134 aa		1.03	□□□□□ -2.24
UBS1	YBR165W	YHL037C	P38733	133 aa		1.02	□□□□□ -2.25
UBS1	YBR165W	PST2	Q12335	198 aa	Known RBP	1.02	□□□□□ -2.25
UBS1	YBR165W	TAR1	Q8TGM6	124 aa		1.02	□□□□□ -2.25
UBS1	YBR165W	YCR023C	P25351	611 aa		1.01	□□□□□ -2.25
UBS1	YBR165W	SPC25	P40014	221 aa		1.01	□□□□□ -2.25
UBS1	YBR165W	MMS2	P53152	137 aa		1.01	□□□□□ -2.25
UBS1	YBR165W	YNL184C	P53876	108 aa		1.01	□□□□□ -2.25
UBS1	YBR165W	GET4	Q12125	312 aa		1.01	□□□□□ -2.25
UBS1	YBR165W	MAK5	P38112	773 aa	Predicted RBP	1	□□□□□ -2.25
UBS1	YBR165W	RNH1	Q04740	348 aa		1	□□□□□ -2.25
UBS1	YBR165W	AHT1	P29589	182 aa		0.99	□□□□□ -2.25
UBS1	YBR165W	YFL019C	P43576	117 aa		0.99	□□□□□ -2.25
UBS1	YBR165W	VPS71	Q03433	280 aa		0.99	□□□□□ -2.25
UBS1	YBR165W	RRP17	Q04031	235 aa	Predicted RBP	0.99	□□□□□ -2.25
UBS1	YBR165W	MPM1	P40364	252 aa		0.98	□□□□□ -2.25
UBS1	YBR165W	ARO80	Q04052	950 aa		0.98	□□□□□ -2.25
UBS1	YBR165W	ABP140	Q08641	628 aa	Known RBP	0.98	□□□□□ -2.25
UBS1	YBR165W	ADF1	Q2V2Q1	113 aa		0.98	□□□□□ -2.25
UBS1	YBR165W	MRPS17	Q03246	237 aa	Predicted RBP	0.97	□□□□□ -2.25
UBS1	YBR165W	YOR015W	Q12169	119 aa		0.97	□□□□□ -2.25
UBS1	YBR165W	GPI14	P47088	403 aa	Known RBP	0.96	□□□□□ -2.26
UBS1	YBR165W	TMA22	P47089	198 aa	Predicted RBP	0.96	□□□□□ -2.26
UBS1	YBR165W	YBL010C	P32788	280 aa		0.95	□□□□□ -2.26
UBS1	YBR165W	ETR1	P38071	380 aa		0.95	□□□□□ -2.26
UBS1	YBR165W	YFL051C	P43552	160 aa		0.95	□□□□□ -2.26
UBS1	YBR165W	YGL235W	P53071	178 aa		0.95	□□□□□ -2.26
UBS1	YBR165W	CCW12	Q12127	133 aa		0.95	□□□□□ -2.26
UBS1	YBR165W	FMP49	A0A023PZB3	126 aa		0.94	□□□□□ -2.26
UBS1	YBR165W	QCR7	P00128	127 aa		0.94	□□□□□ -2.26
UBS1	YBR165W	RPS24A	P0CX31	135 aa	Known RBP	0.94	□□□□□ -2.26
UBS1	YBR165W	RPS24B	P0CX32	135 aa	Known RBP	0.94	□□□□□ -2.26
UBS1	YBR165W	STF2	P16965	84 aa		0.94	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 99.5 ms